Gene Details:

Functional Descriptions:

  • These results strongly suggest that OsYSL15 is the dominant iron(III)-deoxymugineic acid transporter responsible for iron uptake from the rhizosphere and is also responsible for phloem transport of iron.
  • Rice OsYSL15 is an iron-regulated iron(III)-deoxymugineic acid transporter expressed in the roots and is essential for iron uptake in early growth of the seedlings.
  • Expression of OsYSL15 in root epidermis and stele was induced by iron deficiency and showed daily fluctuation.
  • OsYSL15 restored a yeast mutant defective in iron uptake when supplied with iron(III)-deoxymugineic acid and transported iron(III)-deoxymugineic acid in Xenopus laevis oocytes.
  • OsYSL15 promoter-beta-glucuronidase analysis revealed that OsYSL15 expression in roots was dominant in the epidermis/exodermis and phloem cells under conditions of iron deficiency and was detected only in phloem under iron sufficiency.
  • OsYSL15 knockdown seedlings showed severe arrest in germination and early growth and were rescued by high iron supply.
  • These results demonstrate that rice OsYSL15 plays a crucial role in iron homeostasis during the early stages of growth.
  • Two insertional OsYSL15 mutants exhibited chlorotic phenotypes under Fe deficiency and had reduced Fe concentrations in their shoots, roots, and seeds.
  • Overexpression of OsYSL15 increased the Fe concentration in leaves and seeds from transgenic plants.
  • OsYSL15 was also expressed in flowers, developing seeds, and in the embryonic scutellar epithelial cells during seed germination.
  • RNA interference of OsIRO2 in transgenic rice showed that ethylene acted via this transcription factor to induce the expression of OsNAS1, OsNAS2, OsYSL15, and OsIRT1.
  • The OsYSL15 promoter fusion to beta-glucuronidase showed that it was expressed in all root tissues when Fe was limited.
  • We have characterized OsYSL15, one of the rice (Oryza sativa) YS1-like (YSL) genes that are strongly induced by iron (Fe) deficiency.
  • Disruption of OsYSL15 leads to iron inefficiency in rice plants.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os02g43410.1
