Gene Details:
- MSU gene ID: LOC_Os02g22380
- RAPdb gene ID: Os02g0329800
- Gene Symbol: OsGT61-1 XAX1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- OsGT61-1 transcript was noted to be ABA- and NaCl-responsive and its expression was more prominent in root than in shoot tissues.
- Ultimately, XAX1 plays a fundamental role in cross-linking, providing a potential target for the improvement of use of grass biomass.
- Moreover, structures resembling the direct cross-link between xylan and lignin (ferulated arabinosyl substitutions bound to lignin monomers and dimers), together with diferulates known to cross-link xylan, are strongly reduced in XAX1.
- XAX1 (Xylosyl arabinosyl substitution of xylan 1), a rice (Oryza sativa) member of the glycosyltransferase family GT61, has been described to add xylosyl residues to arabinosyl substitutions modified by ferulic acid.
Function-related keywords:
- shoot , root , biomass , lignin , glycosyltransferase
Literature:
- The Sucrose Synthase Gene Family in Chinese Pear (Pyrus bretschneideri Rehd.): Structure, Expression, and Evolution . DOI: 10.3390/molecules23051144 ; PMID: 29751599
- XAX1 from glycosyltransferase family 61 mediates xylosyltransfer to rice xylan . DOI: 10.1073/pnas.1202079109 ; PMID: 23027943
- Hydroxycinnamic acid-modified xylan side chains and their cross-linking products in rice cell walls are reduced in the Xylosyl arabinosyl substitution of xylan 1 mutant . DOI: 10.1111/tpj.15620 ; PMID: 34862679
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os02g22380.1
CCCATCCTCACCGATCTCTCTAAACCCAAATACGCAACAAATACTCAATCGTCACATCTTAAAAAACAAAGAAAAAGGAAGAGAGAGAGAGAGGGAAAACAAAAAAGAAAAGAAAAATCAATTCCCAACCTTGCTGCTACAAATGCCTCAGGCTTAGCAACTCGACCTCCTCCCCCCTTCTCCCCTTCCTCCCTTCTTTGACTTCCCCTTTCCTCCTCCGTGCGCACGCTCTCCTGATTCATACAGCATTTCGTCGGGGATGACGTCGACGGCGTACTCCCGGCCGTCGAAGCTGCCGGGCGGCGGCAACGGCAGCGACCGCAGGCTGCCGCCGCGGCTGATGAGGGGCCTCACCACCAAGATCGAGCCCAAGAAGCTCGGCGTCGGCCTCCTCGCCGGCTGCTGCCTCGCGCTCCTCACCTACGTCTCCCTTGCCAAGCTCTTCGCAATCTACTCCCCTGTGTTCGCCAGCACAGCCAACACATCCGCTCTGATGCAGAACTCGCCGCCATCCTCGCCGGAGACGGGACCCATTCCGCCCCAAGAAACTGCAGCTGGCGCCGGAAACAATGACAGCACTGTGGACCCCGTCGATCTCCCTGAGGACAAGTCGCTGGTGGAGGCGCAGCCTCAAGAACCCGGCTTCCCCTCGGCGGAATCTCAGGAGCCTGGCTTGCCGGCGGCGCTCTCGAGGAAGGAGGATGATGCGGAGAGGGCGGCGGCGGCGGCGGCCTCGGAGATAAAGCAATCCGAGAAGAAGAACGGCGTGGCGGCGGGTGGTGATACCAAGATAAAGTGCGACGAGAACGGCGTGGACGAGGGCTTCCCGTACGCGCGGCCGTCGGTTTGCGAGCTGTACGGCGACGTCCGCGTCAGCCCCAAGCAGAAGACCATTTACGTCGTGAACCCGTCGGGCGCCGGCGGCTTCGACGAGAACGGCGAGAAGCGGCTCCGGCCCTACGCCCGCAAGGACGATTTCCTCCTCCCGGGCGTGGTGGAGGTGACTATCAAGTCCGTGCCCTCCGAGGCGGCGGCCCCCAAGTGCACGAAGCAGCACGCCGTCCCCGCCGTGGTGTTCTCCGTGGCCGGGTACACGGACAACTTCTTCCACGACATGACCGATGCCATGATCCCGCTATTCCTGACGACGGCGCACCTCAAGGGCGAGGTCCAGATCCTCATCACCAACTACAAGCCGTGGTGGGTGCAGAAGTACACGCCGCTGCTCCGCAAGCTGTCCAACTACGACGTCATCAACTTCGACGAGGACGCCGGCGTGCACTGCTTCCCGCAGGGGTACCTCGGTCTGTACCGCGACCGCGACCTCATCATCTCCCCGCACCCGACCCGCAACCCGCGCAACTACACCATGGTGGACTACAACCGCTTCCTCCGCGACGCTCTGGAGCTCCGGCGCGACCGCCCGTCGGTGCTGGGCGAGGAGCCCGGGATGCGGCCGCGGATGCTGATCATCTCCCGCGCCGGCACGCGCAAGCTGCTGAACCTCGAGGAGGTGGCCGCGGCCGCGACGGAGCTTGGTTTCAACGTGACGGTGGCGGAGGCCGGTGCTGACGTGCCCGCGTTCGCGGCGCTGGTGAACTCGGCGGACGTGCTGCTGGCCGTGCACGGCGCCGGGCTGACGAACCAGATCTTCCTCCCGGCGGAGGCCGTGGTGGTGCAGATCGTGCCGTGGGGGAACATGGACTGGATGGCGACCAACTTTTACGGGCAGCCGGCGAGGGACATGCAGCTCCGGTACGTGGAGTACTACGTCGGCGAGGAGGAGACGAGCCTGAAGCACAACTACTCGCGAGATCACATGGTGTTCAAGGACCCCAAGGCGCTCCACGCACAGGGATGGCAGACACTCGCCGCGACTATCATGAAGCAGGACGTCGAGGTCAACCTCACCAGGTTCCGGCCAATCCTGCTGCAGGCGCTCGACAGGCTGCAGCAGTAACTCGTCTATCCCAATAATCGCAGGCAGCTCATGGCACACATCAATGTATATGCCGGGACGAGACGACACGACGAGGAACAAGAACGGATACTAGTATATTGTACTGCTGCTTGAAAGAGATGATGATGATCTTAACCGGAGGAGAACCATCAGTTGTTGGCGAGGCGGTGGAAGCTTTTCGCATATTGGTAATTGGTTGGGTTGTCCATTTTGGGTTTGTAACAATTTGCATAGGCATTACACACCAAAGATGTTCGATTTTTTTGTTCTTCTTACACTTCTTCACTTCGCCAGCCCATTCAACACTATACATTCTTTTCTACTAATACGGAGCCAAACTAAACTATGGTGTTTAATTATTAAAACATCAAATTGGTCACCCAAACAAAACAAAGTGGCGATGAAAGAAAGATCCAAATCTGAGAGTTGTTTCAGACATGTGCAATCTCCTCTAATAAATTGAACAAATGGTTGTTAAACGAATCTGCATCCCGAGCGTTGAAGGGGCTTAGCTGGTGCGGACGTGCCAGCATGGAAGTGTTCGTGGAGAAGGAAAATGGATTCGATGCTCTGTCCAACACTGGTGAACTGCTGTATATGCACCCGCCTGCTGCCTGCTTTCAGCTTAAGGAAAAGATCACTAATAATTGAAAAGCACAGGCTAACTAACCGGGCTCTGCAAGAAAGCTGTGACAGGTAAGTCGTAACTAGTTTTGGGCAATCGAATACCTTCTCTCTTTTCTTCTCTTTTCTTGAGAGGCAGACAGGGAGATATAGAGAAAGACCTTCTCCTTTTATCTTTATTTTTTCTTTTTTCCTAGAACCTTCTTGCTGTCTTTTGGTAGGGAAAGAGACTAGAAAATGGAACGATGATGAATGCATGAATTTCCCATAAGAAATTGGCAAGCTAGCCTCACCTTTTCAGTATCGTATGCATCACGCGAAAAGATTAATCACAAGAGGGTGACCCGGCAACGAGAAGAGGAGATCAGCCAAGACAATCTTGTAGCCGTTAGTATGAAACACACGATTAATCACAAGCCACGCCATGCTCTTCATGC
CDS Sequence
- >LOC_Os02g22380.1
