Information report for OsRDR1
Gene Details
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Functional Descriptions
- Expression of miR444 is enhanced by infection of Rice stripe virus (RSV) and overexpression of miR444 improves rice resistance against RSV infection accompanied by upregulation of OsRDR1 expression.
- We also show that overexpression of miR444-resistant OsMADS57 reduced OsRDR1 expression and rice resistance against RSV infection and knockout of OsRDR1 reduced rice resistance against RSV infection.
Functional Keywords
Literature and News
- Both OsRecQ1 and OsRDR1 are required for the production of small RNA in response to DNA-damage in rice . DOI: 10.1371/journal.pone.0055252 ; PMID: 23383126
- Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice . DOI: 10.1186/1471-2164-9-451 ; PMID: 18826656
- A Signaling Cascade from miR444 to RDR1 in Rice Antiviral RNA Silencing Pathway . DOI: 10.1104/pp.15.01283 ; PMID: 26858364
Gene Resources
- UniProt: Q0DXS3
- EMBL: AK101440, AP008208, AP014958
- AlphaFoldDB: Q0DXS3
- EnsemblPlants: Os02t0736200-01
- Gramene: Os02t0736200-01
- KEGG: dosa:Os02g0736200
- InterPro: IPR007855
- PANTHER: PTHR23079, PTHR23079:SF1
- SWISS-MODEL: Q0DXS3
Sequences
cDNA Sequence
- >LOC_Os02g50330.1
GTCCTCGAATCCCTCTGCTCACTACCGTCGCGCTCGCTTATATTGCGGGAGTCGGCGACGAAAACCACCGAGCACCCGTCGGCGCAGCAGCGGCGGAGCGAAGGGAAGGGAAGGGAAGCCGCGATCCAGCCGCCGTCGACTCGCCGCCCACGCAGTCGCCGCCGAGCCCCATCTCCGCCACTGCTCGTTGTGATATGCGCCATGGGTGTCAAGACTTTACAGGTATCAGGGTTTGCTCTAGATGACAGTGCTGATTACGTCAAGGATTTGTTGGAGCGAATTGTTGGCTGTGGGAATGTGTATGCAGTAAAGCTCAGGCATCCAAAGAACGTCACTGCTACCTCAAGAGCATATGCTATAGTTCAGTTTCAGACCGAGGAACATGCTTCACTTGTAAAAAATGCGGCTCAAAGAAAGATACTCCGCCGTGGGCATTATTATCTGAAAGTCCATCCTTCAGATCGTGACATTGTTCCAAGACCAAGAGTTTCAATGTTCAAGCTAGAGGATGTAACACTGCATTTTGGTTGCCTGCTTAAGGAAACAATTTTATCTGCTCTGTGGAGTCGAAAAGGAGTTTCTGTTGAGTTTGGTTTCAATCTGAAAAAGATTTACTTTTACCTGCAGCTACCCAACAGCTCAATCGAATATAAACTTGAACTTTCCCATGAGAGCATATGGGAGATCCAGCTTCAACGCCCACCCAAGTCACAAACGAAGTTTCTTTTGATCCAGGTTCAAGCTGCACCTAAGATTTATGAACAGACACCACGCCGTTCTGGTGTTATGTACGAAGATCCATTATTCAACTATTTTAGGGATCATACAGATGATCAATGGACCAGGACAACGGATTTTACTTCATCTTCTAGCATTGGGCAATCATATATTTTATGTCTTGAGGTACCACGTCGATGTGATCTCCCAAACATTCGTGACTACTTCTTTTACTATCATGAGTACAATCATGACTTCGAGTGCCGGAGTGGGGGGTATCCATATTCAAGTGATACTCGCTTTGTTCCGATTGTGAAATCTCGTGGTTATGTCCCCTATGAGATACTCTTCAAGATCAACCATTTGGTTCAGAATGGGACACTTAGCGGACCGACAGTTGATGACAGCTTCTTTCGTCTGGTCAGCCCAGCTTTTGTACCTATTGACCATATAAAGCGTGCACTTGAAATGATGTCATATTTGAAAAAGACCTGCTTGAATCCAACAAGTTGGCTATCTGAACAATACTCAAAATTCCGGAGATCACGCTACGTCCAACCATCACCTAACATATCTCTGGATGATGGATTGGTTTATGTCTACAGTGTATTTTTATGGACCTGAGATTAATGTCTCCAATCGTGTGGTGCGGAATTTTTCTTCTGACATAGAGAATTTCCTTCGCATTTCATTTGTTGACGAGGACTGCGAGAAGCTCCGTGCAACTGATTTATCCCCCCGTTCTGCTTCAGGACATGATGCAAACAGAACTGCTCTGTATAAGAGAGTTCTGTCAGTCCTTTCAGATGGCATCACTATTGGTGGCAAGAACTTTGAGTTTCTTGCTTTTTCTTCAAGCCAGCTCCGAGATAACTCTGCATGGATGTTTGCTTCTCGCCAGGGATTAGCTGCTAGCGACATTAGGACATGGATGGGGGATTTCCGTAACATCAGAAATGTAGCAAAATATGCTGCAAGACTTGGTCAGTCTTTTAGTTCCTCAACCGAAACATTAAAGGTTCAGAAGTATGAGGTGGAAGAAATCTCAGATATAAAAAATGGTACACAGCATGTGTTCTCTGATGGGATTGGAAAGATATCATCTGCTTTTGCTAATGAAGTGGCCATGAAGTGCAACCTGAAACGCTTTGCTCCTTCTGCTTTTCAAATAAGGTATGGTGGTTATAAAGGTGTTGTTGCTGTTGACCCTACATCACGCTGGAAGCTTTCCTTAAGAAAAAGCATGCTAAAGTTTCAGTCAGACAATATCACAGTAGATGTCCTTGCATACAGCAAGTACCAGCCAGGCTTCCTTAATCGGCAGCTAATTACTCTTCTTTCGACACTTGGAGTTAGAGATAGTGTCTTTGAACAGAAGCAAGAAGAAGCAGTGAATCAGTTGAACAAAATGGTTACTGATCCTCAAGCTGCTATCGAAGCAATTGAACTTATGCCCATGGGAGAAATAACAAATGCAGTTAAAGAGCTGTTGTTGTGTGGCTACCAGCCTGATGATGAACCATATCTTTCTATGCTGCTACAAACTTTTAGGGCATCCAAATTACTAGAGCTGAAAACCAAGTCAAGGATATTAATCCCAAAAGGACGAGCAATGATGGGATGCTTGGATGAAACACGTACGCTGAAGTATGGGCAAGTGTTCATTCGAGCTACTTCGGGTGTAAATGACAATGACAGGTTCACCGTGACAGGAAAAGTTGTGATTGCCAAAAACCCTTGCCTCCACCCAGGTGATATACGGATTCTCCATGCTGTTGATGTTCCTGTTTTGCACCACATGTTTAACTGTGTCGTCTTTCCACAGCAAGGACCAAGGCCGCATCCTAATGAGTGTTCAGGGAGTGATCTTGACGGGGACATATATTTTGTTTCTTGGGACCCATCTCTCATTCCGCCTCGTATGGTGACACCTATGGACTATACTCCAGCACCAACAGAAACATTAGACCATGATGTTACAATTGAGGAAGTAGAAGAGTACTTCACAAATTACATAGTCAATGAGAGTTTAGGAATGATTGCCAATGCACATGTAGTATTTGCGGATAAGGAAGACCTCAAGGCAGAGAGTTCACCATGCATTGAGCTGGCCAAGCTCTTCTCCATTGCTGTTGACTTTCCCAAAACTGGAGTGCCAGCCCTGATTCCTCCTGAACTACATGTGAAGGAGTATCCTGATTTCATGGAGAAGCTTGACAAAGTCACCTATGAATCAAAAGGAGTAATCGGGAAGCTCTACAGGGAAATAAAGAAGCACACCCCTCACATAAAGCACTTCACAAGGGAGGTGGCAAGGCGGTCTTATGACACCGATATGATTGTTGATGGCTATGAAGATTACATCACTGAAGCTATGGCATTGAAGGACGAGTACGACTTCAAATTGGGTAATCTTATGGATCACTATGGAATAAAAAGTGAGGCCGAGATAATAAGTGGATGCATTCTTAAGATGGCAAAGAATTTCACAAAGAAAAGCGATGCTGATGCTATCAGATTGGCGGTGAGATCTTTGCGTAAGGAAGCAAGGTCAAGGTTCAGTGAGATGAGCTTAGATGATAATGGGCATGGCCATGATGCCTCCGAAGCCAAGGCATCCGCCTGGTACCATGTCACTTACCACCCTGAATTCTGGGGTTGCTACAATGAAGGATATGAGCGACCACACTTTATCAGCTTTCCATGGTGTATCTATGAGAAGCTTTTGCGCATTAAGCAAAGGAGGAAGTTCGTCAGGAAGATGCAGCCCGAGTTGTTCTCTCTCCACAACTTGAGAATTTGAGTGTGGCCAGCATGTTTGCTCTTATACATATATCTGAACTTTTGCATTGAACATGTCTATTCTGGTGCTTGAATGCTTACTG
CDS Sequence
- >LOC_Os02g50330.1
