Gene Details:
- MSU gene ID: LOC_Os02g49370
- RAPdb gene ID: Os02g0725700
- Gene Symbol: OsHAP3E LEC1 OsLEC1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The OsHAP3E-overexpressing plants showed various abnormal morphologies both in their vegetative and reproductive phases.
- The OsHAP3E-overexpressing plants were dwarf with erected leaves and similar to brassinosteroid mutants in the vegetative phase.
- Altogether, our loss-of-function and gain-of-function analyses suggest that OsHAP3E plays important pleiotropic roles in vegetative and reproductive development or basic cellular processes in rice.
- Aberrant vegetative and reproductive development by overexpression and lethality by silencing of OsHAP3E in rice.
- These phenotypes indicate association of OsHAP3E with determination of floral meristem identity.
- OsLEC1/OsHAP3E participates in the determination of meristem identity in both vegetative and reproductive developments of rice.
- OsLEC1 mutant seeds lost desiccation tolerance and triggered embryo greening at the early development stage.
- Our findings suggested that OsLEC1 acts as not only a central regulator of seed maturation but also an inhibitor of embryo greening during rice seed development.
- This study would provide new understanding for the OsLEC1 regulatory mechanisms on photosynthesis in the monocot seed development.
- Transcriptome analysis demonstrated that OsLEC1 mutation altered diverse hormonal pathways and stress response in seed maturation, and promoted a series of photosynthesis-related genes.
- Further, genome-wide identification of OsLEC1-binding sites demonstrated that OsLEC1 bound to genes involved in photosynthesis, photomorphogenesis, as well as abscisic acid (ABA) and gibberellin (GA) pathways, involved in seed maturation.
Function-related keywords:
- vegetative , dwarf , meristem , erect , floral-meristem , reproductive , brassinosteroid , floral , development , seed , photosynthesis , tolerance , gibberellin , stress , abscisic-acid , Gibberellin , seed-development , stress-response , embryo
Literature:
- Aberrant vegetative and reproductive development by overexpression and lethality by silencing of OsHAP3E in rice . DOI: 10.1016/j.plantsci.2011.04.009 ; PMID: 21683874
- Identification, characterization and interaction of HAP family genes in rice . DOI: 10.1007/s00438-007-0312-3 ; PMID: 18193457
