Information report for HPA1
Gene Details
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Functional Descriptions
- In a further feeding assay with exogenous glutathione (GSH), a non-enzymatic antioxidant that consumes H2O2, the H2O2 accumulation and leaf senescence phenotypes of HPA1 were obviously compensated.
- Taken together, our findings suggest that the accumulation of H2O2 in HPA1 may be mediated by an altered folate status and redox homeostasis, subsequently triggering leaf senescence.
- Proteomics and enzyme activity analyses further revealed that mitochondria oxidative phosphorylation complex I and complex V were differentially expressed in HPA1, which was consistent with the H2O2 accumulation in HPA1.
- Map-based cloning revealed that HPA1 encodes a tetrahydrofolate deformylase, and its deficiency led to the accumulation of tetrahydrofolate, 5-formyl tetrahydrofolate and 10-formyl tetrahydrofolate, in contrast, a decrease in 5,10-methenyl-tetrahydrofolate.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q10T42
- EMBL: AK060329, AK104164, AP014959
- AlphaFoldDB: Q10T42
- EnsemblPlants: Os03t0102100-02
- Gramene: Os03t0102100-02
- Orthologous matrix: QILNIHH
- InterPro: IPR002376, IPR004810, IPR036477
- PANTHER: PTHR42706, PTHR42706:SF1
- SUPFAM: SSF53328, SSF55021
- Gene3D: 3.30.70.260, 3.40.50.170
- OrthoDB: Q10T42
- SWISS-MODEL: Q10T42
- Conserved Domain Database: cd04875, cd08648
- eggNOG: KOG3076
Sequences
cDNA Sequence
- >LOC_Os03g01222.1
GAGGGGATGGATACTACTCATACATCCATCCTTCTCTCTTTCTGTATCCATCCCGCTCTCTCTCTCTCTCGACGAGAGAGAGAAAGTGCGAAGATATGCTTTCCGTCGCCCGCCGGCCCCTCTCCGCCGCCGTCCCCGTCGGCAACCTCCTCGGCATCCACCTCTTCCAATGCCCTGACACGGTGGGCATTGTGGCGCGGCTGTCTGAGTGCATCGCCTCGCGTGGTGGCAACATCCACAGTGTCGATGTCTTTGTCCCTGACGACAAACCCGTCTTCTACTCCCGTAGTGAGTTTACCTACAATCCCATGCTATGGCCGCGCGATGTGCTTCGCACCGACTTCCTCAATCTGTCACAACACTTCAGCGCACAAAGATCTACTGTTCGAGTCCCTGATCTTGACCCGAAATACAAGATATCTGTACTCGCTTCGAAGCAGGATCATTGTTTGTTTGACTTGCTCTATAGATGGCAAGAGGGAAGGCTTCCGGTTGACATCAATTGTGTCATAAGCAACCATGATCGACTTAAAGATAACCATGTCAGACGTTTCCTTGAGAGACATGGGATCCCCTATCATTACCTACCGACAAGCCCAGGAAATAAAAGAGAGCAAGAGATTTTAGAATTGGTTCAAGGTACCGATTTTGTGGTACTGGCAAGATATATGCAGATATTATCTGAAGGCTTTCTCAAGGCTTATGGCAAAGATATTATTAACATCCATCATGGTCTTCTTCCCTCATTTAAGGGAGGGAATCCTTCGAGACAGGCCTTCAACGCTGGAGTAAAATTGATCGGCGCAACCAGCCATTTTGTTACCCCAGAACTTGATGCTGGCCCAATCATTGAGCAGATGGTTGAACGGGTGTCCCACAGAGACACGCTACAGAGCTTTGTGGTGAAATCTGAGAACCTAGAGAAGCAGTGCCTAGCAGAAGCTATAAAGTCGTACTGTGAGCTCCGTGTGCTACCATATGAATTGAAGAAGACAGTAGTGTTCTGATATCTTTTGAAGGAAGCGATTTTGTTTGTTTGTTTTTATTTGTTGATAAGAGGAAATTACTACAGTACAAAATTTTGTGGTGTTGATTGCTTTGGTGATAAGGAGGTGGGTGTGTGGGCGTGGCTGGACAGTGCATTTTGTAATTGATTGAGTATAACAATACTCCAAAGCAAATAAAATGATAATGCATAATAGTAGTAATTGGTATG - >LOC_Os03g01222.4
GAGGGGATGGATACTACTCATACATCCATCCTTCTCTCTTTCTGTATCCATCCCGCTCTCTCTCTCTCTCGACGAGAGAGAGAAAGTGCGAAGATATGCTTTCCGTCGCCCGCCGGCCCCTCTCCGCCGCCGTCCCCGTCGGCAACCTCCTCGGCATCCACCTCTTCCAATGCCCTGACACGGTGGGCATTGTGGCGCGGCTGTCTGAGTGCATCGCCTCGCGTGGTGGCAACATCCACAGTGTCGATGTCTTTGTCCCTGACGACAAACCCGTCTTCTACTCCCGTAGTGAGTTTACCTACAATCCCATGCTATGGCCGCGCGATGTGCTTCGCACCGACTTCCTCAATCTGTCACAACACTTCAGCGCACAAAGATCTACTGTTCGAGTCCCTGATCTTGACCCGAAATACAAGATATCTGTACTCGCTTCGAAGCAGGATCATTGTTTGTTTGACTTGCTCTATAGATGGCAAGAGGGAAGGCTTCCGGTTGACATCAATTGTGTCATAAGCAACCATGATCGACTTAAAGATAACCATGTCAGACGTTTCCTTGAGAGACATGGGATCCCCTATCATTACCTACCGACAAGCCCAGGAAATAAAAGAGAGCAAGAGATTTTAGAATTGGTTCAAGGTACCGATTTTGTGGTACTGGCAAGATATATGCAGATATTATCTGAAGGCTTTCTCAAGGCTTATGGCAAAGATATTATTAACATCCATCATGGTCTTCTTCCCTCATTTAAGGGAGGGAATCCTTCGAGACAGGCCTTCAACGCTGGAGTAAAATTGATCGGCGCAACCAGCCATTTTGTTACCCCAGAACTTGATGCTGGCCCAATCATTGAGCAGATGGTTGAACGGGTGTCCCACAGAGACACGCTACAGAGCTTTGTGGTGAAATCTGAGAACCTAGAGAAGCAGTGCCTAGCAGAAGCTATAAAGTCGTACTGTGAGCTCCGTGTGCTACCATATGAATTGAAGAAGACAGTAGTGTTCTGATATCTTTTGAAGGAAGCGATTTTGTTTGTTTGTTTTTATTTGTTGATAAGAGGAAATTACTACAGTACAAAATTTTGTGGTGTTGATTGCTTTGGTGATAAGGAGGTGGGTGTGTGGGCGTGGCTGGACAGTGCATTTTGTAATTGATTGAGTATAACAATACTCCAAAGCAAATAAAATGATAATGCATAATAGTAGTAATTGGTATG - >LOC_Os03g01222.3
