Gene Details:
- MSU gene ID: LOC_Os02g20360
- RAPdb gene ID: Os02g0306401
- Gene Symbol: OsNAAT1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- In the present study, we identified six rice NAAT genes (OsNAAT1-6) by screening a cDNA library made from Fe-deficient rice roots and by searching databases.
- Northern blot and RT-PCR analysis showed that OsNAAT1, but not OsNAAT2-6, was strongly up-regulated by Fe deficiency, both in roots and shoots.
- Promoter-GUS analysis revealed that OsNAAT1 was expressed in companion and pericycle cells adjacent to the protoxylem of Fe-sufficient roots.
- OsNAAT1 expression was also observed in the companion cells of Fe-sufficient shoots, and was clearly induced in all the cells of Fe-deficient leaves.
- Meanwhile, application of sufficient doses of Fe and Cd in solution culture increased RE of CAL1, OsNRAMP5, OsNRAMP1, OsIRT1, and OsNAAT1 in roots, whereas expression level of OsHMA3 was decreased.
Function-related keywords:
Literature:
- Identification and localisation of the rice nicotianamine aminotransferase gene OsNAAT1 expression suggests the site of phytosiderophore synthesis in rice . DOI: 10.1007/s11103-007-9262-8 ; PMID: 18034312
- A receptor-like protein RMC is involved in regulation of iron acquisition in rice . DOI: 10.1093/jxb/ert290 ; PMID: 24014863
- Comparative transcriptome profile analysis of rice varieties with different tolerance to zinc deficiency . DOI: 10.1111/plb.13227 ; PMID: 33296551
- Effects of Fe and Mn cations on Cd uptake by rice plant in hydroponic culture experiment . DOI: 10.1371/journal.pone.0243174 ; PMID: 33301482
Related News:
Gene Resources:
- NCBI ID: AB206814
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os02g20360.1
AGGCGCGCATGCATGCTTCATGCTGCTGTGCCCCACCCGAGTCCGTGTCCCACACCCGTAGAATCTCCTACAAATATAGCGGCACTAGCTATCCGACGCGCACCACCACCACCTCCTCCTCTGCACCGGAATTCACCAACAAAAAACAGAGCACGGCCATGGCACCGACGACGGCGGCGGCGGCGGCGAGCAGCAACGGCGGCGGCGAGAGCGACGGCAGCAGCAAGGAGTGGAGGCTGACGGCGCCGACGAGGGGCGGCGCGATGGCGGCGGCGGGGGACAAGATGAGCATCCGGGCGGTGCGGTACAAGATCAGCGCCAGCGTCGACGACCGCGGCCCGCGCCCCGTCCTGCCGCTCGCCCACGGCGACCCCTCCGTGTTCCCCGAGTTCCGCACCGCCGCCGAGGCCGAGGACGCCGTCGCCGACGCGCTCCGCTCCGGCGACTTCAACTGCTACCCCGCCGGCGTCGGCCTCCCCGCCGCGCGACGTGCTGTGGCAGATCATTTGTCACGCGACCTCCCATACAAGCTATCTTCTGATGACATCTTCCTAACCGCTGGAGGAACTCAGGCCATCGAGGTCGTAATCTCAATCCTTGCCCAACCTGGCACAAACATATTGCTTCCTAGACCAGGCTACCCAAACTATGAAGCTCGAGCCGCGTTCAACAACCTTGAAGTTCGTCACTTTGATCTTATTCCTGAGAAGGGCTGGGAGATTGACCTTAACTCCCTAGAATCTATTGCGGACAAGAACACTACTGCGATAGTCATCATAAATCCCAATAATCCATGCGGGAATGTGTACACTTACGAGCATTTATCCAAGGTGGCAGAGGTAGCAAGGAAGCTTGGGATATTGGTAATTACTGATGAGGTGTATGGTAATTTGGTTTTTGGGAGTTCCCCATTTGTCCCAATGGGTTGCTTTGGGCACATCGTACCAATATTAACCATAGGATCGCTATCAAAGAGGTGGATAGTGCCGGGATGGCGACTTGGTTGGGTAGCAATATGTGACCCCAAGAAGACTCTACAAGAAACCAAGATTGCAACATTAATTACTAATTTCCTTAATGTTTCAACTGATCCAGCAACTTTCATTCAGGGAGCTCTACCGAATATTCTTAAGAATACCAAGGAAGAATTCTTTAAGAGGATAATTGATTTGCTTACGGAAACATCAGATATTTGCTATAGAGGAATAAAGGATATTAAATGCATCACTTGTCCTCACAAGCCCGAAGGATCCATGTTTGTGATGGTGAAATTGAACCTATATCTTTTGGAGGGAATCCATGATGATGTTGATTTTTGTTGCCAACTTGCGAAAGAAGAGTCGGTGATTCTTTGCCCAGGGAGTGTGCTGGGAATGAAGAATTGGGTTCGCATTACTTTTGCTATTGATTCATCTTCTCTCCTGGATGGTCTTGAGAGGATCAAATCCTTCTGCCAAAGGCACAAGAAGAAAAACCCTTTAAATTATATCTAGATTGTACTAGGATTGGAATGATCAGTACTAATTGTGATGTTTGTGCTTTATACCTGTTGTCACCAAAATGGAACTATTAATTTGCTATGAATAAAGCTTACAAATTCATATGTGTCAATGAACTCATCTATAAAAGTTGCACATGTAGTTTACATAGACT - >LOC_Os02g20360.2
AGGCGCGCATGCATGCTTCATGCTGCTGTGCCCCACCCGAGTCCGTGTCCCACACCCGTAGAATCTCCTACAAATATAGCGGCACTAGCTATCCGACGCGCACCACCACCACCTCCTCCTCTGCACCGGAATTCACCAACAAAAAACAGAGCACGGCCATGGCACCGACGACGGCGGCGGCGGCGGCGAGCAGCAACGGCGGCGGCGAGAGCGACGGCAGCAGCAAGGAGTGGAGGCTGACGGCGCCGACGAGGGGCGGCGCGATGGCGGCGGCGGGGGACAAGATGAGCATCCGGGCGGTGCGGTACAAGATCAGCGCCAGCGTCGACGACCGCGGCCCGCGCCCCGTCCTGCCGCTCGCCCACGGCGACCCCTCCGTGTTCCCCGAGTTCCGCACCGCCGCCGAGGCCGAGGACGCCGTCGCCGACGCGCTCCGCTCCGGCGACTTCAACTGCTACCCCGCCGGCGTCGGCCTCCCCGCCGCGCGACGTGCTGTGGCAGATCATTTGTCACGCGACCTCCCATACAAGCTATCTTCTGATGACATCTTCCTAACCGCTGGAGGAACTCAGGCCATCGAGGTCGTAATCTCAATCCTTGCCCAACCTGGCACAAACATATTGCTTCCTAGACCAGGCTACCCAAACTATGAAGCTCGAGCCGCGTTCAACAACCTTGAAGTTCGTCACTTTGATCTTATTCCTGAGAAGGGCTGGGAGATTGACCTTAACTCCCTAGAATCTATTGCGGACAAGAACACTACTGCGATAGTCATCATAAATCCCAATAATCCATGCGGGAATGTGTACACTTACGAGCATTTATCCAAGGTGGCAGAGGTAGCAAGGAAGCTTGGGATATTGGTAATTACTGATGAGGTGTATGGTAATTTGGTTTTTGGGAGTTCCCCATTTGTCCCAATGGGTTGCTTTGGGCACATCGTACCAATATTAACCATAGGATCGCTATCAAAGAGGTGGATAGTGCCGGGATGGCGACTTGGTTGGGTAGCAATATGTGACCCCAAGAAGACTCTACAAGAAACCAAGATTGCAACATTAATTACTAATTTCCTTAATGTTTCAACTGATCCAGCAACTTTCATTCAGGGAGCTCTACCGAATATTCTTAAGAATACCAAGGAAGAATTCTTTAAGAGGATAATTGATTTGCTTACGGAAACATCAGATATTTGCTATAGAGGAATAAAGGATATTAAATGCATCACTTGTCCTCACAAGCCCGAAGGATCCATGTTTGTGATGGTGAAATTGAACCTATATCTTTTGGAGGGAATCCATGATGATGTTGATTTTTGTTGCCAACTTGCGAAAGAAGAGTCGGTGATTCTTTGCCCAGGGAGTGTGCTGGGAATGAAGAATTGGGTTCGCATTACTTTTGCTATTGATTCATCTTCTCTCCTGGATGGTCTTGAGAGGATCAAATCCTTCTGCCAAAGGCACAAGAAGAAAAACCCTTTAAATTATATCTAGATTGTACTAGGATTGGAATGATCAGTACTAATTGTGATGTTTGTGCTTTATACCTGTTGTCACCAAAATGGAACTATTAATTTGCTATGAATAAAGCTTACAAATTCATATGTGTCAATGAACTCATCTATAAAAGTTGCACATGTAGTTTACATAGACT
CDS Sequence
- >LOC_Os02g20360.1
ATGCATGCTTCATGCTGCTGTGCCCCACCCGAGTCCGTGTCCCACACCCGTAGAATCTCCTACAAATATAGCGGCACTAGCTATCCGACGCGCACCACCACCACCTCCTCCTCTGCACCGGAATTCACCAACAAAAAACAGAGCACGGCCATGGCACCGACGACGGCGGCGGCGGCGGCGAGCAGCAACGGCGGCGGCGAGAGCGACGGCAGCAGCAAGGAGTGGAGGCTGACGGCGCCGACGAGGGGCGGCGCGATGGCGGCGGCGGGGGACAAGATGAGCATCCGGGCGGTGCGGTACAAGATCAGCGCCAGCGTCGACGACCGCGGCCCGCGCCCCGTCCTGCCGCTCGCCCACGGCGACCCCTCCGTGTTCCCCGAGTTCCGCACCGCCGCCGAGGCCGAGGACGCCGTCGCCGACGCGCTCCGCTCCGGCGACTTCAACTGCTACCCCGCCGGCGTCGGCCTCCCCGCCGCGCGACGTGCTGTGGCAGATCATTTGTCACGCGACCTCCCATACAAGCTATCTTCTGATGACATCTTCCTAACCGCTGGAGGAACTCAGGCCATCGAGGTCGTAATCTCAATCCTTGCCCAACCTGGCACAAACATATTGCTTCCTAGACCAGGCTACCCAAACTATGAAGCTCGAGCCGCGTTCAACAACCTTGAAGTTCGTCACTTTGATCTTATTCCTGAGAAGGGCTGGGAGATTGACCTTAACTCCCTAGAATCTATTGCGGACAAGAACACTACTGCGATAGTCATCATAAATCCCAATAATCCATGCGGGAATGTGTACACTTACGAGCATTTATCCAAGGTGGCAGAGGTAGCAAGGAAGCTTGGGATATTGGTAATTACTGATGAGGTGTATGGTAATTTGGTTTTTGGGAGTTCCCCATTTGTCCCAATGGGTTGCTTTGGGCACATCGTACCAATATTAACCATAGGATCGCTATCAAAGAGGTGGATAGTGCCGGGATGGCGACTTGGTTGGGTAGCAATATGTGACCCCAAGAAGACTCTACAAGAAACCAAGATTGCAACATTAATTACTAATTTCCTTAATGTTTCAACTGATCCAGCAACTTTCATTCAGGGAGCTCTACCGAATATTCTTAAGAATACCAAGGAAGAATTCTTTAAGAGGATAATTGATTTGCTTACGGAAACATCAGATATTTGCTATAGAGGAATAAAGGATATTAAATGCATCACTTGTCCTCACAAGCCCGAAGGATCCATGTTTGTGATGGTGAAATTGAACCTATATCTTTTGGAGGGAATCCATGATGATGTTGATTTTTGTTGCCAACTTGCGAAAGAAGAGTCGGTGATTCTTTGCCCAGGGAGTGTGCTGGGAATGAAGAATTGGGTTCGCATTACTTTTGCTATTGATTCATCTTCTCTCCTGGATGGTCTTGAGAGGATCAAATCCTTCTGCCAAAGGCACAAGAAGAAAAACCCTTTAAATTATATCTAG - >LOC_Os02g20360.2