    ACCCCTGCATCACTCGAACTTGCAAGCTGCAGAGCTCACGTTGAGCAGTGAGCAACTGTTCCATTGGCGCACTGATCGAACGAGCAGTGCGAACTTGAGATCGAGCAGCTAAGCGAGATCGACGCCGCCGCCGCCGCCATGGAGCACGCCGACGCGGACCGCACGCGGGTGGCGCCCGAGATCGGGAGCCTGCACGACGAGGACGCGGAGGCGGACCCGGCGCGGGCGCGGGAGATGGAGCGGCTGCAGCCGTGGCGGGAGCAGGTGACGGCGCGCGGGGTGGTGGCGGCGGCGCTGATCGGGTTCGTGTTCAGCGTCATCGTGATGAAGATCGCGCTCACCACGGGGCTGGTGCCCACGCTCAACATCTCCGCCGCGCTGCTCGCCTTCCTCGCGCTCCGCGGCTGGACGCGCGCGCTGGAGCGCCTCGGCTTCTCGCCGCGGCCCTTCACGCGGCAGGAGAACACCGTCGTCCAGACCTGCGCCGTCGCCTGCTACACCATAGCCTTCGGCGGTGGGTTCGGATCGACATTGCTGGGCCTGAACAAGAGGACGTACGAGCTGGCCGGGAACTCACCAGGCAATGTGCCAGGGAGCTATAAGGAGCCTGGGATTGGCTGGATGGTAGGGCTCCTCCTGGCTATTAGCTTCGCGGGTAACCTCAGCTTGATTCCCCTAAGAAAGGCTTTGGTCGTAGACTACAAATTAACTTATCCAAGTGGAACTGCAACAGCTGTTCTTATCAACGGGTTCCACACAGCCCAAGGAGATAAGAATGCAAAATTGCAACTCCATGGGTTTCTAAAATATTTTGGGCTTAGCTTATTTTGGAGCTTCTTCCAATGGTTCTACACGGGAGGCAATGCCTGTGGATTTGTTCAGTTCCCTACTTTTGGTCTGAAAGCCTGGAAACAATCATTCTTCTTTGATTTTAGCCTCACATATGTTGGTGCGGGGATGATTTGCTCACACCTTGTGAACCTCTCTACCCTCCTTGGTGCGGTCATTTCATGGGGAATAATGTGGCCACTTATCAGCAAACATAAGGGGGACTGGTACCCTGCAAACATACCTGAAAGCAGCATGACAAGTTTGTATGGTTACAAGTCGTTTTTATGCATTGCTCTGATTATGGGGGATGGCCTGTACCATTTTGTTAAAGTTACCGGTGTCACTGCTAAGAGTTTACATAATAGATTTAACCGAAAAAGTGTTAGCAACACAGCATCAGAGGAGGGTGATATGGTTTCATTAGATGATCTACAACGTGATGAGGTATTCAAGAGGGGTACTGTCCCTTCTTGGATGGCATACAGTGGTTACTTCTTGCTAAGCATCATTGCGGTAATCACCATACCGATAATGTTTCGACAAGTGAAGTGGTACTACGTGATCATAGCCTACGCGCTCGGCCCGGTGCTAGGATTCGCCAATTCCTACGGAGCAGGGCTCACGGACATCAACATGGGGTACAACTACGGCAAGATCGCTCTCTTCGTCTTTGCAGCTTGGGCTGGCAAGGACAATGGCGTCATAGCCGGCCTTGTGGTTGGCACCCTGGTGAAGCAGCTGGTGCTCGTCTCTGCCGATCTGATGCACGATCTCAAGACGGGACATCTCACCTTGACATCGCCGAGGTCCATGCTCGTGGGAGAGCTCATCGGGACAGGCATTGGCTGCTTCATCGCGCCACTGACGTTCATGCTGTTCTACAGGGCGTTTGACATCGGGAACCCCGATGGCTACTGGAAGGCGCCATACGCGCTGATCTACCGCAACATGGCGATCCTCGGGATCGAGGGCATCTCGGCGCTGCCCAAGCACTGCCTCTCGCTCTCCGTCGGGTTCTTCGCGTTCGCCGTGCTCACGAACGTGGCGAGGGACGCCCTGCCGGCGAGGTACAAGAAGCTCGTGCCGCTGCCGACGGCGATGGCCGTGCCGTTCCTCGTAGGGGCGAGCTTCGCCATCGACATGTGCGTCGGGAGCCTGGTGCTGTTTGCTTGGAACAAGATGAACAAGAAGGAGGCTGCCTTCATGGTGCCTGCTGTTGCGTCTGGGCTCATGTGTGGCGATGGCATTTGGACCTTCCCTTCTTCTATCCTTGCTCTCGCTAAGATTAAGCCACCGATCTGCATGAAGTTTACGCCTGGAAGCTAAGAGGTGTAGTGTGTTTAATTTCATGGGTGGAGGATTGCAGAAATAAACAGTGATGATTAACTGTAAATGTGTCTTTTGGTTGTAGTGAGCTGCTGTTTGCCTATGATCCAAGTCATGTTTGTGTTTTAATTTACCTATCGAATTAGCTGTGTTTGTACACTTGTACATTTTATAACTTGAGAATTGTTTAGTTTGGCATACATAAAATATGTTATAACTTTTTTTACTCACATGTATAGGATTGATGACTACTACACTGTAATCTCAACTAAGGTTGTGTTCGAGTATCAATTATTATAATCTTTAAAATAAATTTGTTTAA
  • >LOC_Os02g43410.2
    ACCCCTGCATCACTCGAACTTGCAAGCTGCAGAGCTCACGTTGAGCAGTGAGCAACTGTTCCATTGGCGCACTGATCGAACGAGCAGTGCGAACTTGAGATCGAGCAGCTAAGCGAGATCGACGCCGCCGCCGCCGCCATGGAGCACGCCGACGCGGACCGCACGCGGGTGGCGCCCGAGATCGGGAGCCTGCACGACGAGGACGCGGAGGCGGACCCGGCGCGGGCGCGGGAGATGGAGCGGCTGCAGCCGTGGCGGGAGCAGGTGACGGCGCGCGGGGTGGTGGCGGCGGCGCTGATCGGGTTCGTGTTCAGCGTCATCGTGATGAAGATCGCGCTCACCACGGGGCTGGTGCCCACGCTCAACATCTCCGCCGCGCTGCTCGCCTTCCTCGCGCTCCGCGGCTGGACGCGCGCGCTGGAGCGCCTCGGCTTCTCGCCGCGGCCCTTCACGCGGCAGGAGAACACCGTCGTCCAGACCTGCGCCGTCGCCTGCTACACCATAGCCTTCGGCGGTGGGTTCGGATCGACATTGCTGGGCCTGAACAAGAGGACGTACGAGCTGGCCGGGAACTCACCAGGCAATGTGCCAGGGAGCTATAAGGAGCCTGGGATTGGCTGGATGGTAGGGCTCCTCCTGGCTATTAGCTTCGCGGGTAACCTCAGCTTGATTCCCCTAAGAAAGGCTTTGGTCGTAGACTACAAATTAACTTATCCAAGTGGAACTGCAACAGCTGTTCTTATCAACGGGTTCCACACAGCCCAAGGAGATAAGAATGCAAAATTGCAACTCCATGGGTTTCTAAAATATTTTGGGCTTAGCTTATTTTGGAGCTTCTTCCAATGGTTCTACACGGGAGGCAATGCCTGTGGATTTGTTCAGTTCCCTACTTTTGGTCTGAAAGCCTGGAAACAATCATTCTTCTTTGATTTTAGCCTCACATATGTTGGTGCGGGGATGATTTGCTCACACCTTGTGAACCTCTCTACCCTCCTTGGTGCGGTCATTTCATGGGGAATAATGTGGCCACTTATCAGCAAACATAAGGGGGACTGGTACCCTGCAAACATACCTGAAAGCAGCATGACAAGTTTGTATGGTTACAAGTCGTTTTTATGCATTGCTCTGATTATGGGGGATGGCCTGTACCATTTTGTTAAAGTTACCGGTGTCACTGCTAAGAGTTTACATAATAGATTTAACCGAAAAAGTGTTAGCAACACAGCATCAGAGGAGGGTGATATGGTTTCATTAGATGATCTACAACGTGATGAGGTATTCAAGAGGGGTACTGTCCCTTCTTGGATGGCATACAGTGGTTACTTCTTGCTAAGCATCATTGCGGTAATCACCATACCGATAATGTTTCGACAAGTGAAGTGGTACTACGTGATCATAGCCTACGCGCTCGGCCCGGTGCTAGGATTCGCCAATTCCTACGGAGCAGGGCTCACGGACATCAACATGGGGTACAACTACGGCAAGATCGCTCTCTTCGTCTTTGCAGCTTGGGCTGGCAAGGACAATGGCGTCATAGCCGGCCTTGTGGTTGGCACCCTGGTGAAGCAGCTGGTGCTCGTCTCTGCCGATCTGATGCACGATCTCAAGACGGGACATCTCACCTTGACATCGCCGAGGTCCATGCTCGTGGGAGAGCTCATCGGGACAGGCATTGGCTGCTTCATCGCGCCACTGACGTTCATGCTGTTCTACAGGGCGTTTGACATCGGGAACCCCGATGGCTACTGGAAGGCGCCATACGCGCTGATCTACCGCAACATGGCGATCCTCGGGATCGAGGGCATCTCGGCGCTGCCCAAGCACTGCCTCTCGCTCTCCGTCGGGTTCTTCGCGTTCGCCGTGCTCACGAACGTGGCGAGGGACGCCCTGCCGGCGAGGTACAAGAAGCTCGTGCCGCTGCCGACGGCGATGGCCGTGCCGTTCCTCGTAGGGGCGAGCTTCGCCATCGACATGTGCGTCGGGAGCCTGGTGCTGTTTGCTTGGAACAAGATGAACAAGAAGGAGGCTGCCTTCATGGTGCCTGCTGTTGCGTCTGGGCTCATGTGTGGCGATGGCATTTGGACCTTCCCTTCTTCTATCCTTGCTCTCGCTAAGATTAAGCCACCGATCTGCATGAAGTTTACGCCTGGAAGCTAAGAGGTGTAGTGTGTTTAATTTCATGGGTGGAGGATTGCAGAAATAAACAGTGATGATTAACTGTAAATGTGTCTTTTGGTTGTAGTGAGCTGCTGTTTGCCTATGATCCAAGTCATGTTTGTGTTTTAATTTACCTATCGAATTAGCTGTGTTTGTACACTTGTACATTTTATAACTTGAGAATTGTTTAGTTTGGCATACATAAAATATGTTATAACTTTTTTTACTCACATGTATAGGATTGATGACTACTACACTGTAATCTCAACTAAGGTTGTGTTCGAGTATCAATTATTATAATCTTTAAAATAAATTTGTTTAA
CDS Sequence
  • >LOC_Os02g43410.1
    ATGGAGCACGCCGACGCGGACCGCACGCGGGTGGCGCCCGAGATCGGGAGCCTGCACGACGAGGACGCGGAGGCGGACCCGGCGCGGGCGCGGGAGATGGAGCGGCTGCAGCCGTGGCGGGAGCAGGTGACGGCGCGCGGGGTGGTGGCGGCGGCGCTGATCGGGTTCGTGTTCAGCGTCATCGTGATGAAGATCGCGCTCACCACGGGGCTGGTGCCCACGCTCAACATCTCCGCCGCGCTGCTCGCCTTCCTCGCGCTCCGCGGCTGGACGCGCGCGCTGGAGCGCCTCGGCTTCTCGCCGCGGCCCTTCACGCGGCAGGAGAACACCGTCGTCCAGACCTGCGCCGTCGCCTGCTACACCATAGCCTTCGGCGGTGGGTTCGGATCGACATTGCTGGGCCTGAACAAGAGGACGTACGAGCTGGCCGGGAACTCACCAGGCAATGTGCCAGGGAGCTATAAGGAGCCTGGGATTGGCTGGATGGTAGGGCTCCTCCTGGCTATTAGCTTCGCGGGTAACCTCAGCTTGATTCCCCTAAGAAAGGCTTTGGTCGTAGACTACAAATTAACTTATCCAAGTGGAACTGCAACAGCTGTTCTTATCAACGGGTTCCACACAGCCCAAGGAGATAAGAATGCAAAATTGCAACTCCATGGGTTTCTAAAATATTTTGGGCTTAGCTTATTTTGGAGCTTCTTCCAATGGTTCTACACGGGAGGCAATGCCTGTGGATTTGTTCAGTTCCCTACTTTTGGTCTGAAAGCCTGGAAACAATCATTCTTCTTTGATTTTAGCCTCACATATGTTGGTGCGGGGATGATTTGCTCACACCTTGTGAACCTCTCTACCCTCCTTGGTGCGGTCATTTCATGGGGAATAATGTGGCCACTTATCAGCAAACATAAGGGGGACTGGTACCCTGCAAACATACCTGAAAGCAGCATGACAAGTTTGTATGGTTACAAGTCGTTTTTATGCATTGCTCTGATTATGGGGGATGGCCTGTACCATTTTGTTAAAGTTACCGGTGTCACTGCTAAGAGTTTACATAATAGATTTAACCGAAAAAGTGTTAGCAACACAGCATCAGAGGAGGGTGATATGGTTTCATTAGATGATCTACAACGTGATGAGGTATTCAAGAGGGGTACTGTCCCTTCTTGGATGGCATACAGTGGTTACTTCTTGCTAAGCATCATTGCGGTAATCACCATACCGATAATGTTTCGACAAGTGAAGTGGTACTACGTGATCATAGCCTACGCGCTCGGCCCGGTGCTAGGATTCGCCAATTCCTACGGAGCAGGGCTCACGGACATCAACATGGGGTACAACTACGGCAAGATCGCTCTCTTCGTCTTTGCAGCTTGGGCTGGCAAGGACAATGGCGTCATAGCCGGCCTTGTGGTTGGCACCCTGGTGAAGCAGCTGGTGCTCGTCTCTGCCGATCTGATGCACGATCTCAAGACGGGACATCTCACCTTGACATCGCCGAGGTCCATGCTCGTGGGAGAGCTCATCGGGACAGGCATTGGCTGCTTCATCGCGCCACTGACGTTCATGCTGTTCTACAGGGCGTTTGACATCGGGAACCCCGATGGCTACTGGAAGGCGCCATACGCGCTGATCTACCGCAACATGGCGATCCTCGGGATCGAGGGCATCTCGGCGCTGCCCAAGCACTGCCTCTCGCTCTCCGTCGGGTTCTTCGCGTTCGCCGTGCTCACGAACGTGGCGAGGGACGCCCTGCCGGCGAGGTACAAGAAGCTCGTGCCGCTGCCGACGGCGATGGCCGTGCCGTTCCTCGTAGGGGCGAGCTTCGCCATCGACATGTGCGTCGGGAGCCTGGTGCTGTTTGCTTGGAACAAGATGAACAAGAAGGAGGCTGCCTTCATGGTGCCTGCTGTTGCGTCTGGGCTCATGTGTGGCGATGGCATTTGGACCTTCCCTTCTTCTATCCTTGCTCTCGCTAAGATTAAGCCACCGATCTGCATGAAGTTTACGCCTGGAAGCTAA
  • >LOC_Os02g43410.2
    ATGGAGCACGCCGACGCGGACCGCACGCGGGTGGCGCCCGAGATCGGGAGCCTGCACGACGAGGACGCGGAGGCGGACCCGGCGCGGGCGCGGGAGATGGAGCGGCTGCAGCCGTGGCGGGAGCAGGTGACGGCGCGCGGGGTGGTGGCGGCGGCGCTGATCGGGTTCGTGTTCAGCGTCATCGTGATGAAGATCGCGCTCACCACGGGGCTGGTGCCCACGCTCAACATCTCCGCCGCGCTGCTCGCCTTCCTCGCGCTCCGCGGCTGGACGCGCGCGCTGGAGCGCCTCGGCTTCTCGCCGCGGCCCTTCACGCGGCAGGAGAACACCGTCGTCCAGACCTGCGCCGTCGCCTGCTACACCATAGCCTTCGGCGGTGGGTTCGGATCGACATTGCTGGGCCTGAACAAGAGGACGTACGAGCTGGCCGGGAACTCACCAGGCAATGTGCCAGGGAGCTATAAGGAGCCTGGGATTGGCTGGATGGTAGGGCTCCTCCTGGCTATTAGCTTCGCGGGTAACCTCAGCTTGATTCCCCTAAGAAAGGCTTTGGTCGTAGACTACAAATTAACTTATCCAAGTGGAACTGCAACAGCTGTTCTTATCAACGGGTTCCACACAGCCCAAGGAGATAAGAATGCAAAATTGCAACTCCATGGGTTTCTAAAATATTTTGGGCTTAGCTTATTTTGGAGCTTCTTCCAATGGTTCTACACGGGAGGCAATGCCTGTGGATTTGTTCAGTTCCCTACTTTTGGTCTGAAAGCCTGGAAACAATCATTCTTCTTTGATTTTAGCCTCACATATGTTGGTGCGGGGATGATTTGCTCACACCTTGTGAACCTCTCTACCCTCCTTGGTGCGGTCATTTCATGGGGAATAATGTGGCCACTTATCAGCAAACATAAGGGGGACTGGTACCCTGCAAACATACCTGAAAGCAGCATGACAAGTTTGTATGGTTACAAGTCGTTTTTATGCATTGCTCTGATTATGGGGGATGGCCTGTACCATTTTGTTAAAGTTACCGGTGTCACTGCTAAGAGTTTACATAATAGATTTAACCGAAAAAGTGTTAGCAACACAGCATCAGAGGAGGGTGATATGGTTTCATTAGATGATCTACAACGTGATGAGGTATTCAAGAGGGGTACTGTCCCTTCTTGGATGGCATACAGTGGTTACTTCTTGCTAAGCATCATTGCGGTAATCACCATACCGATAATGTTTCGACAAGTGAAGTGGTACTACGTGATCATAGCCTACGCGCTCGGCCCGGTGCTAGGATTCGCCAATTCCTACGGAGCAGGGCTCACGGACATCAACATGGGGTACAACTACGGCAAGATCGCTCTCTTCGTCTTTGCAGCTTGGGCTGGCAAGGACAATGGCGTCATAGCCGGCCTTGTGGTTGGCACCCTGGTGAAGCAGCTGGTGCTCGTCTCTGCCGATCTGATGCACGATCTCAAGACGGGACATCTCACCTTGACATCGCCGAGGTCCATGCTCGTGGGAGAGCTCATCGGGACAGGCATTGGCTGCTTCATCGCGCCACTGACGTTCATGCTGTTCTACAGGGCGTTTGACATCGGGAACCCCGATGGCTACTGGAAGGCGCCATACGCGCTGATCTACCGCAACATGGCGATCCTCGGGATCGAGGGCATCTCGGCGCTGCCCAAGCACTGCCTCTCGCTCTCCGTCGGGTTCTTCGCGTTCGCCGTGCTCACGAACGTGGCGAGGGACGCCCTGCCGGCGAGGTACAAGAAGCTCGTGCCGCTGCCGACGGCGATGGCCGTGCCGTTCCTCGTAGGGGCGAGCTTCGCCATCGACATGTGCGTCGGGAGCCTGGTGCTGTTTGCTTGGAACAAGATGAACAAGAAGGAGGCTGCCTTCATGGTGCCTGCTGTTGCGTCTGGGCTCATGTGTGGCGATGGCATTTGGACCTTCCCTTCTTCTATCCTTGCTCTCGCTAAGATTAAGCCACCGATCTGCATGAAGTTTACGCCTGGAAGCTAA
Protein Sequence
  • >LOC_Os02g43410.1
    MEHADADRTRVAPEIGSLHDEDAEADPARAREMERLQPWREQVTARGVVAAALIGFVFSVIVMKIALTTGLVPTLNISAALLAFLALRGWTRALERLGFSPRPFTRQENTVVQTCAVACYTIAFGGGFGSTLLGLNKRTYELAGNSPGNVPGSYKEPGIGWMVGLLLAISFAGNLSLIPLRKALVVDYKLTYPSGTATAVLINGFHTAQGDKNAKLQLHGFLKYFGLSLFWSFFQWFYTGGNACGFVQFPTFGLKAWKQSFFFDFSLTYVGAGMICSHLVNLSTLLGAVISWGIMWPLISKHKGDWYPANIPESSMTSLYGYKSFLCIALIMGDGLYHFVKVTGVTAKSLHNRFNRKSVSNTASEEGDMVSLDDLQRDEVFKRGTVPSWMAYSGYFLLSIIAVITIPIMFRQVKWYYVIIAYALGPVLGFANSYGAGLTDINMGYNYGKIALFVFAAWAGKDNGVIAGLVVGTLVKQLVLVSADLMHDLKTGHLTLTSPRSMLVGELIGTGIGCFIAPLTFMLFYRAFDIGNPDGYWKAPYALIYRNMAILGIEGISALPKHCLSLSVGFFAFAVLTNVARDALPARYKKLVPLPTAMAVPFLVGASFAIDMCVGSLVLFAWNKMNKKEAAFMVPAVASGLMCGDGIWTFPSSILALAKIKPPICMKFTPGS*
  • >LOC_Os02g43410.2
    MEHADADRTRVAPEIGSLHDEDAEADPARAREMERLQPWREQVTARGVVAAALIGFVFSVIVMKIALTTGLVPTLNISAALLAFLALRGWTRALERLGFSPRPFTRQENTVVQTCAVACYTIAFGGGFGSTLLGLNKRTYELAGNSPGNVPGSYKEPGIGWMVGLLLAISFAGNLSLIPLRKALVVDYKLTYPSGTATAVLINGFHTAQGDKNAKLQLHGFLKYFGLSLFWSFFQWFYTGGNACGFVQFPTFGLKAWKQSFFFDFSLTYVGAGMICSHLVNLSTLLGAVISWGIMWPLISKHKGDWYPANIPESSMTSLYGYKSFLCIALIMGDGLYHFVKVTGVTAKSLHNRFNRKSVSNTASEEGDMVSLDDLQRDEVFKRGTVPSWMAYSGYFLLSIIAVITIPIMFRQVKWYYVIIAYALGPVLGFANSYGAGLTDINMGYNYGKIALFVFAAWAGKDNGVIAGLVVGTLVKQLVLVSADLMHDLKTGHLTLTSPRSMLVGELIGTGIGCFIAPLTFMLFYRAFDIGNPDGYWKAPYALIYRNMAILGIEGISALPKHCLSLSVGFFAFAVLTNVARDALPARYKKLVPLPTAMAVPFLVGASFAIDMCVGSLVLFAWNKMNKKEAAFMVPAVASGLMCGDGIWTFPSSILALAKIKPPICMKFTPGS*