GAGGGGATGGATACTACTCATACATCCATCCTTCTCTCTTTCTGTATCCATCCCGCTCTCTCTCTCTCTCGACGAGAGAGAGAAAGTGCGAAGATATGCTTTCCGTCGCCCGCCGGCCCCTCTCCGCCGCCGTCCCCGTCGGCAACCTCCTCGGCATCCACCTCTTCCAATGCCCTGACACGGTGGGCATTGTGGCGCGGCTGTCTGAGTGCATCGCCTCGCGTGGTGGCAACATCCACAGTGTCGATGTCTTTGTCCCTGACGACAAACCCGTCTTCTACTCCCGTAGTGAGTTTACCTACAATCCCATGCTATGGCCGCGCGATGTGCTTCGCACCGACTTCCTCAATCTGTCACAACACTTCAGCGCACAAAGATCTACTGTTCGAGTCCCTGATCTTGACCCGAAATACAAGATATCTGTACTCGCTTCGAAGCAGGATCATTGTTTGTTTGACTTGCTCTATAGATGGCAAGAGGGAAGGCTTCCGGTTGACATCAATTGTGTCATAAGCAACCATGATCGACTTAAAGATAACCATGTCAGACGTTTCCTTGAGAGACATGGGATCCCCTATCATTACCTACCGACAAGCCCAGGAAATAAAAGAGAGCAAGAGATTTTAGAATTGGTTCAAGGTACCGATTTTGTGGTACTGGCAAGATATATGCAGATATTATCTGAAGGCTTTCTCAAGGCTTATGGCAAAGATATTATTAACATCCATCATGGTCTTCTTCCCTCATTTAAGGGAGGGAATCCTTCGAGACAGGCCTTCAACGCTGGAGTAAAATTGATCGGCGCAACCAGCCATTTTGTTACCCCAGAACTTGATGCTGGCCCAATCATTGAGCAGATGGTTGAACGGGTGTCCCACAGAGACACGCTACAGAGCTTTGTGGTGAAATCTGAGAACCTAGAGAAGCAGTGCCTAGCAGAAGCTATAAAGTCGTACTGTGAGCTCCGTGTGCTACCATATGAATTGAAGAAGACAGTAGTGTTCTGATATCTTTTGAAGGAAGCGATTTTGTTTGTTTGTTTTTATTTGTTGATAAGAGGAAATTACTACAGTACAAAATTTTGTGGTGTTGATTGCTTTGGTGATAAGGAGGTGGGTGTGTGGGCGTGGCTGGACAGTGCATTTTGTAATTGATTGAGTATAACAATACTCCAAAGCAAATAAAATGATAATGCATAATAGTAGTAATTGGTATG - >LOC_Os03g01222.2
GAGGGGATGGATACTACTCATACATCCATCCTTCTCTCTTTCTGTATCCATCCCGCTCTCTCTCTCTCTCGACGAGAGAGAGAAAGTGCGAAGATATGCTTTCCGTCGCCCGCCGGCCCCTCTCCGCCGCCGTCCCCGTCGGCAACCTCCTCGGCATCCACCTCTTCCAATGCCCTGACACGGTGGGCATTGTGGCGCGGCTGTCTGAGTGCATCGCCTCGCGTGGTGGCAACATCCACAGTGTCGATGTCTTTGTCCCTGACGACAAACCCGTCTTCTACTCCCGTAGTGAGTTTACCTACAATCCCATGCTATGGCCGCGCGATGTGCTTCGCACCGACTTCCTCAATCTGTCACAACACTTCAGCGCACAAAGATCTACTGTTCGAGTCCCTGATCTTGACCCGAAATACAAGATATCTGTACTCGCTTCGAAGCAGGATCATTGTTTGTTTGACTTGCTCTATAGATGGCAAGAGGGAAGGCTTCCGGTTGACATCAATTGTGTCATAAGCAACCATGATCGACTTAAAGATAACCATGTCAGACGTTTCCTTGAGAGACATGGGATCCCCTATCATTACCTACCGACAAGCCCAGGAAATAAAAGAGAGCAAGAGATTTTAGAATTGGTTCAAGGTACCGATTTTGTGGTACTGGCAAGATATATGCAGATATTATCTGAAGGCTTTCTCAAGGCTTATGGCAAAGATATTATTAACATCCATCATGGTCTTCTTCCCTCATTTAAGGGAGGGAATCCTTCGAGACAGGCCTTCAACGCTGGAGTAAAATTGATCGGCGCAACCAGCCATTTTGTTACCCCAGAACTTGATGCTGGCCCAATCATTGAGCAGATGGTTGAACGGGTGTCCCACAGAGACACGCTACAGAGCTTTGTGGTGAAATCTGAGAACCTAGAGAAGCAGTGCCTAGCAGAAGCTATAAAGTCGTACTGTGAGCTCCGTGTGCTACCATATGAATTGAAGAAGACAGTAGTGTTCTGATATCTTTTGAAGGAAGCGATTTTGTTTGTTTGTTTTTATTTGTTGATAAGAGGAAATTACTACAGTACAAAATTTTGTGGTGTTGATTGCTTTGGTGATAAGGAGGTGGGTGTGTGGGCGTGGCTGGACAGTGCATTTTGTAATTGATTGAGTATAACAATACTCCAAAGCAAATAAAATGATAATGCATAATAGTAGTAATTGGTATG
CDS Sequence
- >LOC_Os03g01222.1
ATGCTTTCCGTCGCCCGCCGGCCCCTCTCCGCCGCCGTCCCCGTCGGCAACCTCCTCGGCATCCACCTCTTCCAATGCCCTGACACGGTGGGCATTGTGGCGCGGCTGTCTGAGTGCATCGCCTCGCGTGGTGGCAACATCCACAGTGTCGATGTCTTTGTCCCTGACGACAAACCCGTCTTCTACTCCCGTAGTGAGTTTACCTACAATCCCATGCTATGGCCGCGCGATGTGCTTCGCACCGACTTCCTCAATCTGTCACAACACTTCAGCGCACAAAGATCTACTGTTCGAGTCCCTGATCTTGACCCGAAATACAAGATATCTGTACTCGCTTCGAAGCAGGATCATTGTTTGTTTGACTTGCTCTATAGATGGCAAGAGGGAAGGCTTCCGGTTGACATCAATTGTGTCATAAGCAACCATGATCGACTTAAAGATAACCATGTCAGACGTTTCCTTGAGAGACATGGGATCCCCTATCATTACCTACCGACAAGCCCAGGAAATAAAAGAGAGCAAGAGATTTTAGAATTGGTTCAAGGTACCGATTTTGTGGTACTGGCAAGATATATGCAGATATTATCTGAAGGCTTTCTCAAGGCTTATGGCAAAGATATTATTAACATCCATCATGGTCTTCTTCCCTCATTTAAGGGAGGGAATCCTTCGAGACAGGCCTTCAACGCTGGAGTAAAATTGATCGGCGCAACCAGCCATTTTGTTACCCCAGAACTTGATGCTGGCCCAATCATTGAGCAGATGGTTGAACGGGTGTCCCACAGAGACACGCTACAGAGCTTTGTGGTGAAATCTGAGAACCTAGAGAAGCAGTGCCTAGCAGAAGCTATAAAGTCGTACTGTGAGCTCCGTGTGCTACCATATGAATTGAAGAAGACAGTAGTGTTCTGA - >LOC_Os03g01222.4
