Gene Details:
- MSU gene ID: LOC_Os02g52490
- RAPdb gene ID: Os02g0762600
- Gene Symbol: SGL1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- In comparison with the wild-type plants, the SGL1:OX plants showed a 45% decrease in plant height due to a uniform decrease of culm internode elongation.
- Lengths of seeds, panicles, and internodes in the rachis branches were 17%, 39%, and 31% shorter than those of the wild-type plants, respectively, and all differences were statistically significant.
- Down-Regulation of Both SG1 and SGL1 Caused Elongation of Rice Seeds and of the Internodes between Spikelets in the Rachis Branches.
Function-related keywords:
Literature:
- Short grain1 decreases organ elongation and brassinosteroid response in rice . DOI: 10.1104/pp.111.187567 ; PMID: 22209874
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os02g52490.1
ACCCTTGAGCCGTAACAGTGACCTGTTTCTGATTCAATTCAACAACGAGCCCGTTTCCTGCTCACACAACCACCTTTTAAACGCCTCATCACCTCCATCCTCGCAACTCGAAGCGAATTGAGCTCACAGTGGAGAAGGGAGAGCACGAGAGGGAGCAGAAGCGCGCGAGGAGAGGCCACGACCACCACCAGAGCGTCAAAATGGCATGCATCAACATGTACAACCCGGACGGCGGCGCGGCGTTCGGGGGCGGCCAGCCGCCGGCGCTGGGCCCGCGCATCTCCTTCTCCAGCGACTTTGTCGTCGAGCCACCGCCGCCGGTGCAGAACCGGGCGATGAACCTGCGGTGCCAGGAGGAGGATATCAACTTCGAGTTCTCGGTGGGTAGCCACCCCATGATGGCCGCCGACCAGCTCTTCTCCAAGGGCAGGATCCTTCCCCTCAAGGACGGCGGCTTCTCCTCCGGCCGGCCTCCCACCACGCTCCGCGACGAGCTTCGCTGCGACGACAGGGCGTCGGCCAAGGGATCCAGCCGGTGGAAGGAGATGCTCGGCCTGCGGAAGCCTCTCTGCGTCGGCGGCGTCAATGGCACCGCCAAGAAGAGCACCACCGTCGACACCGAGATGGTCACCGACGTGGCCGATTCCAAGCAGGAGCAATGAGATGACATATATGGGACTCAGCCAAAACACACATGGAACTCTCGTCTCTGTCTCATATTGTGACCATCCTCTTGCATTGTACTTGTCTCAAAGGCTAGTTTTTGTAGATGATTGTGCTCGGTTGCTTGTGTGCTAGATGGCCAGTGTGTGCTGAAGAGCAAACAATTGTGTTTTTTTTTTCTTGCATAAGTGCTGTCTCTCTAGCTAGCTGTCCACTAGATCCATATCAGTCTTTGCTTCCTCTTTCTTCTTTTTTTTTTTGTTTCTTTTTTCCCCCTCCACCCTGTACAAAATGCAGCGCTTGTGTAGATCGAAAATTTTATGGTGCAATCATTAGTCTGCCAGATGGCCAGATCTGTGAAGAGAGGATAGCCTATAGTGATGGAGCCTTTCTGGCCTGTGGGGATCAACAGTGCTCTCCTTTGTCTTGTTCCCTGCTCTGCTGTATGATTTCATAAAGAGGGACAAGATCCACAGAAGAGAGTGTGTATGATAGAGAACGAGAGGAAGAACAGAGGAAGGATCCACCTGAATCATGATCCTTTTTGTTTCTAGCAAATCGATACTTCACTCTCCCGACATGTCCGCTGCAGTGCTGCACTAGATGCACGGCTCTATGCAAAGCGTTTTCAAGGTTCTCAACATACATCAAATCATCTTGGTTTTAAATTAAACTGAAAGTAGGGCATTGATGCAAGCAATGGTGCTCAACTTTTCCATCTTTACAAGCCAATAGGACTGTTAACTATTGTTGAGTCACTTTAGTTAGCGGATTTTGTGGTCACTTTGTCCCTAATACAGGTCGTCATCTCGGTAAGGCGTCTAGCAATAGTGGATGTACTATATAGTACTCACAAGCTCCACAAGTTCTATTGAAACTGCTGAAACACAGAGCAGAGTTGTTTGAGGCTAGGAAGAAAACGATGCAAAATTCAATCCGTATCCTTTAGTGAATGCTGAGCATTGTTTCAAAGCATCAGGATAAAGCAACAAAAACATGCACAACTCCTCTGAAGAA - >LOC_Os02g52490.2
