Information report for OsRING-1;OsATL38
Gene Details
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Functional Descriptions
- A novel blast-inducible RING-H2 type zinc finger protein gene OsRING-1 was cloned from rice by cDNA library screening.
- Tissue expression analysis showed that OsRING-1 was constitutively strongly expressed in roots, but faintly in stems, leaves and sheaths.
- The promoter sequence analysis of OsRING-1 gene revealed that some ABA, GA, ethylene, wound, drought, heat stress and pathogen infection responsive elements were found within the OsRING-1 promoter region.
- Taken together, OsRING-1, as a novel C3H2C3-type zinc finger protein involved in many stress responses in rice might plays a role as a transcription regulator in plant stress response signal transduction pathways.
- Northern analysis showed that OsRING-1 was induced in different degree by pathogen infections, SA, ABA, JA and ethephon (ET) treatments.
- In contrast, RNAi-mediated OsATL38 knockdown transgenic progeny exhibited markedly increased tolerance to cold stress relative to that of wild-type plants, which indicated a negative role of OsATL38 in response to cold stress.
- OsATL38 mediates mono-ubiquitination of the 14-3-3 protein OsGF14d and negatively regulates the cold stress response in rice.
- These results suggested that the RING E3 Ub ligase OsATL38 negatively regulates the cold stress response in rice via mono-ubiquitination of OsGF14d 14-3-3 protein.
- In this study, OsATL38 was identified as a low temperature-induced gene that encodes a rice homolog of Arabidopsis T
xicos en Levadura RING-type E3 ubiquitin (Ub) ligase, which was predominantly localized to the plasma membrane.
Functional Keywords
- blast , root , sheath , stem , ethylene , drought , transcription-regulator , ja , tolerance , cold-stress , stress , cold , plasma-membrane , Ubiquitin , stress-response
Literature and News
- Molecular cloning and characterization of a rice blast-inducible RING-H2 type zinc finger gene . DOI: 10.1080/10425170500476509 ; PMID: 16753816
- OsATL38 mediates mono-ubiquitination of the 14-3-3 protein OsGF14d and negatively regulates the cold stress response in rice . DOI: 10.1093/jxb/erab392 ; PMID: 34436579
Gene Resources
- NCBI ID: AY579411
