Information report for PAL;OsPAL4
Gene Details
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Functional Descriptions
- OsPAL4 clusters with three additional OsPAL genes that co-localize with QTL for bacterial blight and sheath blight disease resistance on rice chromosome 2.
- The heterozygous OsPAL4 mutant line exhibited increased susceptibility to three distinct rice diseases, bacterial blight, sheath blight, and rice blast.
- Rice phenylalanine ammonia-lyase gene OsPAL4 is associated with broad spectrum disease resistance.
- Overall, these results suggest that OsPAL4 and possibly OsPAL6 are key contributors to resistance governed by QTL and are potential breeding targets for improved broad-spectrum disease resistance in rice.
- OsPAL6 co-localizes with a QTL for rice blast resistance, and is down-regulated in the OsPAL4 mutant line; this may explain enhanced susceptibility to Magnoporthe oryzae.
Literature and News
- OsCERK1 and OsRLCK176 play important roles in peptidoglycan and chitin signaling in rice innate immunity . DOI: 10.1111/tpj.12710 ; PMID: 25335639
- Rice phenylalanine ammonia-lyase gene OsPAL4 is associated with broad spectrum disease resistance . DOI: 10.1007/s11103-014-0275-9 ; PMID: 25515696
- Conserved Imprinted Genes between Intra-Subspecies and Inter-Subspecies Are Involved in Energy Metabolism and Seed Development in Rice . DOI: 10.3390/ijms21249618 ; PMID: 33348666
- Identification of a small set of genes commonly regulated in rice roots in response to beneficial rhizobacteria . DOI: 10.1007/s12298-020-00911-1 ; PMID: 33424163
- A Pathogen-Inducible Rice NAC Transcription Factor ONAC096 Contributes to Immunity Against Magnaprothe oryzae and Xanthomonas oryzae pv. oryzae by Direct Binding to the Promoters of OsRap2.6, OsWRKY62, and OsPAL1 . DOI: 10.3389/fpls.2021.802758 ; PMID: 34956298
Gene Resources
- UniProt: B7EFQ4
- EMBL: AK068993, KF556681
- AlphaFoldDB: B7EFQ4
- EnsemblPlants: Os02t0627100-01
- Gramene: Os02t0627100-01
- KEGG: dosa:Os02g0627100
- Orthologous matrix: VENTRCE
- InterPro: IPR001106, IPR005922, IPR008948
- PANTHER: PTHR10362
- SUPFAM: SSF48557
- PROSITE: PS00488
- Gene3D: 1.10.274.20, 1.10.275.10, 1.20.200.10
- OrthoDB: B7EFQ4
- SWISS-MODEL: B7EFQ4
- Conserved Domain Database: cd00332
Sequences
cDNA Sequence
- >LOC_Os02g41680.1
