Gene Details:
- MSU gene ID: LOC_Os02g17230
- RAPdb gene ID: Os02g0272200
- Gene Symbol: OsYUC12
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- OsYUC12 is one of three IAA biosynthesis genes we previously reported as expressed during early rice grain development, correlating with a large increase in IAA content of the grain.
- The analysis shows a brief peak of OsYUC12 expression early in endosperm development.
- Meta-analysis of microarray data, confirmed by quantitative expression analysis, revealed that OsYUC12 is coexpressed with OsIAA29, which encodes an unusual AUX/IAA transcription factor previously reported as poorly expressed.
Function-related keywords:
- grain , development , transcription-factor , iaa , endosperm , endosperm-development , IAA , IAA-biosynthesis
Literature:
- Auxin and Cell Wall Invertase Related Signaling during Rice Grain Development . DOI: 10.3390/plants3010095 ; PMID: 27135493
- sparse inflorescence1 encodes a monocot-specific YUCCA-like gene required for vegetative and reproductive development in maize . DOI: 10.1073/pnas.0805596105 ; PMID: 18799737
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os02g17230.1
ATGGAGGAGGTGGTTGTTCTCATCATCGGTGCGGGGCCGGCAGGCCTAGCGACGGCAGCATGCCTCACATTGCAACATGTCGCCTATGCCATTATTGAGCGTGAGTCATGCACCGCATCGTTATGGCGCCACCGTACCTATGACCGCCTCAAATTGCACCTCGCCAAGGAATTCTGCGAGTTGCCACACATGGCGTATCCCTCTGGCACGCCGACATACGTCCCCAGGGAGAGTTTTGTGGAATACCTAGACAGCTACACTGACCGATTTGGGATCCAACCAAGGTACGATACCTCTGTCGAGTCAGCAACATATGATCAAGGAAAGAAGCATTGGGCTGTGCTAGCACAGGACACTGACACCGGTGTTGTAGCAAGACTCACTGCACGGTTCCTCATCATGGCCACCGGTGAGAAAAGCGCAGCAAGCATTCCACTAGTCCCTGGCCTCGCCGGGTTCGAGGGAGAAGCTATCCACTCATCAGCGTACAAATCCGGGAATGGCTATACTGGGAAGAGTGTGCTTGTTGTTGGTGCCGGGAACTCTGGCATGGAGATCGCCTACGACCTTGCCACACATGGCGCCCACACCTCCATAGTTGTTCGCAGCCCGGTACACATAATGACAAAAGAACTAATACGTTTTGGGATGACAATGGTGCAAAATCTAGGCCTATCAGTGACAATTGTGGACCCTCTTCTTGTAATGGCAGCAAAATTAATTTTTTGGGACTTGTCAAAGCATGGAATTATGAGGCCTAAAATGGGCCCTCTCTTACTGAAGTCACAAACTGGCAAATCTGCTGTCATTGATGTCGGCACTGCAAAATTAATCACTAGAGGAGTTATCGACGTGCTCGAAGGAATATTGAAGATAAATGCAAACAATGTTGAATTTCATTGTGGGAGGCAAATTCCATTTGATGCCATTGTGTTTGCCACGGGCTACAAAAGCACAGTTAATACATGGCTAAAGAATGGTGAAAGCATGTTTAGAAATGATGGTTTTCCCAAGAAAAAATTTCCAAATCATTGGAGAGGTGAAAATGGGCTCTATTGTGCTGGGTTTGCAAGGAGAGGATTGGTCAGTATTGCCATGGATGCCAAGAATATTGTTGATGACATCAGAGCCACCATGTATCAAGTGTCTTGCTAA
CDS Sequence
- >LOC_Os02g17230.1
ATGGAGGAGGTGGTTGTTCTCATCATCGGTGCGGGGCCGGCAGGCCTAGCGACGGCAGCATGCCTCACATTGCAACATGTCGCCTATGCCATTATTGAGCGTGAGTCATGCACCGCATCGTTATGGCGCCACCGTACCTATGACCGCCTCAAATTGCACCTCGCCAAGGAATTCTGCGAGTTGCCACACATGGCGTATCCCTCTGGCACGCCGACATACGTCCCCAGGGAGAGTTTTGTGGAATACCTAGACAGCTACACTGACCGATTTGGGATCCAACCAAGGTACGATACCTCTGTCGAGTCAGCAACATATGATCAAGGAAAGAAGCATTGGGCTGTGCTAGCACAGGACACTGACACCGGTGTTGTAGCAAGACTCACTGCACGGTTCCTCATCATGGCCACCGGTGAGAAAAGCGCAGCAAGCATTCCACTAGTCCCTGGCCTCGCCGGGTTCGAGGGAGAAGCTATCCACTCATCAGCGTACAAATCCGGGAATGGCTATACTGGGAAGAGTGTGCTTGTTGTTGGTGCCGGGAACTCTGGCATGGAGATCGCCTACGACCTTGCCACACATGGCGCCCACACCTCCATAGTTGTTCGCAGCCCGGTACACATAATGACAAAAGAACTAATACGTTTTGGGATGACAATGGTGCAAAATCTAGGCCTATCAGTGACAATTGTGGACCCTCTTCTTGTAATGGCAGCAAAATTAATTTTTTGGGACTTGTCAAAGCATGGAATTATGAGGCCTAAAATGGGCCCTCTCTTACTGAAGTCACAAACTGGCAAATCTGCTGTCATTGATGTCGGCACTGCAAAATTAATCACTAGAGGAGTTATCGACGTGCTCGAAGGAATATTGAAGATAAATGCAAACAATGTTGAATTTCATTGTGGGAGGCAAATTCCATTTGATGCCATTGTGTTTGCCACGGGCTACAAAAGCACAGTTAATACATGGCTAAAGAATGGTGAAAGCATGTTTAGAAATGATGGTTTTCCCAAGAAAAAATTTCCAAATCATTGGAGAGGTGAAAATGGGCTCTATTGTGCTGGGTTTGCAAGGAGAGGATTGGTCAGTATTGCCATGGATGCCAAGAATATTGTTGATGACATCAGAGCCACCATGTATCAAGTGTCTTGCTAA
Protein Sequence
- >LOC_Os02g17230.1
MEEVVVLIIGAGPAGLATAACLTLQHVAYAIIERESCTASLWRHRTYDRLKLHLAKEFCELPHMAYPSGTPTYVPRESFVEYLDSYTDRFGIQPRYDTSVESATYDQGKKHWAVLAQDTDTGVVARLTARFLIMATGEKSAASIPLVPGLAGFEGEAIHSSAYKSGNGYTGKSVLVVGAGNSGMEIAYDLATHGAHTSIVVRSPVHIMTKELIRFGMTMVQNLGLSVTIVDPLLVMAAKLIFWDLSKHGIMRPKMGPLLLKSQTGKSAVIDVGTAKLITRGVIDVLEGILKINANNVEFHCGRQIPFDAIVFATGYKSTVNTWLKNGESMFRNDGFPKKKFPNHWRGENGLYCAGFARRGLVSIAMDAKNIVDDIRATMYQVSC*