Gene Details:
- MSU gene ID: LOC_Os02g28110
- RAPdb gene ID: Os02g0482400
- Gene Symbol: ODCb
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Gene expression followed by reverse transcription-PCR suggested that putrescine could have a post-translational impact on genes coding for ADC (ADCa) and ODC (ODCa and ODCb) but could induce a transcriptional activation of genes coding for PAO (PAOb) mainly in the shoot of salt-stressed plants.
Function-related keywords:
Literature:
- Putrescine differently influences the effect of salt stress on polyamine metabolism and ethylene synthesis in rice cultivars differing in salt resistance . DOI: 10.1093/jxb/erq118 ; PMID: 20472577
Related News:
Gene Resources:
- NCBI ID: NM_001053389
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os02g28110.1
ACGAGCTAGAACACTCGCGACGAGGACCTGTGCCGCTCGCTCGTTCGCTCTGTGACTGTACGTACATTACAGAAGCAGAAATCCATGGCAGCAGCAGAAGGATATCAGATGGAGGCCGCCGTGCTCGCGGCGCCCGTGGTGAAGGACCGGGAGGTGCTCCGCCTCCGGCGAGACGCGGCCGGCCGTCGAGACGTTACCGGACTCGTGCGGACCATCGTCGCCGCGGCACCGCCGCCCGACAGTACGACCCGCACCGCGGCGGCGGGCGCGTTCAACGTGATCGACCTCGGCGAGGTGGCGCGGCTGTTCGCGGCGTGGTGGCGCGGGCTCCGCGGCGTGCGTCCCTACTACGCCGTCAAGTGCAACCCCAACCCGGCGCTGCTCGGCGCGCTCGCGGGGCTCGGCGCCGGCTTCGACTGCGCCAGCCGCGCCGAGATGGAGGCCGTGCTGGCGCTCGGCGTCGCGGCCGACCGCGTCGTCTACGCGAACCCGTGCAAGCTGGAGCCCCACCTGGAGTACGCGGCCGGCGTCGGCGTCGACCTCACCACCTTCGACTCCGAGGAGGAGGTCGGCAAGATCAAGCGCTGCCACCCGGGGTGCCGGCTGCTGCTACGGATCAAGGCCCCCGACGGCGACGATGGCGGCGGCGCCATGCTAAACTTGGGAACCAAGTACGGCGCGCACCGGGACGAGGTGGTGCCGCTCCTCGCCGCCGCGCGGCGAGCCGGGATGGCCGTCGTCGGCGTCTCGTTCCACGTCGGGAGCGCCGTGTCCCGCGTCGGCATCTACGCCGCCGCCATCGAGGCGGCCCGCGTTCGACGCCGCCGCCGCGCTCGGCATGCCGCGCATGCACGTGCTAGACATCGGCGGGGGATTCAAGGCCGGCGGCGGCGGCGGCGAATCCACGTTCCAGGAGGCAAGCGCCGTGATCAGCGCGGCCCTCGCGAGGCACTTCGGTGGCGACGACATGCCCAGCGGCGTCGAGGTGATAGCCGAGCCGGGGCGCTACTTCGCCGAGACGGCGTTCGCGCTCGCCGCCCGCATCTTCGGGAAGCGCACGCGCGGCGAGGTGCGCGAGTACTGGATCGACGACGGCATGTTCGGCACCCTGTGCTGCGTGCACTTCGAGAACTACGTGCCGCGCCCGGCGCCGGTGACCGCCACCGCCGACGACGGCGACGAGCAGGCGGCGACCATGGGCGGCGAGATGATGATCACGTCGACGAACACGTCGACGAAGACGCACCCGTCGACGGTGTTCGGCCCCACGCTGGACTCGTTCGACGAGGTGGTGAGGGGTTATCAGCTGCCGGAGCTGTGCACCGGGGACTGGCTGGTGTTCGACGACGTCGGCGCGTACACCACCGTGTGCAGCTCAGACTTCAACGGGTTCTCCACGTCCAACATGAAGACCTACCTCGCCTACTCCTGCTAGATCACTGGGAAAGTGCCACCTAAATATCGAATATATTGTTTCGTACATACCACCCAGGGTCGGAAATTTCGGTGACCCCCGATATAATATTAATTCGGCCGAAATTTTTGAATTTTTCAATTCTTTCATGAATTTGGATAATGTTTGTTTAAATTCAACTAAATTTTGGATTTCGGTAAA