ACCCTTGAGCCGTAACAGTGACCTGTTTCTGATTCAATTCAACAACGAGCCCGTTTCCTGCTCACACAACCACCTTTTAAACGCCTCATCACCTCCATCCTCGCAACTCGAAGCGAATTGAGCTCACAGTGGAGAAGGGAGAGCACGAGAGGGAGCAGAAGCGCGCGAGGAGAGGCCACGACCACCACCAGAGCGTCAAAATGGCATGCATCAACATGTACAACCCGGACGGCGGCGCGGCGTTCGGGGGCGGCCAGCCGCCGGCGCTGGGCCCGCGCATCTCCTTCTCCAGCGACTTTGTCGTCGAGCCACCGCCGCCGGTGCAGAACCGGGCGATGAACCTGCGGTGCCAGGAGGAGGATATCAACTTCGAGTTCTCGGTGGGTAGCCACCCCATGATGGCCGCCGACCAGCTCTTCTCCAAGGGCAGGATCCTTCCCCTCAAGGACGGCGGCTTCTCCTCCGGCCGGCCTCCCACCACGCTCCGCGACGAGCTTCGCTGCGACGACAGGGCGTCGGCCAAGGGATCCAGCCGGTGGAAGGAGATGCTCGGCCTGCGGAAGCCTCTCTGCGTCGGCGGCGTCAATGGCACCGCCAAGAAGAGCACCACCGTCGACACCGAGATGGTCACCGACGTGGCCGATTCCAAGCAGGAGCAATGAGATGACATATATGGGACTCAGCCAAAACACACATGGAACTCTCGTCTCTGTCTCATATTGTGACCATCCTCTTGCATTGTACTTGTCTCAAAGGCTAGTTTTTGTAGATGATTGTGCTCGGTTGCTTGTGTGCTAGATGGCCAGTGTGTGCTGAAGAGCAAACAATTGTGTTTTTTTTTTCTTGCATAAGTGCTGTCTCTCTAGCTAGCTGTCCACTAGATCCATATCAGTCTTTGCTTCCTCTTTCTTCTTTTTTTTTTTGTTTCTTTTTTCCCCCTCCACCCTGTACAAAATGCAGCGCTTGTGTAGATCGAAAATTTTATGGTGCAATCATTAGTCTGCCAGATGGCCAGATCTGTGAAGAGAGGATAGCCTATAGTGATGGAGCCTTTCTGGCCTGTGGGGATCAACAGTGCTCTCCTTTGTCTTGTTCCCTGCTCTGCTGTATGATTTCATAAAGAGGGACAAGATCCACAGAAGAGAGTGTGTATGATAGAGAACGAGAGGAAGAACAGAGGAAGGATCCACCTGAATCATGATCCTTTTTGTTTCTAGCAAATCGATACTTCACTCTCCCGACATGTCCGCTGCAGTGCTGCACTAGATGCACGGCTCTATGCAAAGCGTTTTCAAGGTTCTCAACATACATCAAATCATCTTGGTTTTAAATTAAACTGAAAGTAGGGCATTGATGCAAGCAATGGTGCTCAACTTTTCCATCTTTACAAGCCAATAGGACTGTTAACTATTGTTGAGTCACTTTAGTTAGCGGATTTTGTGGTCACTTTGTCCCTAATACAGGTCGTCATCTCGGTAAGGCGTCTAGCAATAGTGGATGTACTATATAGTACTCACAAGCTCCACAAGTTCTATTGAAACTGCTGAAACACAGAGCAGAGTTGTTTGAGGCTAGGAAGAAAACGATGCAAAATTCAATCCGTATCCTTTAGTGAATGCTGAGCATTGTTTCAAAGCATCAGGATAAAGCAACAAAAACATGCACAACTCCTCTGAAGAA
CDS Sequence
- >LOC_Os02g52490.1
ATGGCATGCATCAACATGTACAACCCGGACGGCGGCGCGGCGTTCGGGGGCGGCCAGCCGCCGGCGCTGGGCCCGCGCATCTCCTTCTCCAGCGACTTTGTCGTCGAGCCACCGCCGCCGGTGCAGAACCGGGCGATGAACCTGCGGTGCCAGGAGGAGGATATCAACTTCGAGTTCTCGGTGGGTAGCCACCCCATGATGGCCGCCGACCAGCTCTTCTCCAAGGGCAGGATCCTTCCCCTCAAGGACGGCGGCTTCTCCTCCGGCCGGCCTCCCACCACGCTCCGCGACGAGCTTCGCTGCGACGACAGGGCGTCGGCCAAGGGATCCAGCCGGTGGAAGGAGATGCTCGGCCTGCGGAAGCCTCTCTGCGTCGGCGGCGTCAATGGCACCGCCAAGAAGAGCACCACCGTCGACACCGAGATGGTCACCGACGTGGCCGATTCCAAGCAGGAGCAATGA - >LOC_Os02g52490.2
ATGGCATGCATCAACATGTACAACCCGGACGGCGGCGCGGCGTTCGGGGGCGGCCAGCCGCCGGCGCTGGGCCCGCGCATCTCCTTCTCCAGCGACTTTGTCGTCGAGCCACCGCCGCCGGTGCAGAACCGGGCGATGAACCTGCGGTGCCAGGAGGAGGATATCAACTTCGAGTTCTCGGTGGGTAGCCACCCCATGATGGCCGCCGACCAGCTCTTCTCCAAGGGCAGGATCCTTCCCCTCAAGGACGGCGGCTTCTCCTCCGGCCGGCCTCCCACCACGCTCCGCGACGAGCTTCGCTGCGACGACAGGGCGTCGGCCAAGGGATCCAGCCGGTGGAAGGAGATGCTCGGCCTGCGGAAGCCTCTCTGCGTCGGCGGCGTCAATGGCACCGCCAAGAAGAGCACCACCGTCGACACCGAGATGGTCACCGACGTGGCCGATTCCAAGCAGGAGCAATGA
Protein Sequence
- >LOC_Os02g52490.1
MACINMYNPDGGAAFGGGQPPALGPRISFSSDFVVEPPPPVQNRAMNLRCQEEDINFEFSVGSHPMMAADQLFSKGRILPLKDGGFSSGRPPTTLRDELRCDDRASAKGSSRWKEMLGLRKPLCVGGVNGTAKKSTTVDTEMVTDVADSKQEQ* - >LOC_Os02g52490.2
MACINMYNPDGGAAFGGGQPPALGPRISFSSDFVVEPPPPVQNRAMNLRCQEEDINFEFSVGSHPMMAADQLFSKGRILPLKDGGFSSGRPPTTLRDELRCDDRASAKGSSRWKEMLGLRKPLCVGGVNGTAKKSTTVDTEMVTDVADSKQEQ*