Information report for OsGT61-1;XAX1
Gene Details
|
|
Functional Descriptions
- OsGT61-1 transcript was noted to be ABA- and NaCl-responsive and its expression was more prominent in root than in shoot tissues.
- Ultimately, XAX1 plays a fundamental role in cross-linking, providing a potential target for the improvement of use of grass biomass.
- Moreover, structures resembling the direct cross-link between xylan and lignin (ferulated arabinosyl substitutions bound to lignin monomers and dimers), together with diferulates known to cross-link xylan, are strongly reduced in XAX1.
- XAX1 (Xylosyl arabinosyl substitution of xylan 1), a rice (Oryza sativa) member of the glycosyltransferase family GT61, has been described to add xylosyl residues to arabinosyl substitutions modified by ferulic acid.
Functional Keywords
- shoot , root , biomass , lignin , glycosyltransferase
Literature and News
- The Sucrose Synthase Gene Family in Chinese Pear (Pyrus bretschneideri Rehd.): Structure, Expression, and Evolution . DOI: 10.3390/molecules23051144 ; PMID: 29751599
- XAX1 from glycosyltransferase family 61 mediates xylosyltransfer to rice xylan . DOI: 10.1073/pnas.1202079109 ; PMID: 23027943
- Hydroxycinnamic acid-modified xylan side chains and their cross-linking products in rice cell walls are reduced in the Xylosyl arabinosyl substitution of xylan 1 mutant . DOI: 10.1111/tpj.15620 ; PMID: 34862679
Gene Resources
- UniProt: Q6Z7I3
- EMBL: AP004854, AP008208, AP014958
- AlphaFoldDB: Q6Z7I3
- EnsemblPlants: Os02t0329800-01
- Gramene: Os02t0329800-01
- KEGG: dosa:Os02g0329800, osa:4329203
Homologs
- Arabidopsis thaliana: AT2G41640
Sequences
cDNA Sequence
- >LOC_Os02g22380.1
CCCATCCTCACCGATCTCTCTAAACCCAAATACGCAACAAATACTCAATCGTCACATCTTAAAAAACAAAGAAAAAGGAAGAGAGAGAGAGAGGGAAAACAAAAAAGAAAAGAAAAATCAATTCCCAACCTTGCTGCTACAAATGCCTCAGGCTTAGCAACTCGACCTCCTCCCCCCTTCTCCCCTTCCTCCCTTCTTTGACTTCCCCTTTCCTCCTCCGTGCGCACGCTCTCCTGATTCATACAGCATTTCGTCGGGGATGACGTCGACGGCGTACTCCCGGCCGTCGAAGCTGCCGGGCGGCGGCAACGGCAGCGACCGCAGGCTGCCGCCGCGGCTGATGAGGGGCCTCACCACCAAGATCGAGCCCAAGAAGCTCGGCGTCGGCCTCCTCGCCGGCTGCTGCCTCGCGCTCCTCACCTACGTCTCCCTTGCCAAGCTCTTCGCAATCTACTCCCCTGTGTTCGCCAGCACAGCCAACACATCCGCTCTGATGCAGAACTCGCCGCCATCCTCGCCGGAGACGGGACCCATTCCGCCCCAAGAAACTGCAGCTGGCGCCGGAAACAATGACAGCACTGTGGACCCCGTCGATCTCCCTGAGGACAAGTCGCTGGTGGAGGCGCAGCCTCAAGAACCCGGCTTCCCCTCGGCGGAATCTCAGGAGCCTGGCTTGCCGGCGGCGCTCTCGAGGAAGGAGGATGATGCGGAGAGGGCGGCGGCGGCGGCGGCCTCGGAGATAAAGCAATCCGAGAAGAAGAACGGCGTGGCGGCGGGTGGTGATACCAAGATAAAGTGCGACGAGAACGGCGTGGACGAGGGCTTCCCGTACGCGCGGCCGTCGGTTTGCGAGCTGTACGGCGACGTCCGCGTCAGCCCCAAGCAGAAGACCATTTACGTCGTGAACCCGTCGGGCGCCGGCGGCTTCGACGAGAACGGCGAGAAGCGGCTCCGGCCCTACGCCCGCAAGGACGATTTCCTCCTCCCGGGCGTGGTGGAGGTGACTATCAAGTCCGTGCCCTCCGAGGCGGCGGCCCCCAAGTGCACGAAGCAGCACGCCGTCCCCGCCGTGGTGTTCTCCGTGGCCGGGTACACGGACAACTTCTTCCACGACATGACCGATGCCATGATCCCGCTATTCCTGACGACGGCGCACCTCAAGGGCGAGGTCCAGATCCTCATCACCAACTACAAGCCGTGGTGGGTGCAGAAGTACACGCCGCTGCTCCGCAAGCTGTCCAACTACGACGTCATCAACTTCGACGAGGACGCCGGCGTGCACTGCTTCCCGCAGGGGTACCTCGGTCTGTACCGCGACCGCGACCTCATCATCTCCCCGCACCCGACCCGCAACCCGCGCAACTACACCATGGTGGACTACAACCGCTTCCTCCGCGACGCTCTGGAGCTCCGGCGCGACCGCCCGTCGGTGCTGGGCGAGGAGCCCGGGATGCGGCCGCGGATGCTGATCATCTCCCGCGCCGGCACGCGCAAGCTGCTGAACCTCGAGGAGGTGGCCGCGGCCGCGACGGAGCTTGGTTTCAACGTGACGGTGGCGGAGGCCGGTGCTGACGTGCCCGCGTTCGCGGCGCTGGTGAACTCGGCGGACGTGCTGCTGGCCGTGCACGGCGCCGGGCTGACGAACCAGATCTTCCTCCCGGCGGAGGCCGTGGTGGTGCAGATCGTGCCGTGGGGGAACATGGACTGGATGGCGACCAACTTTTACGGGCAGCCGGCGAGGGACATGCAGCTCCGGTACGTGGAGTACTACGTCGGCGAGGAGGAGACGAGCCTGAAGCACAACTACTCGCGAGATCACATGGTGTTCAAGGACCCCAAGGCGCTCCACGCACAGGGATGGCAGACACTCGCCGCGACTATCATGAAGCAGGACGTCGAGGTCAACCTCACCAGGTTCCGGCCAATCCTGCTGCAGGCGCTCGACAGGCTGCAGCAGTAACTCGTCTATCCCAATAATCGCAGGCAGCTCATGGCACACATCAATGTATATGCCGGGACGAGACGACACGACGAGGAACAAGAACGGATACTAGTATATTGTACTGCTGCTTGAAAGAGATGATGATGATCTTAACCGGAGGAGAACCATCAGTTGTTGGCGAGGCGGTGGAAGCTTTTCGCATATTGGTAATTGGTTGGGTTGTCCATTTTGGGTTTGTAACAATTTGCATAGGCATTACACACCAAAGATGTTCGATTTTTTTGTTCTTCTTACACTTCTTCACTTCGCCAGCCCATTCAACACTATACATTCTTTTCTACTAATACGGAGCCAAACTAAACTATGGTGTTTAATTATTAAAACATCAAATTGGTCACCCAAACAAAACAAAGTGGCGATGAAAGAAAGATCCAAATCTGAGAGTTGTTTCAGACATGTGCAATCTCCTCTAATAAATTGAACAAATGGTTGTTAAACGAATCTGCATCCCGAGCGTTGAAGGGGCTTAGCTGGTGCGGACGTGCCAGCATGGAAGTGTTCGTGGAGAAGGAAAATGGATTCGATGCTCTGTCCAACACTGGTGAACTGCTGTATATGCACCCGCCTGCTGCCTGCTTTCAGCTTAAGGAAAAGATCACTAATAATTGAAAAGCACAGGCTAACTAACCGGGCTCTGCAAGAAAGCTGTGACAGGTAAGTCGTAACTAGTTTTGGGCAATCGAATACCTTCTCTCTTTTCTTCTCTTTTCTTGAGAGGCAGACAGGGAGATATAGAGAAAGACCTTCTCCTTTTATCTTTATTTTTTCTTTTTTCCTAGAACCTTCTTGCTGTCTTTTGGTAGGGAAAGAGACTAGAAAATGGAACGATGATGAATGCATGAATTTCCCATAAGAAATTGGCAAGCTAGCCTCACCTTTTCAGTATCGTATGCATCACGCGAAAAGATTAATCACAAGAGGGTGACCCGGCAACGAGAAGAGGAGATCAGCCAAGACAATCTTGTAGCCGTTAGTATGAAACACACGATTAATCACAAGCCACGCCATGCTCTTCATGC