ATGCATGCTTCATGCTGCTGTGCCCCACCCGAGTCCGTGTCCCACACCCGTAGAATCTCCTACAAATATAGCGGCACTAGCTATCCGACGCGCACCACCACCACCTCCTCCTCTGCACCGGAATTCACCAACAAAAAACAGAGCACGGCCATGGCACCGACGACGGCGGCGGCGGCGGCGAGCAGCAACGGCGGCGGCGAGAGCGACGGCAGCAGCAAGGAGTGGAGGCTGACGGCGCCGACGAGGGGCGGCGCGATGGCGGCGGCGGGGGACAAGATGAGCATCCGGGCGGTGCGGTACAAGATCAGCGCCAGCGTCGACGACCGCGGCCCGCGCCCCGTCCTGCCGCTCGCCCACGGCGACCCCTCCGTGTTCCCCGAGTTCCGCACCGCCGCCGAGGCCGAGGACGCCGTCGCCGACGCGCTCCGCTCCGGCGACTTCAACTGCTACCCCGCCGGCGTCGGCCTCCCCGCCGCGCGACGTGCTGTGGCAGATCATTTGTCACGCGACCTCCCATACAAGCTATCTTCTGATGACATCTTCCTAACCGCTGGAGGAACTCAGGCCATCGAGGTCGTAATCTCAATCCTTGCCCAACCTGGCACAAACATATTGCTTCCTAGACCAGGCTACCCAAACTATGAAGCTCGAGCCGCGTTCAACAACCTTGAAGTTCGTCACTTTGATCTTATTCCTGAGAAGGGCTGGGAGATTGACCTTAACTCCCTAGAATCTATTGCGGACAAGAACACTACTGCGATAGTCATCATAAATCCCAATAATCCATGCGGGAATGTGTACACTTACGAGCATTTATCCAAGGTGGCAGAGGTAGCAAGGAAGCTTGGGATATTGGTAATTACTGATGAGGTGTATGGTAATTTGGTTTTTGGGAGTTCCCCATTTGTCCCAATGGGTTGCTTTGGGCACATCGTACCAATATTAACCATAGGATCGCTATCAAAGAGGTGGATAGTGCCGGGATGGCGACTTGGTTGGGTAGCAATATGTGACCCCAAGAAGACTCTACAAGAAACCAAGATTGCAACATTAATTACTAATTTCCTTAATGTTTCAACTGATCCAGCAACTTTCATTCAGGGAGCTCTACCGAATATTCTTAAGAATACCAAGGAAGAATTCTTTAAGAGGATAATTGATTTGCTTACGGAAACATCAGATATTTGCTATAGAGGAATAAAGGATATTAAATGCATCACTTGTCCTCACAAGCCCGAAGGATCCATGTTTGTGATGGTGAAATTGAACCTATATCTTTTGGAGGGAATCCATGATGATGTTGATTTTTGTTGCCAACTTGCGAAAGAAGAGTCGGTGATTCTTTGCCCAGGGAGTGTGCTGGGAATGAAGAATTGGGTTCGCATTACTTTTGCTATTGATTCATCTTCTCTCCTGGATGGTCTTGAGAGGATCAAATCCTTCTGCCAAAGGCACAAGAAGAAAAACCCTTTAAATTATATCTAG
Protein Sequence
- >LOC_Os02g20360.1
MHASCCCAPPESVSHTRRISYKYSGTSYPTRTTTTSSSAPEFTNKKQSTAMAPTTAAAAASSNGGGESDGSSKEWRLTAPTRGGAMAAAGDKMSIRAVRYKISASVDDRGPRPVLPLAHGDPSVFPEFRTAAEAEDAVADALRSGDFNCYPAGVGLPAARRAVADHLSRDLPYKLSSDDIFLTAGGTQAIEVVISILAQPGTNILLPRPGYPNYEARAAFNNLEVRHFDLIPEKGWEIDLNSLESIADKNTTAIVIINPNNPCGNVYTYEHLSKVAEVARKLGILVITDEVYGNLVFGSSPFVPMGCFGHIVPILTIGSLSKRWIVPGWRLGWVAICDPKKTLQETKIATLITNFLNVSTDPATFIQGALPNILKNTKEEFFKRIIDLLTETSDICYRGIKDIKCITCPHKPEGSMFVMVKLNLYLLEGIHDDVDFCCQLAKEESVILCPGSVLGMKNWVRITFAIDSSSLLDGLERIKSFCQRHKKKNPLNYI* - >LOC_Os02g20360.2
MHASCCCAPPESVSHTRRISYKYSGTSYPTRTTTTSSSAPEFTNKKQSTAMAPTTAAAAASSNGGGESDGSSKEWRLTAPTRGGAMAAAGDKMSIRAVRYKISASVDDRGPRPVLPLAHGDPSVFPEFRTAAEAEDAVADALRSGDFNCYPAGVGLPAARRAVADHLSRDLPYKLSSDDIFLTAGGTQAIEVVISILAQPGTNILLPRPGYPNYEARAAFNNLEVRHFDLIPEKGWEIDLNSLESIADKNTTAIVIINPNNPCGNVYTYEHLSKVAEVARKLGILVITDEVYGNLVFGSSPFVPMGCFGHIVPILTIGSLSKRWIVPGWRLGWVAICDPKKTLQETKIATLITNFLNVSTDPATFIQGALPNILKNTKEEFFKRIIDLLTETSDICYRGIKDIKCITCPHKPEGSMFVMVKLNLYLLEGIHDDVDFCCQLAKEESVILCPGSVLGMKNWVRITFAIDSSSLLDGLERIKSFCQRHKKKNPLNYI*