- OsLEC1/OsHAP3E participates in the determination of meristem identity in both vegetative and reproductive developments of rice . DOI: 10.1111/jipb.12025 ; PMID: 23230849
- Rice LEAFY COTYLEDON1 Hinders Embryo Greening During the Seed Development . DOI: 10.3389/fpls.2022.887980 ; PMID: 35620685
Related News:
Gene Resources:
- NCBI ID: AB288036
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os02g49370.1
CACACTTTAGCTGCTAGCTAGTGCTACCACCCACAGGAGGCAACCCTAGCTTTCCCACGCAGCCAATGGAGGCCGGCTACCCGGGCACGGCGGCGAACGGCGCTGCCGCCGACGGGAACGGTGGCGCGCAGCAGGCGGCGGCCGCGCCGGCTATACGTGAGCAGGACCGGCTGATGCCGATCGCGAACGTGATCCGCATCATGCGCCGCGTGCTCCCGGCGCACGCCAAGATCTCGGACGACGCCAAGGAGACGATCCAGGAGTGCGTGTCGGAGTACATCAGCTTCATCACCGGGGAGGCCAACGAGCGGTGCCAGCGCGAGCAGCGCAAGACCATCACCGCCGAGGACGTGCTCTGGGCCATGAGCCGCCTCGGCTTCGACGACTACGTCGAGCCCCTCGGCGTCTACCTCCACCGCTACCGCGAGTTCGAGGGGGAGTCCCGCGGCGTCGGCGTCGGCGTCGGCGCCGCGCGCGGCGACCACCACCATGGTCACGTCGGTGGGATGCTCAAGTCCCGCGCGCAGGGCTCCATGGTGACGCACCACGACATGCAGATGCACGCCGCCATGTACGGTGGCGGCGCGGTGCCGCCGCCGCCGCATCCTCCTCCGCACCACCACGCGTTCCACCAGCTCATGCCGCCGCACCACGGCCAGTACGCGCCGCCGTACGACATGTACGGCGGCGAGCACGGGATGGCGGCGTACTACGGCGGGATGTACGCGCCCGGCAGCGGCGGCGACGGGAGCGGCAGCAGCGGCAGCGGTGGCGCCGGCACGCCGCAGACCGTCAACTTCGAGCACCAGCATCCGTTCGGATACAAGTAGTAACAGCAGCAGAATGGCGATCGGTCTGCACCTGCATGCACACGTATCGCATGCAGATCGAGCTAGTAGTGCAACTGGCTAACTTGAACCAGTTAAAAACTTAAGACTTAGTGATCGTGTGTGGTTTAATTAATTTGCTACGTTCAGGTAGTGATCGATGAGATTTTAATTTCCTACTGTCAGTTTAATTCACCGTTCATGTACTCGATCCAGCTAGTACTACTCCTAGTTACCCTTGTTCTAATCTTAACGCAATTGTGTCGATCGGACGATCGCACGTTTATCTTCAAGTGGAATTTGTCTTATAACACTAATTAAGCGCCTGGAAGCTTATGTACA - >LOC_Os02g49370.2
CACACTTTAGCTGCTAGCTAGTGCTACCACCCACAGGAGGCAACCCTAGCTTTCCCACGCAGCCAATGGAGGCCGGCTACCCGGGCACGGCGGCGAACGGCGCTGCCGCCGACGGGAACGGTGGCGCGCAGCAGGCGGCGGCCGCGCCGGCTATACGTGAGCAGGACCGGCTGATGCCGATCGCGAACGTGATCCGCATCATGCGCCGCGTGCTCCCGGCGCACGCCAAGATCTCGGACGACGCCAAGGAGACGATCCAGGAGTGCGTGTCGGAGTACATCAGCTTCATCACCGGGGAGGCCAACGAGCGGTGCCAGCGCGAGCAGCGCAAGACCATCACCGCCGAGGACGTGCTCTGGGCCATGAGCCGCCTCGGCTTCGACGACTACGTCGAGCCCCTCGGCGTCTACCTCCACCGCTACCGCGAGTTCGAGGGGGAGTCCCGCGGCGTCGGCGTCGGCGTCGGCGCCGCGCGCGGCGACCACCACCATGGTCACGTCGGTGGGATGCTCAAGTCCCGCGCGCAGGGCTCCATGGTGACGCACCACGACATGCAGATGCACGCCGCCATGTACGGTGGCGGCGCGGTGCCGCCGCCGCCGCATCCTCCTCCGCACCACCACGCGTTCCACCAGCTCATGCCGCCGCACCACGGCCAGTACGCGCCGCCGTACGACATGTACGGCGGCGAGCACGGGATGGCGGCGTACTACGGCGGGATGTACGCGCCCGGCAGCGGCGGCGACGGGAGCGGCAGCAGCGGCAGCGGTGGCGCCGGCACGCCGCAGACCGTCAACTTCGAGCACCAGCATCCGTTCGGATACAAGTAGTAACAGCAGCAGAATGGCGATCGGTCTGCACCTGCATGCACACGTATCGCATGCAGATCGAGCTAGTAGTGCAACTGGCTAACTTGAACCAGTTAAAAACTTAAGACTTAGTGATCGTGTGTGGTTTAATTAATTTGCTACGTTCAGGTAGTGATCGATGAGATTTTAATTTCCTACTGTCAGTTTAATTCACCGTTCATGTACTCGATCCAGCTAGTACTACTCCTAGTTACCCTTGTTCTAATCTTAACGCAATTGTGTCGATCGGACGATCGCACGTTTATCTTCAAGTGGAATTTGTCTTATAACACTAATTAAGCGCCTGGAAGCTTATGTACA