AAGAAGAGCCGCACCATCCAGTGCAGTAGTACACTAGCTCTTCTTCACAACAGCTAATCGAGTAGCTAGAACCATTATATACTCTTCTCTCGACGCTTTCTGTGCTAGGTTAACCGATCCATCTTCTGGTACTGAAATGGAGTGCGAGAACGGCCGCGTTTCTGCCAATGGCATGAGTGGTCTCTGCGTCGCGGCGCCCCGCGCCGACCCGCTGAACTGGGGGAAGGCCACGGAGGAGATGACGGGGAGCCACCTCGACGAGGTGAAGAGGATGGTGGCGGAGTACCGCCAGCCTCTGGTCAAGATCGAGGGCGCTAGCCTGAGGATCGCGCAGGTCGCCGCGGTGGCCGCGGCCGGCGAGGCCAGGGTGGAGCTCGACGAGTCGGCCCGCGAGCGCGTCAAGGCCAGCAGCGACTGGGTGATGAACAGCATGATGAACGGCACGGACAGCTACGGTGTCACCACCGGTTTCGGCGCCACGTCCCACAGGAGGACCAAGGAGGGTGGTGCTCTGCAAAGAGAGCTCATCAGATTCCTCAATGCCGGCGCGTTCGGCACTGGCACCGACGGTCATGTTTTGCCGGCGGAGGCAACCCGCGCGGCAATGCTCGTCCGCATCAACACACTCCTCCAGGGATACTCCGGCATCCGGTTCGAGATCCTCGAGGCGATCGCCAAGCTGCTCAACGCGAACGTCACACCGTGCCTGCCGCTCCGGGGCACGATCACCGCCTCCGGTGACCTCGTCCCGCTGTCCTACATTGCCGGCCTTGTCACTGGGCGCGAGAACGCCGTGGCGGTTGCACCAGATGGCAGCAAGGTGAACGCCGCTGAGGCGTTCAAGATTGCTGGCATCCAGGGCGGCTTCTTCGAGCTGCAGCCCAAGGAAGGCCTTGCCATGGTCAATGGCACTGCCGTGGGCTCTGGCCTTGCATCGACCGTGCTCTTTGAGGCTAACATTCTTGCCATCCTCGCCGAGGTCCTCTCGGCCGTGTTCTGCGAGGTGATGAACGGCAAGCCGGAGTACACCGACCACCTGACTCACAAGCTCAAGCACCATCCAGGACAGATCGAGGCCGCCGCCATCATGGAGCACATCTTGGAGGGAAGCTCCTACATGAAGCATGCCAAGAAGCTTGGTGAGCTCGACCCACTGATGAAGCCGAAGCAAGACCGGTACGCGCTCCGGACATCCCCACAGTGGCTCGGCCCTCAAATTGAGGTTATCCGCGCCGCCACCAAGTCCATCGAGCGTGAGATCAACTCCGTGAACGACAACCCGCTCATCGACGTCTCCCGCGGCAAGGCGCTGCACGGTGGCAACTTCCAGGGCACGCCCATCGGCGTGTCCATGGACAACACCCGCCTCGCCATCGCTGCCATCGGCAAGCTCATGTTCGCGCAGTTCTCGGAGCTCGTGAACGACTTCTACAACAACGGCCTGCCATCCAACCTGTCTGGCGGTCGCAACCCGAGCTTGGACTACGGGTTCAAGGGCGCCGAGATCGCCATGGCCTCCTACTGCTCCGAGCTGCAGTTCTTGGGCAACCCAGTGACCAACCACGTCCAGAGCGCCGAGCAGCACAACCAGGACGTCAACTCTCTTGGACTCATCTCCTCCAGGAAGACCGACGAGGCAATCGACATCCTGAAGCTCATGTCCTCCACGTTCTTGATCGCCCTCTGCCAGGCCGTCGACCTGCGGCACATCGAGGAGAACGTCAAGAGCGCCGTCAAGAGCTGCGTCATGACGGTGGCCAAGAAGACACTCAGCACCAACTCCACCGGCGATCTCCACGTCGCACGCTTCTGCGAGAAGGACCTGCTCAAGGAGATCGACCGCGAGGCGGTGTTCGCGTACGCGGACGACCCGTGCAGCCACAACTACCCGCTGATGAAGAAGCTGCGCAACGTGCTCGTGGAGCGCGCCCTCGCCAACGGCGCGGCCGAGTTCAACGCCGACACCTCGGTGTTCGCCAAGGTCGCGCAGTTCGAGGAGGAGCTGCGCGCGACTCTGCCAGGTGCGATCGAGGCCGCACGTGCGGCTGTGGAGAACGGCACGGCGGCGATTCCCAGCAGAATCACCGAGTGCAGGTCGTATCCGCTCTACCGGTTCGTGCGCGAGGAGCTCGGAACAAAGTACCTGACCGGCGAGAAGACACGATCGCCTGGCGAGGAGCTGAACAAGGTTCTTGTGGCTATCAACGAAGGCAAGCACATCGACCCGTTGCTCGAGTGCCTCAAGGAGTGGAACGGCGAGCCCCTGCCAATCTGCTGAACTAGTGAACCGATTAGCTGAATAACAGTGGAGTGTGGAGGCGTGCGGTGTTGTTTTTATCTGGTGAATATTTTATTTTTACACTTATCTTTGTGTTACTCAAAAGAATTCTTCGTTGCATAGCGGCAAGCATGCAACAGCAAAACTTGGTACGAGTGGCAGGTTTCAAAAGCAACTAGTGTTGTAACATATAAGTTTTGGATATCAGAGTGTTGCAAATCATTAATTTTCATGGCAGAGTTCTTATTTTCCTTTTAG
CDS Sequence
- >LOC_Os02g41680.1
