Gene Details:
- MSU gene ID: LOC_Os02g55080
- RAPdb gene ID: Os02g0793900
- Gene Symbol: HDR1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The HDR1 mutant exhibits an early flowering phenotype under natural LD in a paddy field in Beijing, China (39°54’N, 116°23’E), as well as under LD but not SD in a growth chamber, indicating that HDR1 may functionally regulate flowering time via the photoperiod-dependent pathway.
- HDR1 encodes a nuclear protein that is most active in leaves and floral organs and exhibits a typical diurnal expression pattern.
- The Oryza sativa Regulator HDR1 Associates with the Kinase OsK4 to Control Photoperiodic Flowering.
Function-related keywords:
- growth , floral , floral-organ , R-protein , flowering-time , Kinase
Literature:
- The Oryza sativa Regulator HDR1 Associates with the Kinase OsK4 to Control Photoperiodic Flowering . DOI: 10.1371/journal.pgen.1005927 ; PMID: 26954091
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os02g55080.1
GAAGGCACGCGAGACGGTCAAGAAACAAACGGGAGTTGCTTCCAAGGCGAAGGCGACCCGGTGACCCACCTCTCCTCTCTCTTCTCGCCGTCCTAGCAAGTAGCAACCCTCCTCAGCCAAGAACCACAAGATAACGCAACTCACAAGGCACGCACCCATAGATTGATAGAGAGAGGGACAGAGAGAGAGAGAGATAGAGCTCAGGTTGCAAGCAGATAGAACGGGTCCAGGTAGCTTCGCAATCAAGAAGAAGAAGAAGAGTGAAGGAGGAGGAGGAGCAAGAGCAAGCCATGGAGGAGCCGGCCTCGGCTGATCCCCCGCGGATTTTCTGGAAGTCGAGGAGGAGATCAGCCTCAGCCAATGGCCGGAGCTTGCAACAAGAACTTAACAAAGAGGCTGCTGATGAACAACTGAACAATCAGGCTCATGAAGAGGCCATGAAAATAGATGATGCAAATGCAGTAAGTACTGACGACGATGTTCATCCAGATCCAAAAGCTAACTTATCTGAGAAGAGGAAGGCGCTGTTTGAGCCTTTGGAACCAATCAACGGCAAGCGCAGTTCTGCTGAAATGTTGCTCCCACCACCAGACTTTGAGCCCGCGTCATATCCCAAGGGATGGCTGGTTGGCAAGAAACGCAAGCTTGTGAATGTTGATGTGGTGGAGAGCATGAGGAGGATAGCAATCCAAGAAATGAACAGAAAGGACCGTGAGATCAATGGCCTGAATGAACAGTTGGAAGAAGACTCCCGAGTGCTTGAGCTTCTACAAAAGCAGCTCGCAGATGAGCGTAAGAAGCGAACGGAGATAGAGAAGGAAAATTCCATGCTTCATGAGCAGGTATCTATGCTGATGAACATGCTCGATGAAAATGAAGCCTTTGATGAGGAGGGAGAAGCACCACCACCTGATACCTTATAGGCTTAGATTAAGTAATATTATCAAGGTTCCAAGTTCTACACATCTTCGGATACCAGTTTAAGAGTATTCCCAGATGTCTTTATCTTGTGTAAAATTCAATTTATCTTATTTTATTTTATGGCTTGTGTGTAGATGAAGGGGTTCTGTTTGCTGTACCTATTTGTTTCTAGGCTGCAAGTGTATGCGAGATGCTTGTAATGTATTCTATTTAAATGCAAGTGTTTACATGTTATAAGAGCTCTTGCAAGACTCCTTTTCCTTGCATGAGCTCTTTTGCT
CDS Sequence
- >LOC_Os02g55080.1
ATGGAGGAGCCGGCCTCGGCTGATCCCCCGCGGATTTTCTGGAAGTCGAGGAGGAGATCAGCCTCAGCCAATGGCCGGAGCTTGCAACAAGAACTTAACAAAGAGGCTGCTGATGAACAACTGAACAATCAGGCTCATGAAGAGGCCATGAAAATAGATGATGCAAATGCAGTAAGTACTGACGACGATGTTCATCCAGATCCAAAAGCTAACTTATCTGAGAAGAGGAAGGCGCTGTTTGAGCCTTTGGAACCAATCAACGGCAAGCGCAGTTCTGCTGAAATGTTGCTCCCACCACCAGACTTTGAGCCCGCGTCATATCCCAAGGGATGGCTGGTTGGCAAGAAACGCAAGCTTGTGAATGTTGATGTGGTGGAGAGCATGAGGAGGATAGCAATCCAAGAAATGAACAGAAAGGACCGTGAGATCAATGGCCTGAATGAACAGTTGGAAGAAGACTCCCGAGTGCTTGAGCTTCTACAAAAGCAGCTCGCAGATGAGCGTAAGAAGCGAACGGAGATAGAGAAGGAAAATTCCATGCTTCATGAGCAGGTATCTATGCTGATGAACATGCTCGATGAAAATGAAGCCTTTGATGAGGAGGGAGAAGCACCACCACCTGATACCTTATAG
Protein Sequence
- >LOC_Os02g55080.1
MEEPASADPPRIFWKSRRRSASANGRSLQQELNKEAADEQLNNQAHEEAMKIDDANAVSTDDDVHPDPKANLSEKRKALFEPLEPINGKRSSAEMLLPPPDFEPASYPKGWLVGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLEEDSRVLELLQKQLADERKKRTEIEKENSMLHEQVSMLMNMLDENEAFDEEGEAPPPDTL*