Gene Details:

Functional Descriptions:

  • We isolated 24 sequences which have putative functions in distinct cellular processes, such as transcription regulation (OsWRKY80), stress response (OsGAP1, DEAD-BOX RNA helicase), proteolysis (oryzain-alpha, rhomboid protein), photosynthesis (chlorophyll a/b binding protein), sugar metabolism (beta glucosidase) and electron transport (NADH ubiquinone oxireductase).
  • The finding that OsYchF1 and OsGAP1 are involved in plant defense response might shed light on the functional roles of YchF homologues in plants.
  • G-proteins (guanine nucleotide-binding proteins that usually exhibit GTPase activities) and related signal transduction processes play important roles in mediating plant defense responses; here, a rice (Oryza sativa) cDNA clone, OsGAP1, encoding a GTPase-activating protein (GAP) that also contains a protein kinase C conserved region 2 (C2) domain is reported.
  • On the other hand, the ability to alleviate salt stress by OsGAP1 is dependent only on its ability to bind OsYchF1 and is independent of its phospholipid-binding activity.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os02g22130.1
    AAGGAGTAACGAGTCCACTTTCTCAAGCGCTAATCTAATCTACTTGGGGCAGTGGTAACAGGGGGAGGCCAACGCGGGGGAAACAGCTGACGCGCTCCGCTCCGTTCCGCTGCCGCCGTTGGCCGGCCGGGCGGTCGCTGTTGCTGACTTGACCAGAGACGAGCAGCAAGGGGGCAGTTGGATTGGATTAGAGGGTGCTTTTATATAGAGGAGCACGAGGAGGAGGAGGAGGAGGGCCATCAAGCATATCCATCTCCGATTCACAGATTCTTTCTGGAGATCCATCATCCAGCGAGAGCGAGAGCGAGAGGGAGAGGAAGAGGGAAAGCCGCCACCGCCATGTTGGGGCATCTGGTTGGGCTGGTGAAGGTGCGGGTGGTGAGGGGCGTCAACCTCGCCGTCCGCGACCTCCGCTCCAGCGACCCCTACGTCATCGTCCGCATGGGCAAGCAGAAGTTGAAGACACGAGTCATAAAAAAGACTACCAATCCGGAGTGGAACGATGAACTCACCCTCTCGATTGAAGATCCAGCAGTTCCTGTTAGACTGGAAGTGTATGACAAAGACACATTCATCGATGATGCAATGGGCAATGCGGAGCTGGACATCCGCCCATTGGTGGAGGTTGTCAAGATGAAGATTGAGGGTGTTGCTGACAACACGGTTGTGAAGAAAGTGGTACCCAATAGACAGAACTGCCTAGCTGAAGAGAGCACGATATATATCTCTGAGGGGAAGGTGAAGCAAGACGTGGTTCTCAGACTAAGGGATGTGGAATGCGGGGAAATTGAGCTCCAGCTTCAGTGGGTCGACATCCCAGGTTCTAAGGGTGTATGAACTCTGTACTCTGCCTATTGCTTACAGTCTTGCATAGCTCGCAAGTCCAACTCTAAGTTTATCAGTGGACAATCAAATAAGCAACAGCTTATATTGATGAGATTCTTTTACTGTCCTTGAGGAGGCAGATACCTCCCAGTGCCTCCTCAATGGCTGTAAAATCATTCTTATGTTGACACAGCAAGTGTCTCGAAGATCCCCCACTAGGTGTTTGGGCAGAGCAAAGTTGTACAATATGTCTGCAAAGTATAGTTTGGTGTTACCCTGTCTGTAGAAAAATAATCAGTGGCAGGGGTTGTAACTATTGAAACTTTGTCTGTCTTTCTTCTTGTACGCCAAAGACCAATGCTATCTGCGATTAATCTTCCTAGCTTTCATGCAAAATTTGATTGTGGATGGTCAGCCAGTTTACATGCAATTTTGCCAGCAATCATGTCATGTTATGTGGAGAACATGTTAGTGCTATTGGTCTCAGCATTGGAATAACTGCAGTCAAGATACACTACAGGACGACCATTTTACTAGTGGTAAATTTAGAGTTTTGAACTAGGAACATCCGAACAGACGAGTATAAGACAGTATGACACCTAACTACTGCAGACACCCTTCACAATATCAAACCCGGGTCAACACATGAGACGGCAGGACAATAAAATCAGTGGTAATACTTAGAAAGTTACCTTCTGTTTCATACGTATCAAATCATACAAATTTTAAGACTGGCCAAATTGTATAAAAAGTTAGTAAATATCTATAACAAACGGTGGCGCTAATTAGCGCGTTGGGAGCTA
CDS Sequence
  • >LOC_Os02g22130.1
    ATGTTGGGGCATCTGGTTGGGCTGGTGAAGGTGCGGGTGGTGAGGGGCGTCAACCTCGCCGTCCGCGACCTCCGCTCCAGCGACCCCTACGTCATCGTCCGCATGGGCAAGCAGAAGTTGAAGACACGAGTCATAAAAAAGACTACCAATCCGGAGTGGAACGATGAACTCACCCTCTCGATTGAAGATCCAGCAGTTCCTGTTAGACTGGAAGTGTATGACAAAGACACATTCATCGATGATGCAATGGGCAATGCGGAGCTGGACATCCGCCCATTGGTGGAGGTTGTCAAGATGAAGATTGAGGGTGTTGCTGACAACACGGTTGTGAAGAAAGTGGTACCCAATAGACAGAACTGCCTAGCTGAAGAGAGCACGATATATATCTCTGAGGGGAAGGTGAAGCAAGACGTGGTTCTCAGACTAAGGGATGTGGAATGCGGGGAAATTGAGCTCCAGCTTCAGTGGGTCGACATCCCAGGTTCTAAGGGTGTATGA
Protein Sequence
  • >LOC_Os02g22130.1
    MLGHLVGLVKVRVVRGVNLAVRDLRSSDPYVIVRMGKQKLKTRVIKKTTNPEWNDELTLSIEDPAVPVRLEVYDKDTFIDDAMGNAELDIRPLVEVVKMKIEGVADNTVVKKVVPNRQNCLAEESTIYISEGKVKQDVVLRLRDVECGEIELQLQWVDIPGSKGV*