CDS Sequence
- >LOC_Os02g28110.1
ATGGCAGCAGCAGAAGGATATCAGATGGAGGCCGCCGTGCTCGCGGCGCCCGTGGTGAAGGACCGGGAGGTGCTCCGCCTCCGGCGAGACGCGGCCGGCCGTCGAGACGTTACCGGACTCGTGCGGACCATCGTCGCCGCGGCACCGCCGCCCGACAGTACGACCCGCACCGCGGCGGCGGGCGCGTTCAACGTGATCGACCTCGGCGAGGTGGCGCGGCTGTTCGCGGCGTGGTGGCGCGGGCTCCGCGGCGTGCGTCCCTACTACGCCGTCAAGTGCAACCCCAACCCGGCGCTGCTCGGCGCGCTCGCGGGGCTCGGCGCCGGCTTCGACTGCGCCAGCCGCGCCGAGATGGAGGCCGTGCTGGCGCTCGGCGTCGCGGCCGACCGCGTCGTCTACGCGAACCCGTGCAAGCTGGAGCCCCACCTGGAGTACGCGGCCGGCGTCGGCGTCGACCTCACCACCTTCGACTCCGAGGAGGAGGTCGGCAAGATCAAGCGCTGCCACCCGGGGTGCCGGCTGCTGCTACGGATCAAGGCCCCCGACGGCGACGATGGCGGCGGCGCCATGCTAAACTTGGGAACCAAGTACGGCGCGCACCGGGACGAGGTGGTGCCGCTCCTCGCCGCCGCGCGGCGAGCCGGGATGGCCGTCGTCGGCGTCTCGTTCCACGTCGGGAGCGCCGTGTCCCGCGTCGGCATCTACGCCGCCGCCATCGAGGCGGCCCGCGTTCGACGCCGCCGCCGCGCTCGGCATGCCGCGCATGCACGTGCTAGACATCGGCGGGGGATTCAAGGCCGGCGGCGGCGGCGGCGAATCCACGTTCCAGGAGGCAAGCGCCGTGATCAGCGCGGCCCTCGCGAGGCACTTCGGTGGCGACGACATGCCCAGCGGCGTCGAGGTGATAGCCGAGCCGGGGCGCTACTTCGCCGAGACGGCGTTCGCGCTCGCCGCCCGCATCTTCGGGAAGCGCACGCGCGGCGAGGTGCGCGAGTACTGGATCGACGACGGCATGTTCGGCACCCTGTGCTGCGTGCACTTCGAGAACTACGTGCCGCGCCCGGCGCCGGTGACCGCCACCGCCGACGACGGCGACGAGCAGGCGGCGACCATGGGCGGCGAGATGATGATCACGTCGACGAACACGTCGACGAAGACGCACCCGTCGACGGTGTTCGGCCCCACGCTGGACTCGTTCGACGAGGTGGTGAGGGGTTATCAGCTGCCGGAGCTGTGCACCGGGGACTGGCTGGTGTTCGACGACGTCGGCGCGTACACCACCGTGTGCAGCTCAGACTTCAACGGGTTCTCCACGTCCAACATGAAGACCTACCTCGCCTACTCCTGCTAGATCACTGGGAAAGTGCCACCTAA
Protein Sequence
- >LOC_Os02g28110.1
MAAAEGYQMEAAVLAAPVVKDREVLRLRRDAAGRRDVTGLVRTIVAAAPPPDSTTRTAAAGAFNVIDLGEVARLFAAWWRGLRGVRPYYAVKCNPNPALLGALAGLGAGFDCASRAEMEAVLALGVAADRVVYANPCKLEPHLEYAAGVGVDLTTFDSEEEVGKIKRCHPGCRLLLRIKAPDGDDGGGAMLNLGTKYGAHRDEVVPLLAAARRAGMAVVGVSFHVGSAVSRVGIYAAAIEAARVRRRRRARHAAHARARHRRGIQGRRRRRRIHVPGGKRRDQRGPREALRWRRHAQRRRGDSRAGALLRRDGVRARRPHLREAHARRGARVLDRRRHVRHPVLRALRELRAAPGAGDRHRRRRRRAGGDHGRRDDDHVDEHVDEDAPVDGVRPHAGLVRRGGEGLSAAGAVHRGLAGVRRRRRVHHRVQLRLQRVLHVQHEDLPRLLLLDHWESAT*