Information report for OsLMS
Gene Details
|
|
Functional Descriptions
- Mutation in OsLMS, a gene encoding a protein with two double-stranded RNA binding motifs, causes lesion mimic phenotype and early senescence in rice (Oryza sativa L.).
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q0DZ88
- EMBL: AP004768, AP005513, AP008208
- EnsemblPlants: Os02t0639000-01
- Gramene: Os02t0639000-01
- KEGG: dosa:Os02g0639000, osa:4330100
- Orthologous matrix: EMEIYPP
- InterPro: IPR004274, IPR014720, IPR023214
- PANTHER: PTHR23081, PTHR23081:SF0
- SUPFAM: SSF54768, SSF56784
- PROSITE: PS50137, PS50969
- Gene3D: 3.30.160.20, 3.40.50.1000
- OrthoDB: Q0DZ88
Sequences
cDNA Sequence
- >LOC_Os02g42600.1
AATCCGATCCGATCAGACGCCTAGTTTAGGGTTTCAGAGCTTTCTCCCCACCTCTCCCCTCCCCTCCCCCCCCTCTCTCTGTCGTCCTCTTCCTCCCGCTCGCGTCCGCCATTGACGCGGCGCGGCGCACGAGCTCCCCCTCAGATCTGACCAATCCACACCGCGAACCCTCTCACCTGACGCAACCCCGAATCTTGCCTGGAACGGCGAAGAATTCGAACACAAATCTGAAGCACACCGTCGTCACTAAGACCACACACTACATCTGATTTTTTTTTGTTTCTCCACACCCTGATTGTTTCTAGATTTTTTTTTATTCTCGTTTCGGACGCTTCATAAGAACAGATCTGCGAGCGAGTTCGCGGATCTTATCTATCTGTGTGAGAACCAAGACCCTTTTGTTGCCTGTGGACACGATCCGAACGAACTTTGACCTGAGGATTCGTTTGAGATCTGTTTGCTGCTGGTCTCGAGAGAATGATCAGGTCGATGGTATATTTCGGGAACACCTCCATCGGCGAGGTGGAGGTGTGGCCCAGCGGCGACGCGAGCCTGGCAGCGGCAGCGTGGGCTCGAGAGATCCGCGTTGACCGCCTTTCCCCGCCCAGCGAGCGGTGCCAGCCGCTCGCCGTGATGCATACCGTGGCCGTCGGTGCTCGCTGCCTCGTCATGGAGTCCAGGCTGCCCAAGGCAGCGGATGAGCCACCCCAGCCTCTCGTCGCCATGCACGCTGCTTGCCTCAAGGAAAACAAGACTGCAGTTGTTCCACTAGGAGAGGAAGAATTGCATTTAGTGGCAATGACATCCAGGAGAAACCTGACAAATCACGCATGTTTCTGGGGATATAAAGTGCCATTTGGTTTGTACAATTCTTGCTTGACTATGTTAAATCTCCGGTGCCTTGGGATCGTATTTGACCTTGATGAGACACTGATTGTCGCCAATACTACACGGTCTTTTGAGGACAGAATTGACGCGCTTCAGAGAAAGTTGAGCAATGAGACTGATCCACAGCGCATAAACGGTATGATAGCGGAGATTAAGAGGTACCAAGATGATAAGTCTATCCTAAAGCAGTACATTGAAGGTGATCAGGTCTATGATGATGGAAAAATGTATAAAGTGCAACCTGAGTTGGTTCCGCCATTATCCGATAACCATCAACCAATGACACGTCCAGTTATACGATTACAAGAGAAGAATATTATCTTGACGAGAATAAATCCTTTGATAAGGGATACCAGTGTTCTTGTACGTTTAAGGCCAGCATGGGAGGATCTCCGGAGCTACTTGATTGCTAGAGGTCGCAAACGTTTTGAGGTCTATGTGTGTACAATGGCTGAGAGAGACTACGCCTTAGAAATGTGGAGGTTGCTTGATCCAGACTCAAGATTGATTAACTCTGTTCAACTTAATGACAGAATGGTGTGTGTAAAATCTGGTTTAAGAAAGTCCTTGCTGAATGTTTTCCATGATGGATCCTGCCATCCTGGAATGGCCCTAGTAATTGATGACCGACTCAAAGTCTGGGATGAGAAGGATCAATCTAGAGTTCATGTGGTTCCTGCATTCACTCCATATTATGCACCACAAGCAGAGGCAAACTGTTCTATCCCAGTTCTCTGTGTCGCCAGGAATGTTGCATGCAATGTTAGAGGGGGCTTCTTTAAGGACTTTGATGAAGGCCTCTTACCAAGAATTAGCAATGTTTTTTATGAGGATGAAATCAATGAAATCCCATCTGCTCCAGATGTTGGCAATTATTTGATTTCAGAGGATGAGAATGTTGCGGCAGTGAATGGAAACAGGGATCCATTGGCTTTTGATGGTATGGCTGATGCTGAGGTTGAAAGGAGAATGAAGGAAGCATCTGGAAATGCTCAAGCTTTTACTACAACAGCAGCTAACTTTGTGATGCCAGTACTCCCTGGTCAAAATTTCGTTTCATCTTCAGTAGCACCAGTAGCCCCATCCCTTGGCATGGTGCCTTTGAGTAATAATCAGGGTCCACCTCCATTCACTCAACCAGTTGCTCAACTGAGTCTCTCAGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTGAAGTTCCTGAGTCAGAGTTAGATCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCAAGACACCAGAGATCCTACACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCAGTTCAACCTCATGGAAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGGGTTCTGCAGGGTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCCATTCTTTCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTATCCCTCCCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAACCATGCACCGTCAAGATACAGATCCTTCCCTGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGAAACAACCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGCATACTAGAGGAGATTGCTATGAAGTGTGGTTCTAAGGTGGAGTACAGGTCAGCACTATGTGATACTGCGGATTTACAGTTCTCAATCGAGGTTTGGATTGTTGGAGAAAAAGTAGGCGAAGGCATTGGCAGGACAAGGAAAGAAGCACAGTGTCAAGCTGCAGAAATCTCATTAAGAAATTTAGCTAATAAATATCTGTCATCTGATCCAAATAAGATGACTGATATGAAAGAAAATGGTTTTGGTAGCAATACAAACATTTTTGGATACCCTGGAAATAGTAGGGACGATGTGTTACCAATTGCAAGTACTTCAGAAGAAACTCGCTTTGTGAAGATGGGGGAGAACAATTCCAGAAAAGCAGGAGGTTCTATTGCTGCTCTCAAGGAACTTTGCACAGCTGAGGGATATAACTTAGTTTTTCAAGCTCGGACATCTCCTGATAGTTCAGTAGGCAAAGAAGCTTATGCTGAGGTAGAAGTTTGTGGGCAAATTCTAGGCAACGGAGTGGGAATAACATGGGAAGATGCTAAGCTTCAGGCTGCTGATGAAGCTCTTGGAATGTTGAGATCCATGCTTGGTCCACTTGCTCAGAAACGGTCCAGTTCTCCAAGGTCACTGGCACCCAGTTTTGATAAGCGCTTCAAGCCAGATTTTCCACGGGCAGTGCAAAGGGTTCCTTATGGTAGATATTCCCGAATTGAAGGCCATGTTCCTTGACATTTTAACGGATACATTGGTTCTAAACTCTGGATTTTTTAGCTAGATGAGACGTATCAACTTTGCAGAGAATAAAAACCATGACACCCGGTCATCTTGCGCGGCTTCTACTGGAAACATGGATGGTTGTGGATGCACCAAGAAATTGCAAGCAATTGTGGTGGCCATGTCTTCATGCTGATACTTGCTTTGGGTCTGATCTCACGTTAATTGACATGTTTGACTTGAAGTGTGCCCATCCTTGTGGATACCCAGACGTACCGCTTCCGTGGGGGCTTGTGCAGCTTCTGTCCTGCTTGGGGGAACTTCAATCCGTGGCTGCAGAGGCGCTGCGACCGTTTTAACATTTTGTTTGTAGGATAAGTTTGTAGCTTAGGTTTGGAGTAGGTAGCTAATTTTGTTGCGGTGGAAGTAGGTATTAATCCTACATTAAATCCCGTGTTTATTTTTTTAGGTCAATACTGACAAAAGTTCAGTAGCTAGATGTTTATTATTTGTTTCTTTATGTAGTCATTCTTTATTATGTTCTTGTCATTATTTGTAAAGATCTACGGTTTGTTGATTGTGTTGCCGGTGTAACCTCGCATCGCGGGGTGGCCTCTCGAATCTCTCGTATGTTGTCTCCTGCTGAAAAACTGTACACGTCTGCTGTGGTCGTGACTACGAAGTTCTTCCAGATGACTCCCACCTCCTG
CDS Sequence
- >LOC_Os02g42600.1
ATGATCAGGTCGATGGTATATTTCGGGAACACCTCCATCGGCGAGGTGGAGGTGTGGCCCAGCGGCGACGCGAGCCTGGCAGCGGCAGCGTGGGCTCGAGAGATCCGCGTTGACCGCCTTTCCCCGCCCAGCGAGCGGTGCCAGCCGCTCGCCGTGATGCATACCGTGGCCGTCGGTGCTCGCTGCCTCGTCATGGAGTCCAGGCTGCCCAAGGCAGCGGATGAGCCACCCCAGCCTCTCGTCGCCATGCACGCTGCTTGCCTCAAGGAAAACAAGACTGCAGTTGTTCCACTAGGAGAGGAAGAATTGCATTTAGTGGCAATGACATCCAGGAGAAACCTGACAAATCACGCATGTTTCTGGGGATATAAAGTGCCATTTGGTTTGTACAATTCTTGCTTGACTATGTTAAATCTCCGGTGCCTTGGGATCGTATTTGACCTTGATGAGACACTGATTGTCGCCAATACTACACGGTCTTTTGAGGACAGAATTGACGCGCTTCAGAGAAAGTTGAGCAATGAGACTGATCCACAGCGCATAAACGGTATGATAGCGGAGATTAAGAGGTACCAAGATGATAAGTCTATCCTAAAGCAGTACATTGAAGGTGATCAGGTCTATGATGATGGAAAAATGTATAAAGTGCAACCTGAGTTGGTTCCGCCATTATCCGATAACCATCAACCAATGACACGTCCAGTTATACGATTACAAGAGAAGAATATTATCTTGACGAGAATAAATCCTTTGATAAGGGATACCAGTGTTCTTGTACGTTTAAGGCCAGCATGGGAGGATCTCCGGAGCTACTTGATTGCTAGAGGTCGCAAACGTTTTGAGGTCTATGTGTGTACAATGGCTGAGAGAGACTACGCCTTAGAAATGTGGAGGTTGCTTGATCCAGACTCAAGATTGATTAACTCTGTTCAACTTAATGACAGAATGGTGTGTGTAAAATCTGGTTTAAGAAAGTCCTTGCTGAATGTTTTCCATGATGGATCCTGCCATCCTGGAATGGCCCTAGTAATTGATGACCGACTCAAAGTCTGGGATGAGAAGGATCAATCTAGAGTTCATGTGGTTCCTGCATTCACTCCATATTATGCACCACAAGCAGAGGCAAACTGTTCTATCCCAGTTCTCTGTGTCGCCAGGAATGTTGCATGCAATGTTAGAGGGGGCTTCTTTAAGGACTTTGATGAAGGCCTCTTACCAAGAATTAGCAATGTTTTTTATGAGGATGAAATCAATGAAATCCCATCTGCTCCAGATGTTGGCAATTATTTGATTTCAGAGGATGAGAATGTTGCGGCAGTGAATGGAAACAGGGATCCATTGGCTTTTGATGGTATGGCTGATGCTGAGGTTGAAAGGAGAATGAAGGAAGCATCTGGAAATGCTCAAGCTTTTACTACAACAGCAGCTAACTTTGTGATGCCAGTACTCCCTGGTCAAAATTTCGTTTCATCTTCAGTAGCACCAGTAGCCCCATCCCTTGGCATGGTGCCTTTGAGTAATAATCAGGGTCCACCTCCATTCACTCAACCAGTTGCTCAACTGAGTCTCTCAGATCCACTGCAAGGCTCTCCAGCTAGGGAAGAGGGTGAAGTTCCTGAGTCAGAGTTAGATCCTGACACAAGGAGAAGACTTCTTATATTACAACATGGTCAAGACACCAGAGATCCTACACCTCCTCTTCCAGCAGTACCTCCTGTTCAAGTCCCAGTTCCTCCAGTTCAACCTCATGGAAATTGGTTTCCTGTAGAGGATGGCATGAATCCAAATAATCTAAACAGGGGTTCTGCAGGGTTCCCTTTGGAATCTGAAACTATGCACTATGATAAAAAGCAACTACCTCACCCATTCTTTCATGGTGGGGAAAACCCTATATCCTCTGATAGATTTAGTTATCAGAACCAGAGGTATCCCTCCCAGCTACCGCATAGTGAAGATCATCGCGTTCTTCAGAACCATGCACCGTCAAGATACAGATCCTTCCCTGGAGAGGAGCTAGCAACTCGGCATGTTTCTTCAAGTCAGAGAAACAACCAGATAGTACCAGGACAACACTTTGCTCGGCATGCAGGGAGCTCTGCTGGCATACTAGAGGAGATTGCTATGAAGTGTGGTTCTAAGGTGGAGTACAGGTCAGCACTATGTGATACTGCGGATTTACAGTTCTCAATCGAGGTTTGGATTGTTGGAGAAAAAGTAGGCGAAGGCATTGGCAGGACAAGGAAAGAAGCACAGTGTCAAGCTGCAGAAATCTCATTAAGAAATTTAGCTAATAAATATCTGTCATCTGATCCAAATAAGATGACTGATATGAAAGAAAATGGTTTTGGTAGCAATACAAACATTTTTGGATACCCTGGAAATAGTAGGGACGATGTGTTACCAATTGCAAGTACTTCAGAAGAAACTCGCTTTGTGAAGATGGGGGAGAACAATTCCAGAAAAGCAGGAGGTTCTATTGCTGCTCTCAAGGAACTTTGCACAGCTGAGGGATATAACTTAGTTTTTCAAGCTCGGACATCTCCTGATAGTTCAGTAGGCAAAGAAGCTTATGCTGAGGTAGAAGTTTGTGGGCAAATTCTAGGCAACGGAGTGGGAATAACATGGGAAGATGCTAAGCTTCAGGCTGCTGATGAAGCTCTTGGAATGTTGAGATCCATGCTTGGTCCACTTGCTCAGAAACGGTCCAGTTCTCCAAGGTCACTGGCACCCAGTTTTGATAAGCGCTTCAAGCCAGATTTTCCACGGGCAGTGCAAAGGGTTCCTTATGGTAGATATTCCCGAATTGAAGGCCATGTTCCTTGA
Protein Sequence
- >LOC_Os02g42600.1
MIRSMVYFGNTSIGEVEVWPSGDASLAAAAWAREIRVDRLSPPSERCQPLAVMHTVAVGARCLVMESRLPKAADEPPQPLVAMHAACLKENKTAVVPLGEEELHLVAMTSRRNLTNHACFWGYKVPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTTRSFEDRIDALQRKLSNETDPQRINGMIAEIKRYQDDKSILKQYIEGDQVYDDGKMYKVQPELVPPLSDNHQPMTRPVIRLQEKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLDPDSRLINSVQLNDRMVCVKSGLRKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQSRVHVVPAFTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRISNVFYEDEINEIPSAPDVGNYLISEDENVAAVNGNRDPLAFDGMADAEVERRMKEASGNAQAFTTTAANFVMPVLPGQNFVSSSVAPVAPSLGMVPLSNNQGPPPFTQPVAQLSLSDPLQGSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPTPPLPAVPPVQVPVPPVQPHGNWFPVEDGMNPNNLNRGSAGFPLESETMHYDKKQLPHPFFHGGENPISSDRFSYQNQRYPSQLPHSEDHRVLQNHAPSRYRSFPGEELATRHVSSSQRNNQIVPGQHFARHAGSSAGILEEIAMKCGSKVEYRSALCDTADLQFSIEVWIVGEKVGEGIGRTRKEAQCQAAEISLRNLANKYLSSDPNKMTDMKENGFGSNTNIFGYPGNSRDDVLPIASTSEETRFVKMGENNSRKAGGSIAALKELCTAEGYNLVFQARTSPDSSVGKEAYAEVEVCGQILGNGVGITWEDAKLQAADEALGMLRSMLGPLAQKRSSSPRSLAPSFDKRFKPDFPRAVQRVPYGRYSRIEGHVP*