ATGACGTCGACGGCGTACTCCCGGCCGTCGAAGCTGCCGGGCGGCGGCAACGGCAGCGACCGCAGGCTGCCGCCGCGGCTGATGAGGGGCCTCACCACCAAGATCGAGCCCAAGAAGCTCGGCGTCGGCCTCCTCGCCGGCTGCTGCCTCGCGCTCCTCACCTACGTCTCCCTTGCCAAGCTCTTCGCAATCTACTCCCCTGTGTTCGCCAGCACAGCCAACACATCCGCTCTGATGCAGAACTCGCCGCCATCCTCGCCGGAGACGGGACCCATTCCGCCCCAAGAAACTGCAGCTGGCGCCGGAAACAATGACAGCACTGTGGACCCCGTCGATCTCCCTGAGGACAAGTCGCTGGTGGAGGCGCAGCCTCAAGAACCCGGCTTCCCCTCGGCGGAATCTCAGGAGCCTGGCTTGCCGGCGGCGCTCTCGAGGAAGGAGGATGATGCGGAGAGGGCGGCGGCGGCGGCGGCCTCGGAGATAAAGCAATCCGAGAAGAAGAACGGCGTGGCGGCGGGTGGTGATACCAAGATAAAGTGCGACGAGAACGGCGTGGACGAGGGCTTCCCGTACGCGCGGCCGTCGGTTTGCGAGCTGTACGGCGACGTCCGCGTCAGCCCCAAGCAGAAGACCATTTACGTCGTGAACCCGTCGGGCGCCGGCGGCTTCGACGAGAACGGCGAGAAGCGGCTCCGGCCCTACGCCCGCAAGGACGATTTCCTCCTCCCGGGCGTGGTGGAGGTGACTATCAAGTCCGTGCCCTCCGAGGCGGCGGCCCCCAAGTGCACGAAGCAGCACGCCGTCCCCGCCGTGGTGTTCTCCGTGGCCGGGTACACGGACAACTTCTTCCACGACATGACCGATGCCATGATCCCGCTATTCCTGACGACGGCGCACCTCAAGGGCGAGGTCCAGATCCTCATCACCAACTACAAGCCGTGGTGGGTGCAGAAGTACACGCCGCTGCTCCGCAAGCTGTCCAACTACGACGTCATCAACTTCGACGAGGACGCCGGCGTGCACTGCTTCCCGCAGGGGTACCTCGGTCTGTACCGCGACCGCGACCTCATCATCTCCCCGCACCCGACCCGCAACCCGCGCAACTACACCATGGTGGACTACAACCGCTTCCTCCGCGACGCTCTGGAGCTCCGGCGCGACCGCCCGTCGGTGCTGGGCGAGGAGCCCGGGATGCGGCCGCGGATGCTGATCATCTCCCGCGCCGGCACGCGCAAGCTGCTGAACCTCGAGGAGGTGGCCGCGGCCGCGACGGAGCTTGGTTTCAACGTGACGGTGGCGGAGGCCGGTGCTGACGTGCCCGCGTTCGCGGCGCTGGTGAACTCGGCGGACGTGCTGCTGGCCGTGCACGGCGCCGGGCTGACGAACCAGATCTTCCTCCCGGCGGAGGCCGTGGTGGTGCAGATCGTGCCGTGGGGGAACATGGACTGGATGGCGACCAACTTTTACGGGCAGCCGGCGAGGGACATGCAGCTCCGGTACGTGGAGTACTACGTCGGCGAGGAGGAGACGAGCCTGAAGCACAACTACTCGCGAGATCACATGGTGTTCAAGGACCCCAAGGCGCTCCACGCACAGGGATGGCAGACACTCGCCGCGACTATCATGAAGCAGGACGTCGAGGTCAACCTCACCAGGTTCCGGCCAATCCTGCTGCAGGCGCTCGACAGGCTGCAGCAGTAA
Protein Sequence
- >LOC_Os02g22380.1
MTSTAYSRPSKLPGGGNGSDRRLPPRLMRGLTTKIEPKKLGVGLLAGCCLALLTYVSLAKLFAIYSPVFASTANTSALMQNSPPSSPETGPIPPQETAAGAGNNDSTVDPVDLPEDKSLVEAQPQEPGFPSAESQEPGLPAALSRKEDDAERAAAAAASEIKQSEKKNGVAAGGDTKIKCDENGVDEGFPYARPSVCELYGDVRVSPKQKTIYVVNPSGAGGFDENGEKRLRPYARKDDFLLPGVVEVTIKSVPSEAAAPKCTKQHAVPAVVFSVAGYTDNFFHDMTDAMIPLFLTTAHLKGEVQILITNYKPWWVQKYTPLLRKLSNYDVINFDEDAGVHCFPQGYLGLYRDRDLIISPHPTRNPRNYTMVDYNRFLRDALELRRDRPSVLGEEPGMRPRMLIISRAGTRKLLNLEEVAAAATELGFNVTVAEAGADVPAFAALVNSADVLLAVHGAGLTNQIFLPAEAVVVQIVPWGNMDWMATNFYGQPARDMQLRYVEYYVGEEETSLKHNYSRDHMVFKDPKALHAQGWQTLAATIMKQDVEVNLTRFRPILLQALDRLQQ*