Gene Details:

Functional Descriptions:

  • Natural variation in the promoter of TGW2 determines grain width and weight in rice.
  • <U+2022> A single nucleotide polymorphism (SNP) variation at 1818<U+00A0>bp upstream of TGW2 is responsible for its different expression, leading to alteration in grain width and weight by influencing cell proliferation and expansion in glumes.
  • TGW2 interacts with KRP1, a regulator of cell cycle in plant, to negatively regulate grain width and weight.
  • Genetic diversity analysis of TGW2 in 141 rice accessions revealed it as a breeding target in a selective sweep region.
  • The sequence variation and candidate grain shape-related gene TGW2 were identified through Fst and sweep selective analysis.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os02g52550.1
    GGTCTTGCCTTCCGCTTTAGCAGAGGCATAAACAAAGGTCTGTATTCCCAAGCAATGTATCCCTCCGCCCCTCCCGACGCGTATAACAAGTACAGCGCCGGTGCTCCACCGACGGCGCCGCCGCCGGCAACGTACCAGCTGCCGACGATGAACACCCCACGCACCGGCGGCGGGCTGACGCGATGGTCCACCGGCCTTTTCCACTGCATGGACGATCCCGGAAACTGTCTCATCACATGCGTGTGCCCCTGCATCACCTTTGGGCAGGTCGCTGACATCGTGGACAAGGGCACCTGCCCATGCCTCGCGAGCGGGACGGCTTACGCGCTCCTCTGCGCGTCGGGGATGGGGTGCCTGTACTCGTGCTTCTACCGGTCCAAGATGAGGGCTCAGTTCGACCTGGACGAAGGGGATTGCCCCGATTTCCTCGTCCATTTCTGCTGCGAGTACTGCGCGCTGTGCCAGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACTTGGGGATCGGTTGGGCTGCCAATGTGGACAGGCAGAGGCGAGGCGTCACCGGAGCGTCGGTGATGGGAGCTCCTGGCGTCCCGGTCGGCATGATGAGGTAGACGAAGATGGCGAACGCGAAATGGTGCGCTTTTGTGTTCTTGTGTTGCAATATGTTCTCTGTGGTTTTCATTTGGAGATCACTGCCTATTTCATGTATCGTATACTCCTATTTAGCTTGATTTGTTGGGTTTCATGTAATATATGACGCATTCAGAAGTGTTGTGACTTGTCAAGACACAGTAATGGGATTTGGTGAGAGATCGAATGAGCACATTGGAATTAGGCTGTTATTCTTCCTCCTCCTTTCCCAACTAATATATCTCGCACGCACACACTTTATAAACTGCTAAACGTCATTTTTTTAATAACAATTTATATGAAAGATGCTTTCAAAATAA
CDS Sequence
  • >LOC_Os02g52550.1
    ATGTATCCCTCCGCCCCTCCCGACGCGTATAACAAGTACAGCGCCGGTGCTCCACCGACGGCGCCGCCGCCGGCAACGTACCAGCTGCCGACGATGAACACCCCACGCACCGGCGGCGGGCTGACGCGATGGTCCACCGGCCTTTTCCACTGCATGGACGATCCCGGAAACTGTCTCATCACATGCGTGTGCCCCTGCATCACCTTTGGGCAGGTCGCTGACATCGTGGACAAGGGCACCTGCCCATGCCTCGCGAGCGGGACGGCTTACGCGCTCCTCTGCGCGTCGGGGATGGGGTGCCTGTACTCGTGCTTCTACCGGTCCAAGATGAGGGCTCAGTTCGACCTGGACGAAGGGGATTGCCCCGATTTCCTCGTCCATTTCTGCTGCGAGTACTGCGCGCTGTGCCAGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACTTGGGGATCGGTTGGGCTGCCAATGTGGACAGGCAGAGGCGAGGCGTCACCGGAGCGTCGGTGATGGGAGCTCCTGGCGTCCCGGTCGGCATGATGAGGTAG
Protein Sequence
  • >LOC_Os02g52550.1
    MYPSAPPDAYNKYSAGAPPTAPPPATYQLPTMNTPRTGGGLTRWSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYALLCASGMGCLYSCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVDRQRRGVTGASVMGAPGVPVGMMR*