ATGATGGATTGGTTTATGTCTACAGTGTATTTTTATGGACCTGAGATTAATGTCTCCAATCGTGTGGTGCGGAATTTTTCTTCTGACATAGAGAATTTCCTTCGCATTTCATTTGTTGACGAGGACTGCGAGAAGCTCCGTGCAACTGATTTATCCCCCCGTTCTGCTTCAGGACATGATGCAAACAGAACTGCTCTGTATAAGAGAGTTCTGTCAGTCCTTTCAGATGGCATCACTATTGGTGGCAAGAACTTTGAGTTTCTTGCTTTTTCTTCAAGCCAGCTCCGAGATAACTCTGCATGGATGTTTGCTTCTCGCCAGGGATTAGCTGCTAGCGACATTAGGACATGGATGGGGGATTTCCGTAACATCAGAAATGTAGCAAAATATGCTGCAAGACTTGGTCAGTCTTTTAGTTCCTCAACCGAAACATTAAAGGTTCAGAAGTATGAGGTGGAAGAAATCTCAGATATAAAAAATGGTACACAGCATGTGTTCTCTGATGGGATTGGAAAGATATCATCTGCTTTTGCTAATGAAGTGGCCATGAAGTGCAACCTGAAACGCTTTGCTCCTTCTGCTTTTCAAATAAGGTATGGTGGTTATAAAGGTGTTGTTGCTGTTGACCCTACATCACGCTGGAAGCTTTCCTTAAGAAAAAGCATGCTAAAGTTTCAGTCAGACAATATCACAGTAGATGTCCTTGCATACAGCAAGTACCAGCCAGGCTTCCTTAATCGGCAGCTAATTACTCTTCTTTCGACACTTGGAGTTAGAGATAGTGTCTTTGAACAGAAGCAAGAAGAAGCAGTGAATCAGTTGAACAAAATGGTTACTGATCCTCAAGCTGCTATCGAAGCAATTGAACTTATGCCCATGGGAGAAATAACAAATGCAGTTAAAGAGCTGTTGTTGTGTGGCTACCAGCCTGATGATGAACCATATCTTTCTATGCTGCTACAAACTTTTAGGGCATCCAAATTACTAGAGCTGAAAACCAAGTCAAGGATATTAATCCCAAAAGGACGAGCAATGATGGGATGCTTGGATGAAACACGTACGCTGAAGTATGGGCAAGTGTTCATTCGAGCTACTTCGGGTGTAAATGACAATGACAGGTTCACCGTGACAGGAAAAGTTGTGATTGCCAAAAACCCTTGCCTCCACCCAGGTGATATACGGATTCTCCATGCTGTTGATGTTCCTGTTTTGCACCACATGTTTAACTGTGTCGTCTTTCCACAGCAAGGACCAAGGCCGCATCCTAATGAGTGTTCAGGGAGTGATCTTGACGGGGACATATATTTTGTTTCTTGGGACCCATCTCTCATTCCGCCTCGTATGGTGACACCTATGGACTATACTCCAGCACCAACAGAAACATTAGACCATGATGTTACAATTGAGGAAGTAGAAGAGTACTTCACAAATTACATAGTCAATGAGAGTTTAGGAATGATTGCCAATGCACATGTAGTATTTGCGGATAAGGAAGACCTCAAGGCAGAGAGTTCACCATGCATTGAGCTGGCCAAGCTCTTCTCCATTGCTGTTGACTTTCCCAAAACTGGAGTGCCAGCCCTGATTCCTCCTGAACTACATGTGAAGGAGTATCCTGATTTCATGGAGAAGCTTGACAAAGTCACCTATGAATCAAAAGGAGTAATCGGGAAGCTCTACAGGGAAATAAAGAAGCACACCCCTCACATAAAGCACTTCACAAGGGAGGTGGCAAGGCGGTCTTATGACACCGATATGATTGTTGATGGCTATGAAGATTACATCACTGAAGCTATGGCATTGAAGGACGAGTACGACTTCAAATTGGGTAATCTTATGGATCACTATGGAATAAAAAGTGAGGCCGAGATAATAAGTGGATGCATTCTTAAGATGGCAAAGAATTTCACAAAGAAAAGCGATGCTGATGCTATCAGATTGGCGGTGAGATCTTTGCGTAAGGAAGCAAGGTCAAGGTTCAGTGAGATGAGCTTAGATGATAATGGGCATGGCCATGATGCCTCCGAAGCCAAGGCATCCGCCTGGTACCATGTCACTTACCACCCTGAATTCTGGGGTTGCTACAATGAAGGATATGAGCGACCACACTTTATCAGCTTTCCATGGTGTATCTATGAGAAGCTTTTGCGCATTAAGCAAAGGAGGAAGTTCGTCAGGAAGATGCAGCCCGAGTTGTTCTCTCTCCACAACTTGAGAATTTGA
Protein Sequence
- >LOC_Os02g50330.1
MMDWFMSTVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTALYKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVAKYAARLGQSFSSSTETLKVQKYEVEEISDIKNGTQHVFSDGIGKISSAFANEVAMKCNLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGFLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRATSGVNDNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPHIKHFTREVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPWCIYEKLLRIKQRRKFVRKMQPELFSLHNLRI*