Gene Details:

Functional Descriptions:

  • Northern blot analysis showed a distinct expression pattern for the three genes; more constitutive expression in shoots and roots for OsAMT1;1, root-specific and ammonium-inducible expression for OsAMT1;2, and root-specific and nitrogen-derepressible expression for OsAMT1;3.
  • The three members of the rice OsAMT1 gene family of ammonium transporters show distinct expression patterns; constitutive and ammonium-promoted expression in shoots and roots for OsAMT1;1; root-specific and ammonium-inducible expression for OsAMT1;2; root-specific and nitrogen-repressible expression for OsAMT1;3 [Sonoda et al.
  • Ammonium application to roots following a period of nitrogen starvation induced accumulation of OsAMT1;1 and OsAMT1;2 mRNA, but a decrease of OsAMT1;3 mRNA levels.
  • The expression patterns of the three genes showed good correlation (positive in OsAMT1;1 and OsAMT1;2, negative in OsAMT1;3) with the root tissue contents of glutamine but not of ammonium.
  • In this report, we demonstrate that the rice root expressed OsAMT1;3 (Oryza sativa ammonium transporter 1;3) functions as a typical high-affinity NH4(+) transporter and is weakly permeable to MeA(+) using growth assays in NH4(+) uptake defective yeast cells and electrophysiological measurements in Xenopus oocytes.
  • Spatial expression analysis showed that the upregulated expression of OsAMT1;1 and OsAMT1;2 and downregulated expression of OsAMT1;3 by ammonium were higher in the root mature region than in the root tips.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os02g40710.1
    CAAAACCTCCATTAGTTCCTAAACCCTAGCAAGAAGCAGCACAAAACCTTGCCACACTTGGCTAGTGAGACACACCATGGCGACGTGCTTGGACAGCCTCGGGCCGCTGCTCGGCGGCGCGGCGAACTCCACCGACGCGGCCAACTACATCTGCAACAGGTTCACGGACACCTCCTCCGCGGTGGACGCGACGTACCTGCTCTTCTCGGCCTACCTCGTGTTCGCCATGCAGCTCGGGTTCGCCATGCTCTGCGCGGGCTCCGTCCGCGCCAAGAACTCCATGAACATCATGCTCACCAACGTGCTCGACGCCGCCGCCGGCGCGCTCTTCTACTACCTCTTCGGCTTCGCCTTCGCGTTCGGGACGCCGTCCAAGGGCTTCATCGGGAAGCAGTTCTTCGGGCTGAAGCACATGCCGCAGACAGGGTACGACTACGACTTCTTCCTCTTCCAGTGGGCCTTCGCCATCGCCGCCGCCGGCATCACGTCCGGTTCCATCGCCGAGCGGACGCGCTTCAGCGCGTATCTCATCTACTCCGCCTTCCTCACCGGGTTCGTGTACCCGGTGGTGTCGCACTGGTTCTGGTCCACCGACGGGTGGGCTTCGGCCGGCCGGTTGACGGGTCCGTTGCTGTTCAAGTCGGGCGTCATCGACTTCGCCGGCTCCGGCGTCGTCCATCTGGTCGGTGGCATTGCTGGCCTGTGGGGTGCCTTCATCGAGGGCCCTCGCATCGGGCGGTTCGACGCCGCCGGCCGCACGGTGGCGATGAAAGGGCACAGCGCCTCACTGGTCGTGCTCGGCACCTTCCTGCTGTGGTTCGGGTGGTTCGGCTTCAACCCGGGGTCCTTCACCACCATCTCCAAGATCTACGGCGAGTCGGGCACGATCGACGGGCAGTGGTCGGCGGTGGGCCGCACCGCCGTGACGACGTCGCTGGCGGGGAGCGTCGCCGCGCTGACGACGCTCTACGGCAAGAGATGGCTGACGGGGCACTGGAACGTGACCGACGTCTGCAACGGTCTCCTCGGCGGCTTCGCCGCGATCACCGCGGGCTGCTCCGTGGTCGACCCGTGGGCGTCGGTGATCTGCGGGTTCGTGTCGGCGTGGGTCCTCATCGGCTGCAACAAGCTGTCGCTGATTCTCAAGTTCGACGACCCGCTGGAGGCGACGCAGCTGCACGCCGGGTGCGGCGCGTGGGGGATCATCTTCACCGCGCTGTTCGCGCGCAGGGAGTACGTCGAGCTGATCTACGGGGTGCCGGGGAGGCCGTACGGGCTGTTCATGGGCGGCGGCGGGAGGCTTCTCGCGGCGCACATCGTGCAGATCCTGGTGATCGTCGGGTGGGTCAGCGCCACCATGGGGACGCTCTTCTACGTGCTGCACAGGTTCGGGCTGCTCCGCGTCTCGCCCGCGACAGAGATGGAAGGCATGGACCCGACGTGCCACGGCGGGTTCGGGTACGTGGACGAGGACGAAGGCGAGCGCCGCGTCAGGGCCAAGTCGGCGGCGGAGACGGCTCGCGTGGAGCCCAGAAAGTCGCCGGAGCAAGCCGCGGCGGGCCAGTTTGTGTAG
CDS Sequence
  • >LOC_Os02g40710.1
    ATGGCGACGTGCTTGGACAGCCTCGGGCCGCTGCTCGGCGGCGCGGCGAACTCCACCGACGCGGCCAACTACATCTGCAACAGGTTCACGGACACCTCCTCCGCGGTGGACGCGACGTACCTGCTCTTCTCGGCCTACCTCGTGTTCGCCATGCAGCTCGGGTTCGCCATGCTCTGCGCGGGCTCCGTCCGCGCCAAGAACTCCATGAACATCATGCTCACCAACGTGCTCGACGCCGCCGCCGGCGCGCTCTTCTACTACCTCTTCGGCTTCGCCTTCGCGTTCGGGACGCCGTCCAAGGGCTTCATCGGGAAGCAGTTCTTCGGGCTGAAGCACATGCCGCAGACAGGGTACGACTACGACTTCTTCCTCTTCCAGTGGGCCTTCGCCATCGCCGCCGCCGGCATCACGTCCGGTTCCATCGCCGAGCGGACGCGCTTCAGCGCGTATCTCATCTACTCCGCCTTCCTCACCGGGTTCGTGTACCCGGTGGTGTCGCACTGGTTCTGGTCCACCGACGGGTGGGCTTCGGCCGGCCGGTTGACGGGTCCGTTGCTGTTCAAGTCGGGCGTCATCGACTTCGCCGGCTCCGGCGTCGTCCATCTGGTCGGTGGCATTGCTGGCCTGTGGGGTGCCTTCATCGAGGGCCCTCGCATCGGGCGGTTCGACGCCGCCGGCCGCACGGTGGCGATGAAAGGGCACAGCGCCTCACTGGTCGTGCTCGGCACCTTCCTGCTGTGGTTCGGGTGGTTCGGCTTCAACCCGGGGTCCTTCACCACCATCTCCAAGATCTACGGCGAGTCGGGCACGATCGACGGGCAGTGGTCGGCGGTGGGCCGCACCGCCGTGACGACGTCGCTGGCGGGGAGCGTCGCCGCGCTGACGACGCTCTACGGCAAGAGATGGCTGACGGGGCACTGGAACGTGACCGACGTCTGCAACGGTCTCCTCGGCGGCTTCGCCGCGATCACCGCGGGCTGCTCCGTGGTCGACCCGTGGGCGTCGGTGATCTGCGGGTTCGTGTCGGCGTGGGTCCTCATCGGCTGCAACAAGCTGTCGCTGATTCTCAAGTTCGACGACCCGCTGGAGGCGACGCAGCTGCACGCCGGGTGCGGCGCGTGGGGGATCATCTTCACCGCGCTGTTCGCGCGCAGGGAGTACGTCGAGCTGATCTACGGGGTGCCGGGGAGGCCGTACGGGCTGTTCATGGGCGGCGGCGGGAGGCTTCTCGCGGCGCACATCGTGCAGATCCTGGTGATCGTCGGGTGGGTCAGCGCCACCATGGGGACGCTCTTCTACGTGCTGCACAGGTTCGGGCTGCTCCGCGTCTCGCCCGCGACAGAGATGGAAGGCATGGACCCGACGTGCCACGGCGGGTTCGGGTACGTGGACGAGGACGAAGGCGAGCGCCGCGTCAGGGCCAAGTCGGCGGCGGAGACGGCTCGCGTGGAGCCCAGAAAGTCGCCGGAGCAAGCCGCGGCGGGCCAGTTTGTGTAG
Protein Sequence
  • >LOC_Os02g40710.1
    MATCLDSLGPLLGGAANSTDAANYICNRFTDTSSAVDATYLLFSAYLVFAMQLGFAMLCAGSVRAKNSMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSKGFIGKQFFGLKHMPQTGYDYDFFLFQWAFAIAAAGITSGSIAERTRFSAYLIYSAFLTGFVYPVVSHWFWSTDGWASAGRLTGPLLFKSGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFDAAGRTVAMKGHSASLVVLGTFLLWFGWFGFNPGSFTTISKIYGESGTIDGQWSAVGRTAVTTSLAGSVAALTTLYGKRWLTGHWNVTDVCNGLLGGFAAITAGCSVVDPWASVICGFVSAWVLIGCNKLSLILKFDDPLEATQLHAGCGAWGIIFTALFARREYVELIYGVPGRPYGLFMGGGGRLLAAHIVQILVIVGWVSATMGTLFYVLHRFGLLRVSPATEMEGMDPTCHGGFGYVDEDEGERRVRAKSAAETARVEPRKSPEQAAAGQFV*