Gene Details:
- MSU gene ID: LOC_Os02g52550
- RAPdb gene ID: Os02g0763000
- Gene Symbol: TGW2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Natural variation in the promoter of TGW2 determines grain width and weight in rice.
- <U+2022> A single nucleotide polymorphism (SNP) variation at 1818<U+00A0>bp upstream of TGW2 is responsible for its different expression, leading to alteration in grain width and weight by influencing cell proliferation and expansion in glumes.
- TGW2 interacts with KRP1, a regulator of cell cycle in plant, to negatively regulate grain width and weight.
- Genetic diversity analysis of TGW2 in 141 rice accessions revealed it as a breeding target in a selective sweep region.
- The sequence variation and candidate grain shape-related gene TGW2 were identified through Fst and sweep selective analysis.
Function-related keywords:
Literature:
- Natural variation in the promoter of TGW2 determines grain width and weight in rice . DOI: 10.1111/nph.16540 ; PMID: 32167575
- Whole Genome Resequencing of 20 Accessions of Rice Landraces Reveals Javanica Genomic Structure Variation and Allelic Genotypes of a Grain Weight Gene TGW2 . DOI: 10.3389/fpls.2022.857435 ; PMID: 35548287
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os02g52550.1
GGTCTTGCCTTCCGCTTTAGCAGAGGCATAAACAAAGGTCTGTATTCCCAAGCAATGTATCCCTCCGCCCCTCCCGACGCGTATAACAAGTACAGCGCCGGTGCTCCACCGACGGCGCCGCCGCCGGCAACGTACCAGCTGCCGACGATGAACACCCCACGCACCGGCGGCGGGCTGACGCGATGGTCCACCGGCCTTTTCCACTGCATGGACGATCCCGGAAACTGTCTCATCACATGCGTGTGCCCCTGCATCACCTTTGGGCAGGTCGCTGACATCGTGGACAAGGGCACCTGCCCATGCCTCGCGAGCGGGACGGCTTACGCGCTCCTCTGCGCGTCGGGGATGGGGTGCCTGTACTCGTGCTTCTACCGGTCCAAGATGAGGGCTCAGTTCGACCTGGACGAAGGGGATTGCCCCGATTTCCTCGTCCATTTCTGCTGCGAGTACTGCGCGCTGTGCCAGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACTTGGGGATCGGTTGGGCTGCCAATGTGGACAGGCAGAGGCGAGGCGTCACCGGAGCGTCGGTGATGGGAGCTCCTGGCGTCCCGGTCGGCATGATGAGGTAGACGAAGATGGCGAACGCGAAATGGTGCGCTTTTGTGTTCTTGTGTTGCAATATGTTCTCTGTGGTTTTCATTTGGAGATCACTGCCTATTTCATGTATCGTATACTCCTATTTAGCTTGATTTGTTGGGTTTCATGTAATATATGACGCATTCAGAAGTGTTGTGACTTGTCAAGACACAGTAATGGGATTTGGTGAGAGATCGAATGAGCACATTGGAATTAGGCTGTTATTCTTCCTCCTCCTTTCCCAACTAATATATCTCGCACGCACACACTTTATAAACTGCTAAACGTCATTTTTTTAATAACAATTTATATGAAAGATGCTTTCAAAATAA
CDS Sequence
- >LOC_Os02g52550.1
ATGTATCCCTCCGCCCCTCCCGACGCGTATAACAAGTACAGCGCCGGTGCTCCACCGACGGCGCCGCCGCCGGCAACGTACCAGCTGCCGACGATGAACACCCCACGCACCGGCGGCGGGCTGACGCGATGGTCCACCGGCCTTTTCCACTGCATGGACGATCCCGGAAACTGTCTCATCACATGCGTGTGCCCCTGCATCACCTTTGGGCAGGTCGCTGACATCGTGGACAAGGGCACCTGCCCATGCCTCGCGAGCGGGACGGCTTACGCGCTCCTCTGCGCGTCGGGGATGGGGTGCCTGTACTCGTGCTTCTACCGGTCCAAGATGAGGGCTCAGTTCGACCTGGACGAAGGGGATTGCCCCGATTTCCTCGTCCATTTCTGCTGCGAGTACTGCGCGCTGTGCCAGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACTTGGGGATCGGTTGGGCTGCCAATGTGGACAGGCAGAGGCGAGGCGTCACCGGAGCGTCGGTGATGGGAGCTCCTGGCGTCCCGGTCGGCATGATGAGGTAG
Protein Sequence
- >LOC_Os02g52550.1
MYPSAPPDAYNKYSAGAPPTAPPPATYQLPTMNTPRTGGGLTRWSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYALLCASGMGCLYSCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVDRQRRGVTGASVMGAPGVPVGMMR*