CDS Sequence
- >LOC_Os02g22380.1
ATGACGTCGACGGCGTACTCCCGGCCGTCGAAGCTGCCGGGCGGCGGCAACGGCAGCGACCGCAGGCTGCCGCCGCGGCTGATGAGGGGCCTCACCACCAAGATCGAGCCCAAGAAGCTCGGCGTCGGCCTCCTCGCCGGCTGCTGCCTCGCGCTCCTCACCTACGTCTCCCTTGCCAAGCTCTTCGCAATCTACTCCCCTGTGTTCGCCAGCACAGCCAACACATCCGCTCTGATGCAGAACTCGCCGCCATCCTCGCCGGAGACGGGACCCATTCCGCCCCAAGAAACTGCAGCTGGCGCCGGAAACAATGACAGCACTGTGGACCCCGTCGATCTCCCTGAGGACAAGTCGCTGGTGGAGGCGCAGCCTCAAGAACCCGGCTTCCCCTCGGCGGAATCTCAGGAGCCTGGCTTGCCGGCGGCGCTCTCGAGGAAGGAGGATGATGCGGAGAGGGCGGCGGCGGCGGCGGCCTCGGAGATAAAGCAATCCGAGAAGAAGAACGGCGTGGCGGCGGGTGGTGATACCAAGATAAAGTGCGACGAGAACGGCGTGGACGAGGGCTTCCCGTACGCGCGGCCGTCGGTTTGCGAGCTGTACGGCGACGTCCGCGTCAGCCCCAAGCAGAAGACCATTTACGTCGTGAACCCGTCGGGCGCCGGCGGCTTCGACGAGAACGGCGAGAAGCGGCTCCGGCCCTACGCCCGCAAGGACGATTTCCTCCTCCCGGGCGTGGTGGAGGTGACTATCAAGTCCGTGCCCTCCGAGGCGGCGGCCCCCAAGTGCACGAAGCAGCACGCCGTCCCCGCCGTGGTGTTCTCCGTGGCCGGGTACACGGACAACTTCTTCCACGACATGACCGATGCCATGATCCCGCTATTCCTGACGACGGCGCACCTCAAGGGCGAGGTCCAGATCCTCATCACCAACTACAAGCCGTGGTGGGTGCAGAAGTACACGCCGCTGCTCCGCAAGCTGTCCAACTACGACGTCATCAACTTCGACGAGGACGCCGGCGTGCACTGCTTCCCGCAGGGGTACCTCGGTCTGTACCGCGACCGCGACCTCATCATCTCCCCGCACCCGACCCGCAACCCGCGCAACTACACCATGGTGGACTACAACCGCTTCCTCCGCGACGCTCTGGAGCTCCGGCGCGACCGCCCGTCGGTGCTGGGCGAGGAGCCCGGGATGCGGCCGCGGATGCTGATCATCTCCCGCGCCGGCACGCGCAAGCTGCTGAACCTCGAGGAGGTGGCCGCGGCCGCGACGGAGCTTGGTTTCAACGTGACGGTGGCGGAGGCCGGTGCTGACGTGCCCGCGTTCGCGGCGCTGGTGAACTCGGCGGACGTGCTGCTGGCCGTGCACGGCGCCGGGCTGACGAACCAGATCTTCCTCCCGGCGGAGGCCGTGGTGGTGCAGATCGTGCCGTGGGGGAACATGGACTGGATGGCGACCAACTTTTACGGGCAGCCGGCGAGGGACATGCAGCTCCGGTACGTGGAGTACTACGTCGGCGAGGAGGAGACGAGCCTGAAGCACAACTACTCGCGAGATCACATGGTGTTCAAGGACCCCAAGGCGCTCCACGCACAGGGATGGCAGACACTCGCCGCGACTATCATGAAGCAGGACGTCGAGGTCAACCTCACCAGGTTCCGGCCAATCCTGCTGCAGGCGCTCGACAGGCTGCAGCAGTAA
Protein Sequence
- >LOC_Os02g22380.1
MTSTAYSRPSKLPGGGNGSDRRLPPRLMRGLTTKIEPKKLGVGLLAGCCLALLTYVSLAKLFAIYSPVFASTANTSALMQNSPPSSPETGPIPPQETAAGAGNNDSTVDPVDLPEDKSLVEAQPQEPGFPSAESQEPGLPAALSRKEDDAERAAAAAASEIKQSEKKNGVAAGGDTKIKCDENGVDEGFPYARPSVCELYGDVRVSPKQKTIYVVNPSGAGGFDENGEKRLRPYARKDDFLLPGVVEVTIKSVPSEAAAPKCTKQHAVPAVVFSVAGYTDNFFHDMTDAMIPLFLTTAHLKGEVQILITNYKPWWVQKYTPLLRKLSNYDVINFDEDAGVHCFPQGYLGLYRDRDLIISPHPTRNPRNYTMVDYNRFLRDALELRRDRPSVLGEEPGMRPRMLIISRAGTRKLLNLEEVAAAATELGFNVTVAEAGADVPAFAALVNSADVLLAVHGAGLTNQIFLPAEAVVVQIVPWGNMDWMATNFYGQPARDMQLRYVEYYVGEEETSLKHNYSRDHMVFKDPKALHAQGWQTLAATIMKQDVEVNLTRFRPILLQALDRLQQ*