Information report for SSIIB
Gene Details
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Functional Descriptions
Literature and News
- Knockout of a starch synthase gene OsSSIIIa/Flo5 causes white-core floury endosperm in rice (Oryza sativa L.) . DOI: 10.1007/s00299-007-0309-8 ; PMID: 17297616
- Posttranscriptional control of photosynthetic mRNA decay under stress conditions requires 3’ and 5’ untranslated regions and correlates with differential polysome association in rice . DOI: 10.1104/pp.112.194928 ; PMID: 22566494
- Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities . DOI: 10.1073/pnas.0912396106 ; PMID: 20018713
- Genetic analysis of starch paste viscosity parameters in glutinous rice (Oryza sativa L.) . DOI: 10.1007/s00122-010-1423-5 ; PMID: 20737264
Gene Resources
- UniProt: D0TZP8
- EMBL: GQ150969, GQ150970, GQ150971
- AlphaFoldDB: D0TZP8
- EnsemblPlants: Os02t0744700-03
- Gramene: Os02t0744700-03
- InterPro: IPR011835, IPR013534
- PANTHER: PTHR45825, PTHR45825:SF13
- SUPFAM: SSF53756
- Gene3D: 3.40.50.2000
- OrthoDB: D0TZP8
- SWISS-MODEL: D0TZP8
- Conserved Domain Database: cd03791
Homologs
Sequences
cDNA Sequence
- >LOC_Os02g51070.1
AATCTCTTTTCTCTCGTCGTCGTCTCGTCTTCCCACCTCTCGGATTCCCGAGCTCCACACGACACGACCCACCTCGGCCACTCTCCGCCGTCGGTGGCCAGTGGCCTCCACCCCCTCCGTCCCCCGGGGACCACACCGGCGTAACATCAGCCACACCTCCGGCAGATCTTTCCCCCGCCGCTTAATTCACCTCGTGCGCGCGCGGCGCCGCTCGTTGCCTAGCTAGCTAGCTCGGCCGCAATCTAGTAGTAGTAGTAGGAGGAGGAGGAGCGGCGGCGGCGGCGGATCCTATGTCGGGGGCAATCGCTTCCTCGCCGGCGGCTACTCTCTTCCTCGCTGGCTCCTCCTCCTCTTCGCCGCGGCGCAGGCGGAGCAGGGTGAGCGGGGTTTGGTGGCACTTGTATGGTGGCACGGGGCTGCGGTTGCATTGGGAGCGGCGGGGTTTGGTTCGGGACGGAGCCGTCGTGTGCTCGGCGTCGGCCGCCGGTGGTGAGGATGGCGTCGCGAAGGCGAAGACGAAGTCAGCGGGGAGCTCGAAGGCGGTCGCTGTGCAGGGCAGCACGGCCAAGGCTGATCATGTTGAGGATTCAGTTTCATCACCCAAATACGTGAAACCTGCCGTTGCGAAGCAAAATGGAGAGGTTGTGAGCAGAGCTACCAAATCTGATGCACCAGTGTCTAAACCCAAAGTTGACCCGTCAGTTCCTGCTTCCAAGGCTGAAGCTGATGGTAATGCACAAGCTGTGGAATCGAAGGCTGCACTGGACAAGAAGGAAGACGTCGGTGTTGCTGAACCGTTGGAAGCTAAGGCTGATGCTGGTGGAGATGCAGGTGCAGTAAGCTCTGCAGATGATAGTGAGAACAAGGAATCTGGTCCATTGGCAGGGCCAAATGTGATGAATGTCATTGTGGTGGCTTCTGAATGTTCTCCTTTCTGTAAAACAGGTGGTCTTGGAGATGTTGTGGGTGCTTTGCCTAAGGCTCTGGCAAGAAGAGGACATCGTGTTATGGTTGTGATACCAAGATACGGAGAATATGCAGAAGCCAAGGATCTAGGTGTCCGCAAACGTTACAGGGTAGCTGGACAGGATTCAGAAGTGAGTTATTTTCATGCTTTTATCGATGGTGTTGATTTTGTGTTTCTAGAGGCCCCTCCCTTTCGACACCGGCACAATGATATTTATGGAGGAGAAAGATTTGATGTTTTGAAGCGTATGATTTTGTTCTGCAAAGCTGCTGTTGAGGTTCCTTGGTTTGCTCCATGTGGTGGTTCCATCTACGGTGATGGCAATTTAGTCTTCATTGCAAATGATTGGCATACTGCACTTTTACCCGTATATTTGAAGGCATATTACCGAGATAATGGCTTGATGCAGTATACTCGCTCTGTTCTTGTGATACACAACATTGCTCATCAGGGTCGTGGCCCTGTAGATGACTTCGCCACGATGGACTTGCCCGAGCACTACATCGATCATTTCAGACTGTACGACCCCGTCGGCGGTGAGCACAGCAACGTGTTCGCCGCTGGCCTGAAGATGGCTGACCGCGCGGTCACCGTCAGCCATGGCTATCTGTGGGAGATCAAGACAATGGACGGTGGCTGGGGCCTCCACGAGATAATAAACCACAACGACTGGAAGCTGCAGGGCATCGTGAACGGCATCGACATGGCCGAATGGAACCCCGAGGTGGACGAGCACCTGCAGTCCGACGGCTACGCCAACTACACGTTCGAGACGCTGGACACCGGCAAGAAACAGTGCAAGGAGGCGCTGCAGCGGCAGCTGGGCCTGCAGGTCCGCGACGACGTGCCGCTGATCGGGTTCATCGGGCGGCTCGACCACCAGAAGGGCGTGGACATCATCGGCGACGCGATGCCGTGGATCGCCGGGCAGGACGTGCAGGTGGTGATGCTGGGCACGGGGCGGCCGGACCTGGAGGAGATGCTGCGGCGGTTCGAGTCGGAGCACAACGACAAGGTGCGCGGGTGGGTGGGGTTCTCGGTGCAGCTGGCGCACCGGATCACGGCGGGCGCCGACGTCCTCCTGATGCCGTCGCGGTTCGAGCCGTGCGGGCTGAACCAGCTGTACGCCATGGCGTACGGCACCGTGCCCGTGGTGCACGCCGTGGGCGGGCTCCGCGACACGGTGGCGCCGTTCGACCCGTTCGCCGACACGGGGCTCGGGTGGACGTTCGACCGCGCCGAGGCGAACCGGATGATCGACGCGCTCGGGCACTGCCTCAACACGTACCGGAACTACAAGGAGAGCTGGAGGGGGCTCCAGGCGCGCGGCATGGCGCAGGACCTCAGCTGGGACCACGCCGCCGAGCTCTACGAGGACGTCCTCGTCAAGGCCAAGTACCAGTGGTGAGCTGGTGGTATTTTTCGCGACGCCTCTGGATCCCGCCGTGGATGGGCGCGCTTTTTCTCTAGGGCGGCTCTGCGTCGGAGACGCTCAGACGCATCGCGCGCGTTCGCGCCCACACGATGACTGGCACGCTGCTGCTGAGACGGCGGCACGCGATGCCATCATGCCACCGGACGGTAGGAGCAACGGTGGAAGTGAACTGTACTACTGGTGCTACACTGCTACTACATGAGATCTGCTCTTATTGGTCACGTACTCACGTTCACGCTGAATTACCGAATGTGTTGTGTCTTGTGTGTGTGTGTTAAAGGCATTGTCCTGGTAAATGGTGGAGACGAGATGGCCGGGTCGCGGGAGTTATATTTGTATATGTTGCCAGCTTTCTGAGTTTTTCAAGCCAGTGCGGCTCTTCAGTGCAGGTTCCAAGCAAGTTCAGTGCCGGATGTTAACCATGTTCTGAATCTTGTCTTTTCTTTCATATAAGCAGTGAAGCACAGGGCTTCTACTGACACTACCATGTCATGCTGCTATTTGGAACTGTGTTAGGGGATAGGAACACCATTAAACAACCCGGGATTCGCGCGCTCGTGTTAATGTCAATGACTAAATGACTGTGTTCCAATAATTGCCATCCCAAGATACTGCACGTACAAGGAAGAAACACAGCCGGAGACATCTCAGTCAGACGGCCATTGCGGCTGCTAGCTCAGTAGTACCAACAGTAGTACTCTATCCGTTTTACGATATAAGACTTTTTAATATTATCTATATTCATATATAGATATCAATAAATCTAGATATATAACTAAATATATATATATGTTTATGGTAA
CDS Sequence
- >LOC_Os02g51070.1
ATGTCGGGGGCAATCGCTTCCTCGCCGGCGGCTACTCTCTTCCTCGCTGGCTCCTCCTCCTCTTCGCCGCGGCGCAGGCGGAGCAGGGTGAGCGGGGTTTGGTGGCACTTGTATGGTGGCACGGGGCTGCGGTTGCATTGGGAGCGGCGGGGTTTGGTTCGGGACGGAGCCGTCGTGTGCTCGGCGTCGGCCGCCGGTGGTGAGGATGGCGTCGCGAAGGCGAAGACGAAGTCAGCGGGGAGCTCGAAGGCGGTCGCTGTGCAGGGCAGCACGGCCAAGGCTGATCATGTTGAGGATTCAGTTTCATCACCCAAATACGTGAAACCTGCCGTTGCGAAGCAAAATGGAGAGGTTGTGAGCAGAGCTACCAAATCTGATGCACCAGTGTCTAAACCCAAAGTTGACCCGTCAGTTCCTGCTTCCAAGGCTGAAGCTGATGGTAATGCACAAGCTGTGGAATCGAAGGCTGCACTGGACAAGAAGGAAGACGTCGGTGTTGCTGAACCGTTGGAAGCTAAGGCTGATGCTGGTGGAGATGCAGGTGCAGTAAGCTCTGCAGATGATAGTGAGAACAAGGAATCTGGTCCATTGGCAGGGCCAAATGTGATGAATGTCATTGTGGTGGCTTCTGAATGTTCTCCTTTCTGTAAAACAGGTGGTCTTGGAGATGTTGTGGGTGCTTTGCCTAAGGCTCTGGCAAGAAGAGGACATCGTGTTATGGTTGTGATACCAAGATACGGAGAATATGCAGAAGCCAAGGATCTAGGTGTCCGCAAACGTTACAGGGTAGCTGGACAGGATTCAGAAGTGAGTTATTTTCATGCTTTTATCGATGGTGTTGATTTTGTGTTTCTAGAGGCCCCTCCCTTTCGACACCGGCACAATGATATTTATGGAGGAGAAAGATTTGATGTTTTGAAGCGTATGATTTTGTTCTGCAAAGCTGCTGTTGAGGTTCCTTGGTTTGCTCCATGTGGTGGTTCCATCTACGGTGATGGCAATTTAGTCTTCATTGCAAATGATTGGCATACTGCACTTTTACCCGTATATTTGAAGGCATATTACCGAGATAATGGCTTGATGCAGTATACTCGCTCTGTTCTTGTGATACACAACATTGCTCATCAGGGTCGTGGCCCTGTAGATGACTTCGCCACGATGGACTTGCCCGAGCACTACATCGATCATTTCAGACTGTACGACCCCGTCGGCGGTGAGCACAGCAACGTGTTCGCCGCTGGCCTGAAGATGGCTGACCGCGCGGTCACCGTCAGCCATGGCTATCTGTGGGAGATCAAGACAATGGACGGTGGCTGGGGCCTCCACGAGATAATAAACCACAACGACTGGAAGCTGCAGGGCATCGTGAACGGCATCGACATGGCCGAATGGAACCCCGAGGTGGACGAGCACCTGCAGTCCGACGGCTACGCCAACTACACGTTCGAGACGCTGGACACCGGCAAGAAACAGTGCAAGGAGGCGCTGCAGCGGCAGCTGGGCCTGCAGGTCCGCGACGACGTGCCGCTGATCGGGTTCATCGGGCGGCTCGACCACCAGAAGGGCGTGGACATCATCGGCGACGCGATGCCGTGGATCGCCGGGCAGGACGTGCAGGTGGTGATGCTGGGCACGGGGCGGCCGGACCTGGAGGAGATGCTGCGGCGGTTCGAGTCGGAGCACAACGACAAGGTGCGCGGGTGGGTGGGGTTCTCGGTGCAGCTGGCGCACCGGATCACGGCGGGCGCCGACGTCCTCCTGATGCCGTCGCGGTTCGAGCCGTGCGGGCTGAACCAGCTGTACGCCATGGCGTACGGCACCGTGCCCGTGGTGCACGCCGTGGGCGGGCTCCGCGACACGGTGGCGCCGTTCGACCCGTTCGCCGACACGGGGCTCGGGTGGACGTTCGACCGCGCCGAGGCGAACCGGATGATCGACGCGCTCGGGCACTGCCTCAACACGTACCGGAACTACAAGGAGAGCTGGAGGGGGCTCCAGGCGCGCGGCATGGCGCAGGACCTCAGCTGGGACCACGCCGCCGAGCTCTACGAGGACGTCCTCGTCAAGGCCAAGTACCAGTGGTGA
Protein Sequence
- >LOC_Os02g51070.1
MSGAIASSPAATLFLAGSSSSSPRRRRSRVSGVWWHLYGGTGLRLHWERRGLVRDGAVVCSASAAGGEDGVAKAKTKSAGSSKAVAVQGSTAKADHVEDSVSSPKYVKPAVAKQNGEVVSRATKSDAPVSKPKVDPSVPASKAEADGNAQAVESKAALDKKEDVGVAEPLEAKADAGGDAGAVSSADDSENKESGPLAGPNVMNVIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYGEYAEAKDLGVRKRYRVAGQDSEVSYFHAFIDGVDFVFLEAPPFRHRHNDIYGGERFDVLKRMILFCKAAVEVPWFAPCGGSIYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSVLVIHNIAHQGRGPVDDFATMDLPEHYIDHFRLYDPVGGEHSNVFAAGLKMADRAVTVSHGYLWEIKTMDGGWGLHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCKEALQRQLGLQVRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGTGRPDLEEMLRRFESEHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVAPFDPFADTGLGWTFDRAEANRMIDALGHCLNTYRNYKESWRGLQARGMAQDLSWDHAAELYEDVLVKAKYQW*