CDS Sequence
- >LOC_Os02g49370.1
ATGGAGGCCGGCTACCCGGGCACGGCGGCGAACGGCGCTGCCGCCGACGGGAACGGTGGCGCGCAGCAGGCGGCGGCCGCGCCGGCTATACGTGAGCAGGACCGGCTGATGCCGATCGCGAACGTGATCCGCATCATGCGCCGCGTGCTCCCGGCGCACGCCAAGATCTCGGACGACGCCAAGGAGACGATCCAGGAGTGCGTGTCGGAGTACATCAGCTTCATCACCGGGGAGGCCAACGAGCGGTGCCAGCGCGAGCAGCGCAAGACCATCACCGCCGAGGACGTGCTCTGGGCCATGAGCCGCCTCGGCTTCGACGACTACGTCGAGCCCCTCGGCGTCTACCTCCACCGCTACCGCGAGTTCGAGGGGGAGTCCCGCGGCGTCGGCGTCGGCGTCGGCGCCGCGCGCGGCGACCACCACCATGGTCACGTCGGTGGGATGCTCAAGTCCCGCGCGCAGGGCTCCATGGTGACGCACCACGACATGCAGATGCACGCCGCCATGTACGGTGGCGGCGCGGTGCCGCCGCCGCCGCATCCTCCTCCGCACCACCACGCGTTCCACCAGCTCATGCCGCCGCACCACGGCCAGTACGCGCCGCCGTACGACATGTACGGCGGCGAGCACGGGATGGCGGCGTACTACGGCGGGATGTACGCGCCCGGCAGCGGCGGCGACGGGAGCGGCAGCAGCGGCAGCGGTGGCGCCGGCACGCCGCAGACCGTCAACTTCGAGCACCAGCATCCGTTCGGATACAAGTAG - >LOC_Os02g49370.2
ATGGAGGCCGGCTACCCGGGCACGGCGGCGAACGGCGCTGCCGCCGACGGGAACGGTGGCGCGCAGCAGGCGGCGGCCGCGCCGGCTATACGTGAGCAGGACCGGCTGATGCCGATCGCGAACGTGATCCGCATCATGCGCCGCGTGCTCCCGGCGCACGCCAAGATCTCGGACGACGCCAAGGAGACGATCCAGGAGTGCGTGTCGGAGTACATCAGCTTCATCACCGGGGAGGCCAACGAGCGGTGCCAGCGCGAGCAGCGCAAGACCATCACCGCCGAGGACGTGCTCTGGGCCATGAGCCGCCTCGGCTTCGACGACTACGTCGAGCCCCTCGGCGTCTACCTCCACCGCTACCGCGAGTTCGAGGGGGAGTCCCGCGGCGTCGGCGTCGGCGTCGGCGCCGCGCGCGGCGACCACCACCATGGTCACGTCGGTGGGATGCTCAAGTCCCGCGCGCAGGGCTCCATGGTGACGCACCACGACATGCAGATGCACGCCGCCATGTACGGTGGCGGCGCGGTGCCGCCGCCGCCGCATCCTCCTCCGCACCACCACGCGTTCCACCAGCTCATGCCGCCGCACCACGGCCAGTACGCGCCGCCGTACGACATGTACGGCGGCGAGCACGGGATGGCGGCGTACTACGGCGGGATGTACGCGCCCGGCAGCGGCGGCGACGGGAGCGGCAGCAGCGGCAGCGGTGGCGCCGGCACGCCGCAGACCGTCAACTTCGAGCACCAGCATCCGTTCGGATACAAGTAG
Protein Sequence
- >LOC_Os02g49370.1
MEAGYPGTAANGAAADGNGGAQQAAAAPAIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSRLGFDDYVEPLGVYLHRYREFEGESRGVGVGVGAARGDHHHGHVGGMLKSRAQGSMVTHHDMQMHAAMYGGGAVPPPPHPPPHHHAFHQLMPPHHGQYAPPYDMYGGEHGMAAYYGGMYAPGSGGDGSGSSGSGGAGTPQTVNFEHQHPFGYK* - >LOC_Os02g49370.2
MEAGYPGTAANGAAADGNGGAQQAAAAPAIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSRLGFDDYVEPLGVYLHRYREFEGESRGVGVGVGAARGDHHHGHVGGMLKSRAQGSMVTHHDMQMHAAMYGGGAVPPPPHPPPHHHAFHQLMPPHHGQYAPPYDMYGGEHGMAAYYGGMYAPGSGGDGSGSSGSGGAGTPQTVNFEHQHPFGYK*