Information report for CPT1
Gene Details
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Functional Descriptions
- However, no asymmetry was induced in CPT1 coleoptiles, indicating that lateral translocation of auxin occurs downstream of CPT1.
- It is concluded that the CPT1-dependent major phototropism of coleoptiles is achieved by lateral auxin translocation and subsequent growth redistribution.
- In an extended study with the CPT1 mutant, it was found that phototropic differential growth is accompanied by a CPT1-independent inhibition of net growth.
- This response, induced only transiently, was thought to be caused by the CPT1-independent growth inhibition.
Literature and News
- Enhanced tolerance to chilling stress in OsMYB3R-2 transgenic rice is mediated by alteration in cell cycle and ectopic expression of stress genes . DOI: 10.1104/pp.108.133454 ; PMID: 19279197
- The Rice COLEOPTILE PHOTOTROPISM1 gene encoding an ortholog of Arabidopsis NPH3 is required for phototropism of coleoptiles and lateral translocation of auxin . DOI: 10.1105/tpc.104.028357 ; PMID: 15598797
Gene Resources
- UniProt: Q5KS50
- EMBL: AB186127, AP006068, AP006069
- AlphaFoldDB: Q5KS50
- EnsemblPlants: Os02t0568200-01
- Gramene: Os02t0568200-01
- KEGG: dosa:Os02g0568200
- Orthologous matrix: EQRRWRN
Sequences
cDNA Sequence
- >LOC_Os02g35970.1
GTGCTATATCTTGCAGTGCATAGCCAGTACTGTCACTCAGCCTGCAGTTTATTGTATAACTGTGCAGTTCCGAAACAAACAAGCCAACAGCCCATGTGGTCGTCTCCTTCCCATAACCTCATCGATCACAAGGACCAATGGATATTCCCCCCTTTCATATCATTTATCATATGCCCTTCAATTCCCGAGCTCTCTCACTAACCAGCTACTACTAGTTTCCCACCAATCAGTGCTCACTGCTCACCTCAGTCAGTCAGTAGTTCAGTACAGGCAGCAGCATCAGCAGCAGCTTCTTCTTCTTCTTCGATTGGGTTCTTGATCGTCGTCGTCGTCGATCTGTGCCTGAGGAGAAGGACGAGAAGTACGTGGAAATTAAGTGAAGGTCTCAGAGACGGCGAGAAGTATGTGGGAGTCGGAGAGCGAGAGCCACGGCGGCGAGCGGGGGCTCGTCCCCGTCGGCGGCGGCGGCGGCTCAGGCCGGCACGAGGCGGCGCTCAAGAACGACGGCTTCGTCCGCAGAGACCGGTCTTGGTATGTCAACAGTGACATCCCCAGCGATCTGCTCGTCAAAGTGGGAGACGTGAACTTCTACCTTCACAAGTATCCGATGATCTCCCGGAGCGGGCGGATGAGCCGCGCCGTGTACGAGTCGTCGGCGGCAGATGAGGCGGAGGCGGACGCGGCGGCGGCGGTGGCGGTGGTGGAGATGGGCGACCTGCCGGGTGGCGCGGGGTCGTTCGAGCTGGCGGCGCGGTTCAGCTACGGGATGGCGGTGGACCTGACGGCGGCGAACATCTCCGGGCTTCGCTGCGCCGCCGAGTACCTGGAGATGACGGAGGAGATGGAGGAAGGGAACCTCATCTTCAAGACGGAGGCGTTCCTCAGCTACGTGGTGCTGTCGTCGTGGCGCGACTCCATCGCCGTGCTCAAGAGCTGCGAGGCGCTCTCGCCGTGGGCGGAGAACCTGCAGATCGTGCGGCGGTGCAGCGAGTCCATCGCCTGGAAGGCGTGCGCCAACCCGCGCGGCGTGCGCTGGGCGTACACCGGCGCCGGCGCCGGCAGCGGAGGAGCGCGCGGGGGCCCGGCGGCGATCAGGGGAGGTGGCGGCTCTGGCGGCACGGCGAGCCCGCGGTGGAACGTCGGTGGCGGCGGAGGGGGGGAGTCGAAGGAGTCGAGCCCGAGCAGGCAGGCGGTGCCGCCGGCGGACTGGTGGTTCGAGGACGTGTCCGTGCTCAGGATCGACCACTTCGTGCGCGTCGTCACCGCCATCAAGGTCAAAGGCATGCGGTTCGACCTGATCGGCGCGGCGATCACCCACTACGCGTCGAAATGGCTCCCCGGCCTCACCAAGGACGCCCCGCTCGGCGCCACCCACGACGAGCCGTGGGCGCAGGCCTCCGCCGCCGGCGTCGGCGGCGGCGGCCTCCACATGATGATCATCTCCGGCGCCGGCGGCGGCAAGGACGACGTCCTCGCCGCCTGCAGCGCGCCGTCGCGCGAGCAGCGCATGGTGGTGGAGAGCATCATCAGCATCACCCCGCCGCAGCGGGACAGCGTCTCCTGCGGCTTCCTCCTCCGCCTCCTCCGCCTCGCCATCATGCTCAGGGCCGCCCCGGCGCTGGTCACCGAGCTCGAGAAGCGCGTCGGGATGCAGCTCGAGCAGGCGGCGCTCGCCGACCTCCTCATCCCCTCCTACGGCGGCCGCGCCGCCGACACCGCCTACGACGTCGACCTCGTGCAGCGCCTCGTCGAGCACTTCCTGGTTCAGGAGCAGACGGAGATGGCGGTGGCGTCCAGCCCCGGCCGCGGCGACCCTCCGCCGCCGCCGCAGCCGGAGTACTACAGCGGGAGGATGCCGCCGTCGTCCGCGGCCGCGGCGTCGGCGTCGGCGTCGACGGGCGGGCTGAACGCCAAGGCGCGCGTCGCCCGGCTGCTCGACAGCTACCTCTCCGAGGTCTCCCGCGACCGCAACCTCTCCCTCACCAAGTTCCAGGTCCTCGCCGAGTCGCTGCCGGAGTCGGCGCGCGCCTGCGACGACGGCCTGTACCGCGCCGTCGACTCCTACCTCAAGGCGCACCCGACGCTGACGGAGCACGAGAGGAAGAGGCTGTGCAGGGTGATGGACTGCCAGAAGCTGTCGTTCGACGCGTGCATGCACGCGGCGCAGAACGAGAGGCTGCCGCTGCGGGTGGTGGTGCAGGTGCTCTTCACCGAGCAGGTCAAGATCAGCAACGCGCTGGCGAGCTCCTCCGCGGCGCTCAGGTCGTCGTCTTCGGCGCCGGGGGCGGACGCCGCGCCGGCGATGCCGACGACGCGGCGGCAGCTGCTGGACGGGACGCCGCAGTCGTTCCAGGAGGGGTGGGCGGCGGCGAAGAAGGACATCAACACGCTCAAGTTCGAGCTGGAGAGCATGAAGGCCAAGTACCTGGAGCTCCAGCACGAGATGGACGCGCTCCAGAAACAGGTGGACGGCCGCGGCGGCGGCGCGCCGTCGCCGGCGGCCGCCAAGATCGGCAAGCAGCAGCAGCAGGGCACGTCGGCGTCGGCGTGGAGCAGCGGGTGGAAGAAGCTGGGCAGGCTGGCCAAGATGTCCGGCGCCGACGCGGCGGCCGGTGGTGGCGTGGCGCCGCCCGGCGGCGGCGAGGCCGCGGCGAGGAAGGGCCCGAGAAGGTGGAGGAACTCCATCTCGTAAATGGAGTAGCTGCCTAGCTAGATGCTGTATGGTTGATTGGTTTCAACTTTCAAGTAATTTCATGGGTCTTTTGTATTTTGAGAGAGTCCATTTTGCTCAGTTTGATGTAGTGATGTTCATGGCGTTTTCAGACAGAATTAATCCATTTTATGCAGAGTCTGAGGACTACTCAAGCAGATGATTTTAGCCGTTGTCTCCT
CDS Sequence
- >LOC_Os02g35970.1
ATGTGGGAGTCGGAGAGCGAGAGCCACGGCGGCGAGCGGGGGCTCGTCCCCGTCGGCGGCGGCGGCGGCTCAGGCCGGCACGAGGCGGCGCTCAAGAACGACGGCTTCGTCCGCAGAGACCGGTCTTGGTATGTCAACAGTGACATCCCCAGCGATCTGCTCGTCAAAGTGGGAGACGTGAACTTCTACCTTCACAAGTATCCGATGATCTCCCGGAGCGGGCGGATGAGCCGCGCCGTGTACGAGTCGTCGGCGGCAGATGAGGCGGAGGCGGACGCGGCGGCGGCGGTGGCGGTGGTGGAGATGGGCGACCTGCCGGGTGGCGCGGGGTCGTTCGAGCTGGCGGCGCGGTTCAGCTACGGGATGGCGGTGGACCTGACGGCGGCGAACATCTCCGGGCTTCGCTGCGCCGCCGAGTACCTGGAGATGACGGAGGAGATGGAGGAAGGGAACCTCATCTTCAAGACGGAGGCGTTCCTCAGCTACGTGGTGCTGTCGTCGTGGCGCGACTCCATCGCCGTGCTCAAGAGCTGCGAGGCGCTCTCGCCGTGGGCGGAGAACCTGCAGATCGTGCGGCGGTGCAGCGAGTCCATCGCCTGGAAGGCGTGCGCCAACCCGCGCGGCGTGCGCTGGGCGTACACCGGCGCCGGCGCCGGCAGCGGAGGAGCGCGCGGGGGCCCGGCGGCGATCAGGGGAGGTGGCGGCTCTGGCGGCACGGCGAGCCCGCGGTGGAACGTCGGTGGCGGCGGAGGGGGGGAGTCGAAGGAGTCGAGCCCGAGCAGGCAGGCGGTGCCGCCGGCGGACTGGTGGTTCGAGGACGTGTCCGTGCTCAGGATCGACCACTTCGTGCGCGTCGTCACCGCCATCAAGGTCAAAGGCATGCGGTTCGACCTGATCGGCGCGGCGATCACCCACTACGCGTCGAAATGGCTCCCCGGCCTCACCAAGGACGCCCCGCTCGGCGCCACCCACGACGAGCCGTGGGCGCAGGCCTCCGCCGCCGGCGTCGGCGGCGGCGGCCTCCACATGATGATCATCTCCGGCGCCGGCGGCGGCAAGGACGACGTCCTCGCCGCCTGCAGCGCGCCGTCGCGCGAGCAGCGCATGGTGGTGGAGAGCATCATCAGCATCACCCCGCCGCAGCGGGACAGCGTCTCCTGCGGCTTCCTCCTCCGCCTCCTCCGCCTCGCCATCATGCTCAGGGCCGCCCCGGCGCTGGTCACCGAGCTCGAGAAGCGCGTCGGGATGCAGCTCGAGCAGGCGGCGCTCGCCGACCTCCTCATCCCCTCCTACGGCGGCCGCGCCGCCGACACCGCCTACGACGTCGACCTCGTGCAGCGCCTCGTCGAGCACTTCCTGGTTCAGGAGCAGACGGAGATGGCGGTGGCGTCCAGCCCCGGCCGCGGCGACCCTCCGCCGCCGCCGCAGCCGGAGTACTACAGCGGGAGGATGCCGCCGTCGTCCGCGGCCGCGGCGTCGGCGTCGGCGTCGACGGGCGGGCTGAACGCCAAGGCGCGCGTCGCCCGGCTGCTCGACAGCTACCTCTCCGAGGTCTCCCGCGACCGCAACCTCTCCCTCACCAAGTTCCAGGTCCTCGCCGAGTCGCTGCCGGAGTCGGCGCGCGCCTGCGACGACGGCCTGTACCGCGCCGTCGACTCCTACCTCAAGGCGCACCCGACGCTGACGGAGCACGAGAGGAAGAGGCTGTGCAGGGTGATGGACTGCCAGAAGCTGTCGTTCGACGCGTGCATGCACGCGGCGCAGAACGAGAGGCTGCCGCTGCGGGTGGTGGTGCAGGTGCTCTTCACCGAGCAGGTCAAGATCAGCAACGCGCTGGCGAGCTCCTCCGCGGCGCTCAGGTCGTCGTCTTCGGCGCCGGGGGCGGACGCCGCGCCGGCGATGCCGACGACGCGGCGGCAGCTGCTGGACGGGACGCCGCAGTCGTTCCAGGAGGGGTGGGCGGCGGCGAAGAAGGACATCAACACGCTCAAGTTCGAGCTGGAGAGCATGAAGGCCAAGTACCTGGAGCTCCAGCACGAGATGGACGCGCTCCAGAAACAGGTGGACGGCCGCGGCGGCGGCGCGCCGTCGCCGGCGGCCGCCAAGATCGGCAAGCAGCAGCAGCAGGGCACGTCGGCGTCGGCGTGGAGCAGCGGGTGGAAGAAGCTGGGCAGGCTGGCCAAGATGTCCGGCGCCGACGCGGCGGCCGGTGGTGGCGTGGCGCCGCCCGGCGGCGGCGAGGCCGCGGCGAGGAAGGGCCCGAGAAGGTGGAGGAACTCCATCTCGTAA
Protein Sequence
- >LOC_Os02g35970.1
MWESESESHGGERGLVPVGGGGGSGRHEAALKNDGFVRRDRSWYVNSDIPSDLLVKVGDVNFYLHKYPMISRSGRMSRAVYESSAADEAEADAAAAVAVVEMGDLPGGAGSFELAARFSYGMAVDLTAANISGLRCAAEYLEMTEEMEEGNLIFKTEAFLSYVVLSSWRDSIAVLKSCEALSPWAENLQIVRRCSESIAWKACANPRGVRWAYTGAGAGSGGARGGPAAIRGGGGSGGTASPRWNVGGGGGGESKESSPSRQAVPPADWWFEDVSVLRIDHFVRVVTAIKVKGMRFDLIGAAITHYASKWLPGLTKDAPLGATHDEPWAQASAAGVGGGGLHMMIISGAGGGKDDVLAACSAPSREQRMVVESIISITPPQRDSVSCGFLLRLLRLAIMLRAAPALVTELEKRVGMQLEQAALADLLIPSYGGRAADTAYDVDLVQRLVEHFLVQEQTEMAVASSPGRGDPPPPPQPEYYSGRMPPSSAAAASASASTGGLNAKARVARLLDSYLSEVSRDRNLSLTKFQVLAESLPESARACDDGLYRAVDSYLKAHPTLTEHERKRLCRVMDCQKLSFDACMHAAQNERLPLRVVVQVLFTEQVKISNALASSSAALRSSSSAPGADAAPAMPTTRRQLLDGTPQSFQEGWAAAKKDINTLKFELESMKAKYLELQHEMDALQKQVDGRGGGAPSPAAAKIGKQQQQGTSASAWSSGWKKLGRLAKMSGADAAAGGGVAPPGGGEAAARKGPRRWRNSIS*