ATGGAGTGCGAGAACGGCCGCGTTTCTGCCAATGGCATGAGTGGTCTCTGCGTCGCGGCGCCCCGCGCCGACCCGCTGAACTGGGGGAAGGCCACGGAGGAGATGACGGGGAGCCACCTCGACGAGGTGAAGAGGATGGTGGCGGAGTACCGCCAGCCTCTGGTCAAGATCGAGGGCGCTAGCCTGAGGATCGCGCAGGTCGCCGCGGTGGCCGCGGCCGGCGAGGCCAGGGTGGAGCTCGACGAGTCGGCCCGCGAGCGCGTCAAGGCCAGCAGCGACTGGGTGATGAACAGCATGATGAACGGCACGGACAGCTACGGTGTCACCACCGGTTTCGGCGCCACGTCCCACAGGAGGACCAAGGAGGGTGGTGCTCTGCAAAGAGAGCTCATCAGATTCCTCAATGCCGGCGCGTTCGGCACTGGCACCGACGGTCATGTTTTGCCGGCGGAGGCAACCCGCGCGGCAATGCTCGTCCGCATCAACACACTCCTCCAGGGATACTCCGGCATCCGGTTCGAGATCCTCGAGGCGATCGCCAAGCTGCTCAACGCGAACGTCACACCGTGCCTGCCGCTCCGGGGCACGATCACCGCCTCCGGTGACCTCGTCCCGCTGTCCTACATTGCCGGCCTTGTCACTGGGCGCGAGAACGCCGTGGCGGTTGCACCAGATGGCAGCAAGGTGAACGCCGCTGAGGCGTTCAAGATTGCTGGCATCCAGGGCGGCTTCTTCGAGCTGCAGCCCAAGGAAGGCCTTGCCATGGTCAATGGCACTGCCGTGGGCTCTGGCCTTGCATCGACCGTGCTCTTTGAGGCTAACATTCTTGCCATCCTCGCCGAGGTCCTCTCGGCCGTGTTCTGCGAGGTGATGAACGGCAAGCCGGAGTACACCGACCACCTGACTCACAAGCTCAAGCACCATCCAGGACAGATCGAGGCCGCCGCCATCATGGAGCACATCTTGGAGGGAAGCTCCTACATGAAGCATGCCAAGAAGCTTGGTGAGCTCGACCCACTGATGAAGCCGAAGCAAGACCGGTACGCGCTCCGGACATCCCCACAGTGGCTCGGCCCTCAAATTGAGGTTATCCGCGCCGCCACCAAGTCCATCGAGCGTGAGATCAACTCCGTGAACGACAACCCGCTCATCGACGTCTCCCGCGGCAAGGCGCTGCACGGTGGCAACTTCCAGGGCACGCCCATCGGCGTGTCCATGGACAACACCCGCCTCGCCATCGCTGCCATCGGCAAGCTCATGTTCGCGCAGTTCTCGGAGCTCGTGAACGACTTCTACAACAACGGCCTGCCATCCAACCTGTCTGGCGGTCGCAACCCGAGCTTGGACTACGGGTTCAAGGGCGCCGAGATCGCCATGGCCTCCTACTGCTCCGAGCTGCAGTTCTTGGGCAACCCAGTGACCAACCACGTCCAGAGCGCCGAGCAGCACAACCAGGACGTCAACTCTCTTGGACTCATCTCCTCCAGGAAGACCGACGAGGCAATCGACATCCTGAAGCTCATGTCCTCCACGTTCTTGATCGCCCTCTGCCAGGCCGTCGACCTGCGGCACATCGAGGAGAACGTCAAGAGCGCCGTCAAGAGCTGCGTCATGACGGTGGCCAAGAAGACACTCAGCACCAACTCCACCGGCGATCTCCACGTCGCACGCTTCTGCGAGAAGGACCTGCTCAAGGAGATCGACCGCGAGGCGGTGTTCGCGTACGCGGACGACCCGTGCAGCCACAACTACCCGCTGATGAAGAAGCTGCGCAACGTGCTCGTGGAGCGCGCCCTCGCCAACGGCGCGGCCGAGTTCAACGCCGACACCTCGGTGTTCGCCAAGGTCGCGCAGTTCGAGGAGGAGCTGCGCGCGACTCTGCCAGGTGCGATCGAGGCCGCACGTGCGGCTGTGGAGAACGGCACGGCGGCGATTCCCAGCAGAATCACCGAGTGCAGGTCGTATCCGCTCTACCGGTTCGTGCGCGAGGAGCTCGGAACAAAGTACCTGACCGGCGAGAAGACACGATCGCCTGGCGAGGAGCTGAACAAGGTTCTTGTGGCTATCAACGAAGGCAAGCACATCGACCCGTTGCTCGAGTGCCTCAAGGAGTGGAACGGCGAGCCCCTGCCAATCTGCTGA
Protein Sequence
- >LOC_Os02g41680.1
MECENGRVSANGMSGLCVAAPRADPLNWGKATEEMTGSHLDEVKRMVAEYRQPLVKIEGASLRIAQVAAVAAAGEARVELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEILEAIAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRENAVAVAPDGSKVNAAEAFKIAGIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAILAEVLSAVFCEVMNGKPEYTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKHAKKLGELDPLMKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTDEAIDILKLMSSTFLIALCQAVDLRHIEENVKSAVKSCVMTVAKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDPCSHNYPLMKKLRNVLVERALANGAAEFNADTSVFAKVAQFEEELRATLPGAIEAARAAVENGTAAIPSRITECRSYPLYRFVREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEPLPIC*