Information report for OsPRR1
Gene Details
|
|
Functional Descriptions
- Flowering genes downstream of OsPRR1 such as OsGI and Hd1 were down regulated in the A654 mutant.
- In addition, OsPIL13 and OsPIL15 colocalize with OsPRR1, an ortholog of the Arabidopsis APRR1 gene that controls photoperiodic flowering response through clock function.
- Together, these results suggest that overexpression of OsLF might repress expression of OsGI and Hd1 by competing with OsPRR1 in interacting with OsPIL13 and OsPIL15 and thus induce late flowering.
Functional Keywords
Literature and News
- An atypical HLH protein OsLF in rice regulates flowering time and interacts with OsPIL13 and OsPIL15 . DOI: 10.1016/j.nbt.2011.04.006 ; PMID: 21549224
- Characterization of a set of phytochrome-interacting factor-like bHLH proteins in Oryza sativa . DOI: 10.1271/bbb.60643 ; PMID: 17485859
- OsELF3-1, an ortholog of Arabidopsis early flowering 3, regulates rice circadian rhythm and photoperiodic flowering . DOI: 10.1371/journal.pone.0043705 ; PMID: 22912900
- The role of casein kinase II in flowering time regulation has diversified during evolution . DOI: 10.1104/pp.109.148908 ; PMID: 20007447
- Nitrogen Mediates Flowering Time and Nitrogen Use Efficiency via Floral Regulators in Rice . DOI: 10.1016/j.cub.2020.10.095 ; PMID: 33278354
- Clock component OsPRR73 positively regulates rice salt tolerance by modulating OsHKT2;1-mediated sodium homeostasis . DOI: 10.15252/embj.2020105086 ; PMID: 33347628
Gene Resources
- UniProt: Q689G9
- EMBL: AB189038, AP003980, AP004083
- AlphaFoldDB: Q689G9
- EnsemblPlants: Os02t0618200-01
- Gramene: Os02t0618200-01
- KEGG: dosa:Os02g0618200
- Orthologous matrix: NQHEYES
- InterPro: IPR001789, IPR010402, IPR011006
- PANTHER: PTHR43874, PTHR43874:SF1
- SUPFAM: SSF52172
- PROSITE: PS50110, PS51017
- Gene3D: 3.40.50.2300
- OrthoDB: Q689G9
- SWISS-MODEL: Q689G9
- Conserved Domain Database: cd17582
- eggNOG: KOG1601
Sequences
cDNA Sequence
- >LOC_Os02g40510.1