Sequences
cDNA Sequence
- >LOC_Os02g52210.1
AGGGAAGACGACTAGCCAAGGCGCCCTCGCCTCCCGCCGCCGACCACGCGCGCTATCTGCATGCCAAGTTGCCGAGCTAGGATGCACGCGCACCAGCACCAGCACGCGCTGCTCGCGGCGCTCCTCGCGTGCGCGCTCGCGGCGTCGTCGTCGACGGCCGGAGCGCAGCCGGCGGGGCAGCAGGGGTATGCCTACGGCGACGTGTCCGGGCAGCAGGTGCACGTCAGCACGACGATGATCGTGCTGCTGGCCGCCGTCGTCGGGGTTTTCCTGTTCATCGCGATCTCCACCATCTACCTCCGCCACTGCACCGGTTACGACCCCGCGACGGAGGGCGGCGGCGTCGGCGGGAGCCGTTCCATGATCCTCCCTGCCAACAGCTTCGTCTCGAGGCGGCAGCGGCGGCCGCGCGGGCTCGACTCGTCGGTGGTCCGGATGTTCCCCACCATGAAGTACGCCGAGGCGAAGGCGCTGCGGGTGGGGAAGGTCGCCGGCGCCGCGCTGGAGTGCGCGGTGTGCCTCAGCGAGTTCGAGGACGACGAGATGCTCAGGTTCCTGCCCAAGTGCAGCCACGCCTTCCACCCGGACTGCATCGGCCAGTGGCTCGCCAGCCACGTGACCTGCCCCGTCTGCCGCCGCAATCTCGACCCTAACAAGGACACCACCGAAGAGGTGATCATCCCGGCCGCCGCCGCCGCCGATCCGAACAGCACCTCCAGTGAAATAGTTGTGATACGGCAAGAAGACGGGGCGCACCCAGCAGCCGTGGTGATCGACGTGGTCACCGAGGAGGACGACGAGGAGCGGAGGAAGGAGGAGCTAGAGCTTCAGGCGATAGGCACCCAGCTCCGCGCGATGCGGTCACGGTCGGGGCTGCGGCCAAAGACGTCGGCGGCGAAGCTTCCCCGGTCGCACTCCACTGGCCACTCCCTCGCCGTCCGGCTCGACGGCGACCTAGAGCGGTACACGCTGCGGCTGCCGGAGCACGTACACAGGGAGATGGTCGCGGCGGGGGAGCAGAGCGTGCGCCGCGGGAGGAGACTCGGGGAAGGGGTCGGCATGGGCGCTCGGTGCAGCCCCCGGTTTTCGCGGTCGGGCAGATGGTCATCTTTTCTCTCAAATTCTTTGTCAGGAAAGCTGTCTTTCCTCTCCCCGTCGTCGAGGAGAACGCCGGATAGCACCCAGGTGGAAGTGTCATCATCCTCGTCGTCGTCGGTGACGAAGGTGAAAGGGAAGCGCGTGGCCGCCGTCGATGTTGCCGACGACGGTTCTGCTCATGGGACTGCACAGTACCCTGGTTGCACTGTGGCCAGCTCGGCGGCGGCGGCGGCTGTGGACGTGGAGAAGGCAGCTACCAGGAGACGAATGCATAAATGAAATGTTAGGCATTAACACCCGCCGTTTCGGCCGGGCGCAGGCTCTGTCAATATGACTGGTAAACCATCTCCATCGACTGGACGCCGAGGGTAAGAATTTAACTTTACAATTCATATCGATGATCGATCAATATGTAAGATTTGCCAATACATCTGAATAAACTGAAGCCTATTACTACATA - >LOC_Os02g52210.2
AGGGAAGACGACTAGCCAAGGCGCCCTCGCCTCCCGCCGCCGACCACGCGCGCTATCTGCATGCCAAGTTGCCGAGCTAGGATGCACGCGCACCAGCACCAGCACGCGCTGCTCGCGGCGCTCCTCGCGTGCGCGCTCGCGGCGTCGTCGTCGACGGCCGGAGCGCAGCCGGCGGGGCAGCAGGGGTATGCCTACGGCGACGTGTCCGGGCAGCAGGTGCACGTCAGCACGACGATGATCGTGCTGCTGGCCGCCGTCGTCGGGGTTTTCCTGTTCATCGCGATCTCCACCATCTACCTCCGCCACTGCACCGGTTACGACCCCGCGACGGAGGGCGGCGGCGTCGGCGGGAGCCGTTCCATGATCCTCCCTGCCAACAGCTTCGTCTCGAGGCGGCAGCGGCGGCCGCGCGGGCTCGACTCGTCGGTGGTCCGGATGTTCCCCACCATGAAGTACGCCGAGGCGAAGGCGCTGCGGGTGGGGAAGGTCGCCGGCGCCGCGCTGGAGTGCGCGGTGTGCCTCAGCGAGTTCGAGGACGACGAGATGCTCAGGTTCCTGCCCAAGTGCAGCCACGCCTTCCACCCGGACTGCATCGGCCAGTGGCTCGCCAGCCACGTGACCTGCCCCGTCTGCCGCCGCAATCTCGACCCTAACAAGGACACCACCGAAGAGGTGATCATCCCGGCCGCCGCCGCCGCCGATCCGAACAGCACCTCCAGTGAAATAGTTGTGATACGGCAAGAAGACGGGGCGCACCCAGCAGCCGTGGTGATCGACGTGGTCACCGAGGAGGACGACGAGGAGCGGAGGAAGGAGGAGCTAGAGCTTCAGGCGATAGGCACCCAGCTCCGCGCGATGCGGTCACGGTCGGGGCTGCGGCCAAAGACGTCGGCGGCGAAGCTTCCCCGGTCGCACTCCACTGGCCACTCCCTCGCCGTCCGGCTCGACGGCGACCTAGAGCGGTACACGCTGCGGCTGCCGGAGCACGTACACAGGGAGATGGTCGCGGCGGGGGAGCAGAGCGTGCGCCGCGGGAGGAGACTCGGGGAAGGGGTCGGCATGGGCGCTCGGTGCAGCCCCCGGTTTTCGCGGTCGGGCAGATGGTCATCTTTTCTCTCAAATTCTTTGTCAGGAAAGCTGTCTTTCCTCTCCCCGTCGTCGAGGAGAACGCCGGATAGCACCCAGGTGGAAGTGTCATCATCCTCGTCGTCGTCGGTGACGAAGGTGAAAGGGAAGCGCGTGGCCGCCGTCGATGTTGCCGACGACGGTTCTGCTCATGGGACTGCACAGTACCCTGGTTGCACTGTGGCCAGCTCGGCGGCGGCGGCGGCTGTGGACGTGGAGAAGGCAGCTACCAGGAGACGAATGCATAAATGAAATGTTAGGCATTAACACCCGCCGTTTCGGCCGGGCGCAGGCTCTGTCAATATGACTGGTAAACCATCTCCATCGACTGGACGCCGAGGGTAAGAATTTAACTTTACAATTCATATCGATGATCGATCAATATGTAAGATTTGCCAATACATCTGAATAAACTGAAGCCTATTACTACATA
CDS Sequence
- >LOC_Os02g52210.1
ATGCCAAGTTGCCGAGCTAGGATGCACGCGCACCAGCACCAGCACGCGCTGCTCGCGGCGCTCCTCGCGTGCGCGCTCGCGGCGTCGTCGTCGACGGCCGGAGCGCAGCCGGCGGGGCAGCAGGGGTATGCCTACGGCGACGTGTCCGGGCAGCAGGTGCACGTCAGCACGACGATGATCGTGCTGCTGGCCGCCGTCGTCGGGGTTTTCCTGTTCATCGCGATCTCCACCATCTACCTCCGCCACTGCACCGGTTACGACCCCGCGACGGAGGGCGGCGGCGTCGGCGGGAGCCGTTCCATGATCCTCCCTGCCAACAGCTTCGTCTCGAGGCGGCAGCGGCGGCCGCGCGGGCTCGACTCGTCGGTGGTCCGGATGTTCCCCACCATGAAGTACGCCGAGGCGAAGGCGCTGCGGGTGGGGAAGGTCGCCGGCGCCGCGCTGGAGTGCGCGGTGTGCCTCAGCGAGTTCGAGGACGACGAGATGCTCAGGTTCCTGCCCAAGTGCAGCCACGCCTTCCACCCGGACTGCATCGGCCAGTGGCTCGCCAGCCACGTGACCTGCCCCGTCTGCCGCCGCAATCTCGACCCTAACAAGGACACCACCGAAGAGGTGATCATCCCGGCCGCCGCCGCCGCCGATCCGAACAGCACCTCCAGTGAAATAGTTGTGATACGGCAAGAAGACGGGGCGCACCCAGCAGCCGTGGTGATCGACGTGGTCACCGAGGAGGACGACGAGGAGCGGAGGAAGGAGGAGCTAGAGCTTCAGGCGATAGGCACCCAGCTCCGCGCGATGCGGTCACGGTCGGGGCTGCGGCCAAAGACGTCGGCGGCGAAGCTTCCCCGGTCGCACTCCACTGGCCACTCCCTCGCCGTCCGGCTCGACGGCGACCTAGAGCGGTACACGCTGCGGCTGCCGGAGCACGTACACAGGGAGATGGTCGCGGCGGGGGAGCAGAGCGTGCGCCGCGGGAGGAGACTCGGGGAAGGGGTCGGCATGGGCGCTCGGTGCAGCCCCCGGTTTTCGCGGTCGGGCAGATGGTCATCTTTTCTCTCAAATTCTTTGTCAGGAAAGCTGTCTTTCCTCTCCCCGTCGTCGAGGAGAACGCCGGATAGCACCCAGGTGGAAGTGTCATCATCCTCGTCGTCGTCGGTGACGAAGGTGAAAGGGAAGCGCGTGGCCGCCGTCGATGTTGCCGACGACGGTTCTGCTCATGGGACTGCACAGTACCCTGGTTGCACTGTGGCCAGCTCGGCGGCGGCGGCGGCTGTGGACGTGGAGAAGGCAGCTACCAGGAGACGAATGCATAAATGA - >LOC_Os02g52210.2
ATGCCAAGTTGCCGAGCTAGGATGCACGCGCACCAGCACCAGCACGCGCTGCTCGCGGCGCTCCTCGCGTGCGCGCTCGCGGCGTCGTCGTCGACGGCCGGAGCGCAGCCGGCGGGGCAGCAGGGGTATGCCTACGGCGACGTGTCCGGGCAGCAGGTGCACGTCAGCACGACGATGATCGTGCTGCTGGCCGCCGTCGTCGGGGTTTTCCTGTTCATCGCGATCTCCACCATCTACCTCCGCCACTGCACCGGTTACGACCCCGCGACGGAGGGCGGCGGCGTCGGCGGGAGCCGTTCCATGATCCTCCCTGCCAACAGCTTCGTCTCGAGGCGGCAGCGGCGGCCGCGCGGGCTCGACTCGTCGGTGGTCCGGATGTTCCCCACCATGAAGTACGCCGAGGCGAAGGCGCTGCGGGTGGGGAAGGTCGCCGGCGCCGCGCTGGAGTGCGCGGTGTGCCTCAGCGAGTTCGAGGACGACGAGATGCTCAGGTTCCTGCCCAAGTGCAGCCACGCCTTCCACCCGGACTGCATCGGCCAGTGGCTCGCCAGCCACGTGACCTGCCCCGTCTGCCGCCGCAATCTCGACCCTAACAAGGACACCACCGAAGAGGTGATCATCCCGGCCGCCGCCGCCGCCGATCCGAACAGCACCTCCAGTGAAATAGTTGTGATACGGCAAGAAGACGGGGCGCACCCAGCAGCCGTGGTGATCGACGTGGTCACCGAGGAGGACGACGAGGAGCGGAGGAAGGAGGAGCTAGAGCTTCAGGCGATAGGCACCCAGCTCCGCGCGATGCGGTCACGGTCGGGGCTGCGGCCAAAGACGTCGGCGGCGAAGCTTCCCCGGTCGCACTCCACTGGCCACTCCCTCGCCGTCCGGCTCGACGGCGACCTAGAGCGGTACACGCTGCGGCTGCCGGAGCACGTACACAGGGAGATGGTCGCGGCGGGGGAGCAGAGCGTGCGCCGCGGGAGGAGACTCGGGGAAGGGGTCGGCATGGGCGCTCGGTGCAGCCCCCGGTTTTCGCGGTCGGGCAGATGGTCATCTTTTCTCTCAAATTCTTTGTCAGGAAAGCTGTCTTTCCTCTCCCCGTCGTCGAGGAGAACGCCGGATAGCACCCAGGTGGAAGTGTCATCATCCTCGTCGTCGTCGGTGACGAAGGTGAAAGGGAAGCGCGTGGCCGCCGTCGATGTTGCCGACGACGGTTCTGCTCATGGGACTGCACAGTACCCTGGTTGCACTGTGGCCAGCTCGGCGGCGGCGGCGGCTGTGGACGTGGAGAAGGCAGCTACCAGGAGACGAATGCATAAATGA
Protein Sequence
- >LOC_Os02g52210.1
MPSCRARMHAHQHQHALLAALLACALAASSSTAGAQPAGQQGYAYGDVSGQQVHVSTTMIVLLAAVVGVFLFIAISTIYLRHCTGYDPATEGGGVGGSRSMILPANSFVSRRQRRPRGLDSSVVRMFPTMKYAEAKALRVGKVAGAALECAVCLSEFEDDEMLRFLPKCSHAFHPDCIGQWLASHVTCPVCRRNLDPNKDTTEEVIIPAAAAADPNSTSSEIVVIRQEDGAHPAAVVIDVVTEEDDEERRKEELELQAIGTQLRAMRSRSGLRPKTSAAKLPRSHSTGHSLAVRLDGDLERYTLRLPEHVHREMVAAGEQSVRRGRRLGEGVGMGARCSPRFSRSGRWSSFLSNSLSGKLSFLSPSSRRTPDSTQVEVSSSSSSSVTKVKGKRVAAVDVADDGSAHGTAQYPGCTVASSAAAAAVDVEKAATRRRMHK* - >LOC_Os02g52210.2
MPSCRARMHAHQHQHALLAALLACALAASSSTAGAQPAGQQGYAYGDVSGQQVHVSTTMIVLLAAVVGVFLFIAISTIYLRHCTGYDPATEGGGVGGSRSMILPANSFVSRRQRRPRGLDSSVVRMFPTMKYAEAKALRVGKVAGAALECAVCLSEFEDDEMLRFLPKCSHAFHPDCIGQWLASHVTCPVCRRNLDPNKDTTEEVIIPAAAAADPNSTSSEIVVIRQEDGAHPAAVVIDVVTEEDDEERRKEELELQAIGTQLRAMRSRSGLRPKTSAAKLPRSHSTGHSLAVRLDGDLERYTLRLPEHVHREMVAAGEQSVRRGRRLGEGVGMGARCSPRFSRSGRWSSFLSNSLSGKLSFLSPSSRRTPDSTQVEVSSSSSSSVTKVKGKRVAAVDVADDGSAHGTAQYPGCTVASSAAAAAVDVEKAATRRRMHK*