ATGCTTTCCGTCGCCCGCCGGCCCCTCTCCGCCGCCGTCCCCGTCGGCAACCTCCTCGGCATCCACCTCTTCCAATGCCCTGACACGGTGGGCATTGTGGCGCGGCTGTCTGAGTGCATCGCCTCGCGTGGTGGCAACATCCACAGTGTCGATGTCTTTGTCCCTGACGACAAACCCGTCTTCTACTCCCGTAGTGAGTTTACCTACAATCCCATGCTATGGCCGCGCGATGTGCTTCGCACCGACTTCCTCAATCTGTCACAACACTTCAGCGCACAAAGATCTACTGTTCGAGTCCCTGATCTTGACCCGAAATACAAGATATCTGTACTCGCTTCGAAGCAGGATCATTGTTTGTTTGACTTGCTCTATAGATGGCAAGAGGGAAGGCTTCCGGTTGACATCAATTGTGTCATAAGCAACCATGATCGACTTAAAGATAACCATGTCAGACGTTTCCTTGAGAGACATGGGATCCCCTATCATTACCTACCGACAAGCCCAGGAAATAAAAGAGAGCAAGAGATTTTAGAATTGGTTCAAGGTACCGATTTTGTGGTACTGGCAAGATATATGCAGATATTATCTGAAGGCTTTCTCAAGGCTTATGGCAAAGATATTATTAACATCCATCATGGTCTTCTTCCCTCATTTAAGGGAGGGAATCCTTCGAGACAGGCCTTCAACGCTGGAGTAAAATTGATCGGCGCAACCAGCCATTTTGTTACCCCAGAACTTGATGCTGGCCCAATCATTGAGCAGATGGTTGAACGGGTGTCCCACAGAGACACGCTACAGAGCTTTGTGGTGAAATCTGAGAACCTAGAGAAGCAGTGCCTAGCAGAAGCTATAAAGTCGTACTGTGAGCTCCGTGTGCTACCATATGAATTGAAGAAGACAGTAGTGTTCTGA - >LOC_Os03g01222.3
ATGCTTTCCGTCGCCCGCCGGCCCCTCTCCGCCGCCGTCCCCGTCGGCAACCTCCTCGGCATCCACCTCTTCCAATGCCCTGACACGGTGGGCATTGTGGCGCGGCTGTCTGAGTGCATCGCCTCGCGTGGTGGCAACATCCACAGTGTCGATGTCTTTGTCCCTGACGACAAACCCGTCTTCTACTCCCGTAGTGAGTTTACCTACAATCCCATGCTATGGCCGCGCGATGTGCTTCGCACCGACTTCCTCAATCTGTCACAACACTTCAGCGCACAAAGATCTACTGTTCGAGTCCCTGATCTTGACCCGAAATACAAGATATCTGTACTCGCTTCGAAGCAGGATCATTGTTTGTTTGACTTGCTCTATAGATGGCAAGAGGGAAGGCTTCCGGTTGACATCAATTGTGTCATAAGCAACCATGATCGACTTAAAGATAACCATGTCAGACGTTTCCTTGAGAGACATGGGATCCCCTATCATTACCTACCGACAAGCCCAGGAAATAAAAGAGAGCAAGAGATTTTAGAATTGGTTCAAGGTACCGATTTTGTGGTACTGGCAAGATATATGCAGATATTATCTGAAGGCTTTCTCAAGGCTTATGGCAAAGATATTATTAACATCCATCATGGTCTTCTTCCCTCATTTAAGGGAGGGAATCCTTCGAGACAGGCCTTCAACGCTGGAGTAAAATTGATCGGCGCAACCAGCCATTTTGTTACCCCAGAACTTGATGCTGGCCCAATCATTGAGCAGATGGTTGAACGGGTGTCCCACAGAGACACGCTACAGAGCTTTGTGGTGAAATCTGAGAACCTAGAGAAGCAGTGCCTAGCAGAAGCTATAAAGTCGTACTGTGAGCTCCGTGTGCTACCATATGAATTGAAGAAGACAGTAGTGTTCTGA - >LOC_Os03g01222.2
ATGCTTTCCGTCGCCCGCCGGCCCCTCTCCGCCGCCGTCCCCGTCGGCAACCTCCTCGGCATCCACCTCTTCCAATGCCCTGACACGGTGGGCATTGTGGCGCGGCTGTCTGAGTGCATCGCCTCGCGTGGTGGCAACATCCACAGTGTCGATGTCTTTGTCCCTGACGACAAACCCGTCTTCTACTCCCGTAGTGAGTTTACCTACAATCCCATGCTATGGCCGCGCGATGTGCTTCGCACCGACTTCCTCAATCTGTCACAACACTTCAGCGCACAAAGATCTACTGTTCGAGTCCCTGATCTTGACCCGAAATACAAGATATCTGTACTCGCTTCGAAGCAGGATCATTGTTTGTTTGACTTGCTCTATAGATGGCAAGAGGGAAGGCTTCCGGTTGACATCAATTGTGTCATAAGCAACCATGATCGACTTAAAGATAACCATGTCAGACGTTTCCTTGAGAGACATGGGATCCCCTATCATTACCTACCGACAAGCCCAGGAAATAAAAGAGAGCAAGAGATTTTAGAATTGGTTCAAGGTACCGATTTTGTGGTACTGGCAAGATATATGCAGATATTATCTGAAGGCTTTCTCAAGGCTTATGGCAAAGATATTATTAACATCCATCATGGTCTTCTTCCCTCATTTAAGGGAGGGAATCCTTCGAGACAGGCCTTCAACGCTGGAGTAAAATTGATCGGCGCAACCAGCCATTTTGTTACCCCAGAACTTGATGCTGGCCCAATCATTGAGCAGATGGTTGAACGGGTGTCCCACAGAGACACGCTACAGAGCTTTGTGGTGAAATCTGAGAACCTAGAGAAGCAGTGCCTAGCAGAAGCTATAAAGTCGTACTGTGAGCTCCGTGTGCTACCATATGAATTGAAGAAGACAGTAGTGTTCTGA
Protein Sequence
- >LOC_Os03g01222.1
MLSVARRPLSAAVPVGNLLGIHLFQCPDTVGIVARLSECIASRGGNIHSVDVFVPDDKPVFYSRSEFTYNPMLWPRDVLRTDFLNLSQHFSAQRSTVRVPDLDPKYKISVLASKQDHCLFDLLYRWQEGRLPVDINCVISNHDRLKDNHVRRFLERHGIPYHYLPTSPGNKREQEILELVQGTDFVVLARYMQILSEGFLKAYGKDIINIHHGLLPSFKGGNPSRQAFNAGVKLIGATSHFVTPELDAGPIIEQMVERVSHRDTLQSFVVKSENLEKQCLAEAIKSYCELRVLPYELKKTVVF* - >LOC_Os03g01222.4
MLSVARRPLSAAVPVGNLLGIHLFQCPDTVGIVARLSECIASRGGNIHSVDVFVPDDKPVFYSRSEFTYNPMLWPRDVLRTDFLNLSQHFSAQRSTVRVPDLDPKYKISVLASKQDHCLFDLLYRWQEGRLPVDINCVISNHDRLKDNHVRRFLERHGIPYHYLPTSPGNKREQEILELVQGTDFVVLARYMQILSEGFLKAYGKDIINIHHGLLPSFKGGNPSRQAFNAGVKLIGATSHFVTPELDAGPIIEQMVERVSHRDTLQSFVVKSENLEKQCLAEAIKSYCELRVLPYELKKTVVF* - >LOC_Os03g01222.3
MLSVARRPLSAAVPVGNLLGIHLFQCPDTVGIVARLSECIASRGGNIHSVDVFVPDDKPVFYSRSEFTYNPMLWPRDVLRTDFLNLSQHFSAQRSTVRVPDLDPKYKISVLASKQDHCLFDLLYRWQEGRLPVDINCVISNHDRLKDNHVRRFLERHGIPYHYLPTSPGNKREQEILELVQGTDFVVLARYMQILSEGFLKAYGKDIINIHHGLLPSFKGGNPSRQAFNAGVKLIGATSHFVTPELDAGPIIEQMVERVSHRDTLQSFVVKSENLEKQCLAEAIKSYCELRVLPYELKKTVVF* - >LOC_Os03g01222.2
MLSVARRPLSAAVPVGNLLGIHLFQCPDTVGIVARLSECIASRGGNIHSVDVFVPDDKPVFYSRSEFTYNPMLWPRDVLRTDFLNLSQHFSAQRSTVRVPDLDPKYKISVLASKQDHCLFDLLYRWQEGRLPVDINCVISNHDRLKDNHVRRFLERHGIPYHYLPTSPGNKREQEILELVQGTDFVVLARYMQILSEGFLKAYGKDIINIHHGLLPSFKGGNPSRQAFNAGVKLIGATSHFVTPELDAGPIIEQMVERVSHRDTLQSFVVKSENLEKQCLAEAIKSYCELRVLPYELKKTVVF*