Information report for LYL1;OsChlP
Gene Details
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Functional Descriptions
- In this study, we characterized a rice light-induced yellow leaf 1-1 (LYL1-1) mutant that is hypersensitive to high-light and defective in the Chl synthesis.
- Additionally, the LYL1-1 mutant suffered from severe photooxidative damage and displayed a drastic reduction in the levels of alpha-tocopherol and photosynthetic proteins.
Literature and News
- Mutation of the light-induced yellow leaf 1 gene, which encodes a geranylgeranyl reductase, affects chlorophyll biosynthesis and light sensitivity in rice . DOI: 10.1371/journal.pone.0075299 ; PMID: 24058671
- A recruiting protein of geranylgeranyl diphosphate synthase controls metabolic flux toward chlorophyll biosynthesis in rice . DOI: 10.1073/pnas.1705689114 ; PMID: 28607067
Gene Resources
- UniProt: U5LY03
- EMBL: KF305678
- AlphaFoldDB: U5LY03
- EnsemblPlants: Os02t0744900-01
- Gramene: Os02t0744900-01
- Orthologous matrix: MVNPFNG
- InterPro: IPR002938, IPR010253, IPR011774
- PANTHER: PTHR42685, PTHR42685:SF4
- SUPFAM: SSF51905
- Gene3D: 3.50.50.60
- OrthoDB: U5LY03
- SWISS-MODEL: U5LY03
Sequences
cDNA Sequence
- >LOC_Os02g51080.1
GCGCTCACTCCTCCACCGCCAGGTCGAGCTCAAACGAGAGAGATCTTTTCCGAATCCGAGGAGGAGAAGCCACAGAAACGATGACCTCGCTGTCGTCCTCCGCCGCCGCGGCGCGCGCCACCTTCGTCATGCCGTCGTCGGTTCGTGGGGGCATGAGCCGCGGCAGGAGGATGGCGAGGCTGGTGACGCGCGCGGCGGCGTCGAGCCCGAAGCTCCCGAGCGGGCGGCGGCTGCGGGTGGCGGTGGTCGGAGGCGGACCCGCGGGCGGCGCGGCGGCGGAGGCGCTGGCCAAGGGCGGCGTGGAGACGGTGCTCATCGAACGGAAGCTGGACAACTGCAAGCCCTGCGGCGGGGCCATCCCGCTGTGCATGGTGTCGGAGTTCGACCTGCCGCTGGACCTCGTCGACAGGAAGGTGAGGAAGATGAAGATGATTTCGCCGTCCAACGTCGCCGTCGACATCGGCGGCACGCTCGCGCCGCACGAGTACATCGGCATGGTCCGCCGCGAGGTGCTCGACGCCTACCTCCGCTCCCGCGCCGAGGGGGCCGGCGCCGAGGTCGTCAATGGTCTCTTCCTGAGGTATGAGGCGCCCAAGGAACCCAACGGGTCGTACGTGGTGCACTACAACCACTACGACAGCTCCAACGGCAAGGCCGGCGGCGAGAAGCGGACGTTCGAGGTGGACGCGATCGTGGGCGCGGACGGCGCCAACTCCCGCGTCGCCAAGGACATGGGCGCCGGCGACTACGAGTACGCCATCGCGTTCCAGGAGCGCGTCAAGATCCCCGACGACAAGATGAAGTACTACGAGGAGCGCGCCGAGATGTACGTCGGCGACGACGTCTCGCCGGACTTCTACGGCTGGGTGTTCCCCAAGTGCGACCACGTCGCCGTCGGCACCGGCACCGTCACCCACAAGCCCGACATCAAGAAGTTCCAGGCCGCCACCCGCCTTCGCGCCAAGGACCGGATCGAGGGCGGCAAGATCATCCGCGTCGAGGCTCACCCCATCCCCGAGCACCCGAGGCCTAAGAGGGTGGCGGGGAGGGTGACGCTGGTGGGGGACGCGGCGGGGTACGTGACAAAGTGCTCCGGCGAGGGGATCTACTTCGCGGCGAAGAGCGGGCGGATGTGCGCGGAGGCGATCGTGGCCGGGTCGGCGAACGGGACGCGGATGGTGGAGGAGAGCGACCTGCGCAGGTACCTGGCCGAGTTCGACCGCCTCTACTGGCCGACGTACAAGGTGCTCGACGTGCTCCAGAAGGTGTTCTACCGCTCCAACGCCGCCCGCGAGGCGTTCGTCGAGATGTGCGCCGACGACTACGTCCAGAGGATGACCTTCGACAGCTACCTCTACAAGCGCGTCGTGCCGGGCAACCCGCTCGACGACATCAAGCTCGCCGTCAACACCATCGGCAGCCTCGTCCGCGCCACCGCCCTCCGCCGCGAGATGGAGAAGGTCACCTTGTGAGCCTGAGCTGCCATGACCACGACCGCGATCGAACACTTTGCTTCATTTTCTTGAGGCATTAGAAACTGCAATTTGCGGTGGATCAGTGTGCATGTATAGTACAGATTCGCGGCTGATCAAACAGATTTGAACAAGCGTAAGTAGAGATGGATAAGAGAGAGAGGCTGTGTACCGATCGACCCTGTCCGATTTTCTTGTACAACACAAGGTGATGTTCAGACTTGGGGGCAGTTTGGTTGGATTACTGAAGCACACCAATCTTCGGTGTGAACTCAATGTACTACTATATAAGCTCCATGTTTCTGCATGGTTCATGTTTCCTGACGAATGGTGAATGACATGAAATGGTTTACTTTAGCTGTTCTTCATGCAA
CDS Sequence
- >LOC_Os02g51080.1
ATGACCTCGCTGTCGTCCTCCGCCGCCGCGGCGCGCGCCACCTTCGTCATGCCGTCGTCGGTTCGTGGGGGCATGAGCCGCGGCAGGAGGATGGCGAGGCTGGTGACGCGCGCGGCGGCGTCGAGCCCGAAGCTCCCGAGCGGGCGGCGGCTGCGGGTGGCGGTGGTCGGAGGCGGACCCGCGGGCGGCGCGGCGGCGGAGGCGCTGGCCAAGGGCGGCGTGGAGACGGTGCTCATCGAACGGAAGCTGGACAACTGCAAGCCCTGCGGCGGGGCCATCCCGCTGTGCATGGTGTCGGAGTTCGACCTGCCGCTGGACCTCGTCGACAGGAAGGTGAGGAAGATGAAGATGATTTCGCCGTCCAACGTCGCCGTCGACATCGGCGGCACGCTCGCGCCGCACGAGTACATCGGCATGGTCCGCCGCGAGGTGCTCGACGCCTACCTCCGCTCCCGCGCCGAGGGGGCCGGCGCCGAGGTCGTCAATGGTCTCTTCCTGAGGTATGAGGCGCCCAAGGAACCCAACGGGTCGTACGTGGTGCACTACAACCACTACGACAGCTCCAACGGCAAGGCCGGCGGCGAGAAGCGGACGTTCGAGGTGGACGCGATCGTGGGCGCGGACGGCGCCAACTCCCGCGTCGCCAAGGACATGGGCGCCGGCGACTACGAGTACGCCATCGCGTTCCAGGAGCGCGTCAAGATCCCCGACGACAAGATGAAGTACTACGAGGAGCGCGCCGAGATGTACGTCGGCGACGACGTCTCGCCGGACTTCTACGGCTGGGTGTTCCCCAAGTGCGACCACGTCGCCGTCGGCACCGGCACCGTCACCCACAAGCCCGACATCAAGAAGTTCCAGGCCGCCACCCGCCTTCGCGCCAAGGACCGGATCGAGGGCGGCAAGATCATCCGCGTCGAGGCTCACCCCATCCCCGAGCACCCGAGGCCTAAGAGGGTGGCGGGGAGGGTGACGCTGGTGGGGGACGCGGCGGGGTACGTGACAAAGTGCTCCGGCGAGGGGATCTACTTCGCGGCGAAGAGCGGGCGGATGTGCGCGGAGGCGATCGTGGCCGGGTCGGCGAACGGGACGCGGATGGTGGAGGAGAGCGACCTGCGCAGGTACCTGGCCGAGTTCGACCGCCTCTACTGGCCGACGTACAAGGTGCTCGACGTGCTCCAGAAGGTGTTCTACCGCTCCAACGCCGCCCGCGAGGCGTTCGTCGAGATGTGCGCCGACGACTACGTCCAGAGGATGACCTTCGACAGCTACCTCTACAAGCGCGTCGTGCCGGGCAACCCGCTCGACGACATCAAGCTCGCCGTCAACACCATCGGCAGCCTCGTCCGCGCCACCGCCCTCCGCCGCGAGATGGAGAAGGTCACCTTGTGA
Protein Sequence
- >LOC_Os02g51080.1
MTSLSSSAAAARATFVMPSSVRGGMSRGRRMARLVTRAAASSPKLPSGRRLRVAVVGGGPAGGAAAEALAKGGVETVLIERKLDNCKPCGGAIPLCMVSEFDLPLDLVDRKVRKMKMISPSNVAVDIGGTLAPHEYIGMVRREVLDAYLRSRAEGAGAEVVNGLFLRYEAPKEPNGSYVVHYNHYDSSNGKAGGEKRTFEVDAIVGADGANSRVAKDMGAGDYEYAIAFQERVKIPDDKMKYYEERAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKPDIKKFQAATRLRAKDRIEGGKIIRVEAHPIPEHPRPKRVAGRVTLVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSANGTRMVEESDLRRYLAEFDRLYWPTYKVLDVLQKVFYRSNAAREAFVEMCADDYVQRMTFDSYLYKRVVPGNPLDDIKLAVNTIGSLVRATALRREMEKVTL*