Information report for OsPUB43
Gene Details
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Functional Descriptions
- CRISPR-Cas9 Mediated Mutation in OsPUB43 Improves Grain Length and Weight in Rice by Promoting Cell Proliferation in Spikelet Hull.
- Scanning electron microscopy analysis reveals that OsPUB43 modulates the grain size mainly by inhibiting cell proliferation in the spikelet hull.
- Phenotypes of large grain are observed in OsPUB43 mutants, whereas overexpression of OsPUB43 results in short grains.
- Collectively, our results indicate that OsPUB43 negatively controls the gain size by modulating the expression of BR-responsive genes as well as MADS-box genes that are required for lemma/palea specification, suggesting that OsPUB43 has a potential valuable application in the enlargement of grain size in rice.
- The OsPUB43 mutants display high sensitivity to exogenous BR, while OsPUB43-OE lines are hyposensitive to BR.
- The OsPUB43 protein is localized in the cytoplasm and nucleus.
Functional Keywords
- spikelet , grain , grain-length , grain-size , BR , cytoplasm , nucleus , cell-proliferation
Literature and News
Gene Resources
- UniProt: Q0E0I9
- EMBL: AP014958
- AlphaFoldDB: Q0E0I9
- EnsemblPlants: Os02t0548700-01
- Gramene: Os02t0548700-01
- KEGG: osa:4329616
- Orthologous matrix: DCIANSD
- InterPro: IPR003613, IPR011989, IPR013083
- PANTHER: PTHR22849, PTHR22849:SF112
- SUPFAM: SSF57850
- PROSITE: PS51698
- Gene3D: 1.25.10.10, 3.30.40.10
- OrthoDB: Q0E0I9
- SWISS-MODEL: Q0E0I9
- Conserved Domain Database: cd16664
- eggNOG: ENOG502QRXY
Homologs
- Arabidopsis thaliana: AT3G19380
- Beta vulgaris: BVRB_7g174060
- Daucus carota: DCAR_005320
- Glycine max: GmPUB21
- Gossypium hirsutum: Gohir.A05G096300, Gohir.A03G041500
- Lactuca sativa: gene-LSAT_8X76040
- Malus domestica: MdPUB23
- Manihot esculenta: MANES_11G131500
- Nicotiana attenuata: A4A49_12969
- Populus trichocarpa: POPTR_009G029600v3
- Prunus avium: Pav_sc0000087.1_g580.1.mk
- Prunus persica: PRUPE_6G079400
- Rosa chinensis: RchiOBHm_Chr5g0063991
- Solanum lycopersicum: Solyc11g066040.2, Solyc06g076040.3
- Solanum tuberosum: PGSC0003DMG400000396
Sequences
cDNA Sequence
- >LOC_Os02g34410.1
CCCACTCCTCACCTCCTCCTCCTCTCCACCCACCCACCAACCCACCCCACGCCGCGATTCCGCGAAGCTGAGCTGAGAATCGGATGCCGGGGAGCGTGCCGCTGGCGCTGGGCCTGGACACGGCGGGGGTGCAGGTGCCCTGGTACTTCCGGTGCCCCATCTCCCTGGAGCTGATGCGCGACCCGGTGACGGTGTCCACCGGCCAGACCTACGACCGCGCCAGCATCGAGTCGTGGGTGGCCACCGGCAACACCACCTGCCCCGTCACCCGCTCCCCGCTCGACCGCGCCTTCACCCTCATCCCCAACCACACCCTCCGCCGCCTCATCCAGGACTGGTGCGTCGCCCACCGCTCCCTCGGCGTCGAGCGCATCCCCACCCCGAAGCAGCCAGCCGACCCCGACCTCATCCGCTCCCTCCTCGCCCAGTGCCCCGCGCTCCCGCCGCTCCGCAAGCTCAGGGCGCTCGCCCGGGACTCCGACAAGAACCGCCTCGTCATGGCCACCCACGAGACACGGGCGGCGCTCGTTGACATGGCGTTTGGGACGAACGCTGGTGGGGAGGAGGTCGAGGCCGAGGCGATGGCGGTTCTTGCTATGGTTGGGTTGGGTGAGGCTGAGGCTGTGGAGGTGGTGGGGAGGAGGGAGAGGGTGGCGAGGCTCGGGGAGCTGCTGGTGAGTGGGGAAGGGGCGGCGACGACGACGGCGACGCTGGAGTGCAGGGTTAATGCTGGGGCTGTGGTGGAGGCGGTTGCGGCGGTGTCCGGCGCGGACGCCAGGGCGGTGCTGGGCGCGGCGGAGGGGGTCATGGAGGGGCTCGTCGCGCTGGTCGAGGAGAAGGCCCACGCGCGCGCCGTCCGCGTCGGGATCCGTGGACTGTTCGCGCTCTGCCTCGCCAAGGAGAACCGCCCCCGCGCCGTCGCCGCCGGTGCCGCGGCGGCGCTCGCGCGTCGCGTCGCGGAGGGAGGCGGTGGCGCGGGGGAGCCGGAGCGCGCGCTGGCCGCGGTGGAGCGGCTGTGCCGGACGGAGGGCGGGCGCGACGCGGTGGTCGCGGGCGCCGGGGGAGGCGCGGCGGCGGTGTGCGCGCTGGTGCGCGCCATGTCCGGGCGGTCAGCGGAGCACGCGGCGGGGGCGCTGGTGGCGGTGGTGGGCGGATCGGAGCCGCTCCAGGTGGAGGCGGTCCGCGCGGGCGCCATGAGCCAGCTCCTCCTCATGGTGCAGGGCGGGTGCTCGGAGCGGGCGAAGCGGAAGGCGCAGCACCTGCTCAAGCTGCTCCGGTCGGCGTGGCCCGCCGCCGACTCCATCGCCAACTCCGACGACTTCCTCCAACCATACTAACAACCGCCATTGCGGCCGGCGGCAGCGGCGGCGGTAGTAGCAACCAAGCATCGACGACGGAGAAAAAAAAAAGAAAAGCT
CDS Sequence
- >LOC_Os02g34410.1
ATGCCGGGGAGCGTGCCGCTGGCGCTGGGCCTGGACACGGCGGGGGTGCAGGTGCCCTGGTACTTCCGGTGCCCCATCTCCCTGGAGCTGATGCGCGACCCGGTGACGGTGTCCACCGGCCAGACCTACGACCGCGCCAGCATCGAGTCGTGGGTGGCCACCGGCAACACCACCTGCCCCGTCACCCGCTCCCCGCTCGACCGCGCCTTCACCCTCATCCCCAACCACACCCTCCGCCGCCTCATCCAGGACTGGTGCGTCGCCCACCGCTCCCTCGGCGTCGAGCGCATCCCCACCCCGAAGCAGCCAGCCGACCCCGACCTCATCCGCTCCCTCCTCGCCCAGTGCCCCGCGCTCCCGCCGCTCCGCAAGCTCAGGGCGCTCGCCCGGGACTCCGACAAGAACCGCCTCGTCATGGCCACCCACGAGACACGGGCGGCGCTCGTTGACATGGCGTTTGGGACGAACGCTGGTGGGGAGGAGGTCGAGGCCGAGGCGATGGCGGTTCTTGCTATGGTTGGGTTGGGTGAGGCTGAGGCTGTGGAGGTGGTGGGGAGGAGGGAGAGGGTGGCGAGGCTCGGGGAGCTGCTGGTGAGTGGGGAAGGGGCGGCGACGACGACGGCGACGCTGGAGTGCAGGGTTAATGCTGGGGCTGTGGTGGAGGCGGTTGCGGCGGTGTCCGGCGCGGACGCCAGGGCGGTGCTGGGCGCGGCGGAGGGGGTCATGGAGGGGCTCGTCGCGCTGGTCGAGGAGAAGGCCCACGCGCGCGCCGTCCGCGTCGGGATCCGTGGACTGTTCGCGCTCTGCCTCGCCAAGGAGAACCGCCCCCGCGCCGTCGCCGCCGGTGCCGCGGCGGCGCTCGCGCGTCGCGTCGCGGAGGGAGGCGGTGGCGCGGGGGAGCCGGAGCGCGCGCTGGCCGCGGTGGAGCGGCTGTGCCGGACGGAGGGCGGGCGCGACGCGGTGGTCGCGGGCGCCGGGGGAGGCGCGGCGGCGGTGTGCGCGCTGGTGCGCGCCATGTCCGGGCGGTCAGCGGAGCACGCGGCGGGGGCGCTGGTGGCGGTGGTGGGCGGATCGGAGCCGCTCCAGGTGGAGGCGGTCCGCGCGGGCGCCATGAGCCAGCTCCTCCTCATGGTGCAGGGCGGGTGCTCGGAGCGGGCGAAGCGGAAGGCGCAGCACCTGCTCAAGCTGCTCCGGTCGGCGTGGCCCGCCGCCGACTCCATCGCCAACTCCGACGACTTCCTCCAACCATACTAA
Protein Sequence
- >LOC_Os02g34410.1
MPGSVPLALGLDTAGVQVPWYFRCPISLELMRDPVTVSTGQTYDRASIESWVATGNTTCPVTRSPLDRAFTLIPNHTLRRLIQDWCVAHRSLGVERIPTPKQPADPDLIRSLLAQCPALPPLRKLRALARDSDKNRLVMATHETRAALVDMAFGTNAGGEEVEAEAMAVLAMVGLGEAEAVEVVGRRERVARLGELLVSGEGAATTTATLECRVNAGAVVEAVAAVSGADARAVLGAAEGVMEGLVALVEEKAHARAVRVGIRGLFALCLAKENRPRAVAAGAAAALARRVAEGGGGAGEPERALAAVERLCRTEGGRDAVVAGAGGGAAAVCALVRAMSGRSAEHAAGALVAVVGGSEPLQVEAVRAGAMSQLLLMVQGGCSERAKRKAQHLLKLLRSAWPAADSIANSDDFLQPY*