ACCCACGGGGCCGCGGCTCGCGGCTCGTCCCGTCCCGTCCCGTGACGAATCCATTGACACCGGCACACGCACACGCACACCCGCACCGCGCGACGCGAGTACGCGACACAAACCGCTCGCGACGAGCCGTTTCGTTTATTTTTACACCGCCCCGGCGCGGCGTGACGAGGCCTTTTCTTCTTTCTTTCATCTCTCGCCGAGCCGAGCCGAGCCGAGCCGCGTGCCCCACCGAGAGAGGAAAGCAAAAGGTAGGGGGAGGAAAATATCCTGTGCCAGTAGAGCGGACACCAACGCCGCCACCACCACCGCCGCCGCCTCCTGAATAGATTAGGCGCGGATAATGGTGCGGGCCGGACCGCAACGCGCGGCGGAGGAGGACGCCGCCGGCGTCGGCGGCGGGTGGCGGCGGTAGCACACTGCTTAGCCTCTGGGGGCGATACTACTGGCGACGGCACGGGATATGGAGGAGGAGGCGCCGCCCGCAGATCCAACAACCGCTTCGTCCTCCTGCGTCGTCTAGTCTAGGCGCCGGCAGCTGCTGCTGGCTGCTGTGCTGTTCGTGCTGATTCGGACGCGTCGGCAGCTGGTGACAAGTGGCTAGGGGGGGAATCCGTGCGGGTCGGGGTATGGTGGGCGCCGGCGAGGGGGATCGCGTTGGCGGCGGGGCGGCGGTAGGGGGAGGGCAGCAGTTCGTGGACCGGAGCAAGGTGAGGATTCTGCTCTGCGACAGCGACCCAAGTAGCTCACGGGAGGTGCTCCGCCTCCTCTGCAACTGCTCATACCAAGTGACTTGCGCCAAGTCTCCGAGGCAGGTGATCAACGTACTCAACTGCGAGGCGGGGGAGATCGACATCATCTTGGCCGAGGTCGATCTGCCCGTCTCCAAGTGCTTCAAGATGCTCAAATACATCGCCAGGAACAAGGAATTGCGCCACATCCCCATCATAATGATGTCCAACAGAGACGAGGTCTCTGTTGTTGTCAAGTGCTTGCGTCTCGGGGCAGCCGAGTACCTGGTCAAGCCACTGCGCATGAACGAGCTGCTGAACCTCTGGACCCATGTGTGGCGGCGAAGGCGGATGCTTGGTTTGTCGGAGAAAAACTTCTTCAATGACAATTTCGAGTTGGCGTTATCGGAACCTAGTGACGCCAATACCAACAGCACCACTCTTCTCTCGGATGACACAGATGATAAGCCAAAAGAAAACATTAATCAAGAAACAAGCACCTCGAATCAACATGAATATGAGTCTAATCCTTCTGATGCTGAGCCTAAACAAAAAGGCACACCAGAGGGTTTACTAGTCTCTACTGAAGGCGGCGACCAAGCTTCATCTCCCGGAGTAATGTTTTCACGTCCAATAAAGACTAACTTGAGGGTTGCTGAGTCTTCTGCTTTTCTAGCTTATGTTAAGTCAAGCACCCCAACTACCAGCTCATTTGACAGCGAACTACAAAAAGGTGGAAATCGGTTAGACTCTTCGGATCACAGGGGTAATTTCTCTAGTACAACTGACAGAAGTGACACTGGCACTGATGTAAATATTCGGGATAAAGAAGCCTTTGAGATGCCAGTGCAATACCCTGTGGTATGCTTTTCTTCCTCTAACTTGCATCTGGAGCGAAGCAATGAAGGCCAAAATGATGCTTCAGGAACTCCTCCTGTATATCATTTTCCCTTTTATTACCCAGGGATGATGGACCACGGTATGACACATCCTCCGGTGCAAAATTTCCAAGGGAACATAAACAACGCTCAAGTGCATACACCACAAACGTTGCTCCCTCAGTATAATGTTTATCCCCAATGTCATGGTGTATCTATGATGCCACCATTTCAGTATAATCCTGCTGGTATGAGCATTCAATCAAATCAACTGCCAACACAAAATATGTGGCCACAGGCATCAAGCACACCAATGCCCGAGGAAACATGTAGTCGGTCTGAACGGAGAGCTGCAGCACTTGCCAAATTCAGGCTGAAAAGGAAGGAACGTTGTTTTGACAAGAAGGTGAGGTACGTGAATAGGAAGAAACTTGCTGAAACAAGGCCGAGGGTGCGAGGGCAATTTGTTAGACAGGCAAACTATACAGATATAACCAGCACTGGAGATGATATCTCAGAAGATGAAGATGATGATCCATCCTCCAGGGAGGTAGAGATGGTTTCTTCTCCAGAGTAGTTTGAAAGGTTTTCCTATATGTAAAATAGAGTGCAGATGATTACTGCTCACTTTGCAACTCATTAGATGTAGGCAATACATTTCTTCTGCTTTTAACTAGGCAATACATCCACTCGCTCACACACAATACATCCTTTTTGTCCCCCAAGGAACTTGTGGCATATCCATCACTGTTACTATGGACGTTTTGGAGAAAATCATCTTTGAAGGTGAGATGTAATTATGCTAGTTAGTGATGCATAGGCCAGTCTAGATCGTAACCATCTTGTTTCAGAATCTTATAGGACTTTACTCAGTGCTCCTTCTTAGACACGTTTTTACTTCCATTTTCTCGATGTTGGAGGCTGTCCATGTTTGAACATCGTGTTCTACCACAGAAGTCGATTTTGGAGGTTGTACATGTTTGAACTTTGTGTTCTATCACAGAAGTTTGCGAGCACC
CDS Sequence
- >LOC_Os02g40510.1
ATGGTGGGCGCCGGCGAGGGGGATCGCGTTGGCGGCGGGGCGGCGGTAGGGGGAGGGCAGCAGTTCGTGGACCGGAGCAAGGTGAGGATTCTGCTCTGCGACAGCGACCCAAGTAGCTCACGGGAGGTGCTCCGCCTCCTCTGCAACTGCTCATACCAAGTGACTTGCGCCAAGTCTCCGAGGCAGGTGATCAACGTACTCAACTGCGAGGCGGGGGAGATCGACATCATCTTGGCCGAGGTCGATCTGCCCGTCTCCAAGTGCTTCAAGATGCTCAAATACATCGCCAGGAACAAGGAATTGCGCCACATCCCCATCATAATGATGTCCAACAGAGACGAGGTCTCTGTTGTTGTCAAGTGCTTGCGTCTCGGGGCAGCCGAGTACCTGGTCAAGCCACTGCGCATGAACGAGCTGCTGAACCTCTGGACCCATGTGTGGCGGCGAAGGCGGATGCTTGGTTTGTCGGAGAAAAACTTCTTCAATGACAATTTCGAGTTGGCGTTATCGGAACCTAGTGACGCCAATACCAACAGCACCACTCTTCTCTCGGATGACACAGATGATAAGCCAAAAGAAAACATTAATCAAGAAACAAGCACCTCGAATCAACATGAATATGAGTCTAATCCTTCTGATGCTGAGCCTAAACAAAAAGGCACACCAGAGGGTTTACTAGTCTCTACTGAAGGCGGCGACCAAGCTTCATCTCCCGGAGTAATGTTTTCACGTCCAATAAAGACTAACTTGAGGGTTGCTGAGTCTTCTGCTTTTCTAGCTTATGTTAAGTCAAGCACCCCAACTACCAGCTCATTTGACAGCGAACTACAAAAAGGTGGAAATCGGTTAGACTCTTCGGATCACAGGGGTAATTTCTCTAGTACAACTGACAGAAGTGACACTGGCACTGATGTAAATATTCGGGATAAAGAAGCCTTTGAGATGCCAGTGCAATACCCTGTGGTATGCTTTTCTTCCTCTAACTTGCATCTGGAGCGAAGCAATGAAGGCCAAAATGATGCTTCAGGAACTCCTCCTGTATATCATTTTCCCTTTTATTACCCAGGGATGATGGACCACGGTATGACACATCCTCCGGTGCAAAATTTCCAAGGGAACATAAACAACGCTCAAGTGCATACACCACAAACGTTGCTCCCTCAGTATAATGTTTATCCCCAATGTCATGGTGTATCTATGATGCCACCATTTCAGTATAATCCTGCTGGTATGAGCATTCAATCAAATCAACTGCCAACACAAAATATGTGGCCACAGGCATCAAGCACACCAATGCCCGAGGAAACATGTAGTCGGTCTGAACGGAGAGCTGCAGCACTTGCCAAATTCAGGCTGAAAAGGAAGGAACGTTGTTTTGACAAGAAGGTGAGGTACGTGAATAGGAAGAAACTTGCTGAAACAAGGCCGAGGGTGCGAGGGCAATTTGTTAGACAGGCAAACTATACAGATATAACCAGCACTGGAGATGATATCTCAGAAGATGAAGATGATGATCCATCCTCCAGGGAGGTAGAGATGGTTTCTTCTCCAGAGTAG
Protein Sequence
- >LOC_Os02g40510.1
MVGAGEGDRVGGGAAVGGGQQFVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETSTSNQHEYESNPSDAEPKQKGTPEGLLVSTEGGDQASSPGVMFSRPIKTNLRVAESSAFLAYVKSSTPTTSSFDSELQKGGNRLDSSDHRGNFSSTTDRSDTGTDVNIRDKEAFEMPVQYPVVCFSSSNLHLERSNEGQNDASGTPPVYHFPFYYPGMMDHGMTHPPVQNFQGNINNAQVHTPQTLLPQYNVYPQCHGVSMMPPFQYNPAGMSIQSNQLPTQNMWPQASSTPMPEETCSRSERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQANYTDITSTGDDISEDEDDDPSSREVEMVSSPE*