Information report for Docs1
Gene Details
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Functional Descriptions
- Docs1 mRNA was expressed in all tissues including roots, leaf blades and sheaths, and flowers.
- In this work, we report on defective in outer cell layer specification 1 (Docs1), which is involved in the specification of outer cell layers in rice roots.
- Docs1 was isolated by map-based cloning using a mutant (c68) defective in the outer cell layers of primary roots.
- Immunostaining with an anti-Docs1 antibody showed that Docs1 was localized at the epidermis and exodermis, depending on the root region.
- These results suggest that Docs1 might directly or indirectly regulate multiple genes involved in the proper development of root outer cell layers in rice.
- All these observations add new insights into the Docs1 gene function in gravitropic responses at several stages of plant development.
- Root cone angle is enlarged in Docs1 LRR-RLK mutants in rice.
- Besides the aluminum sensitivity phenotype, both Docs1 mutants shared also several root phenotypes described previously: less root hairs and mixed identities of the outer cell layers.
- Moreover, our new results suggest that Docs1 could also play a role in root cap development.
- We hypothesized these Docs1 root phenotypes may affect gravity responses.
- Furthermore, at adult stage, the root gravitropic set angle of Docs1 mutants was also affected since Docs1 mutant plants displayed larger root cone angles.
- The c68 (Docs1-1) mutant possessed a nonsense mutation in the C-terminal part of the Docs1 kinase domain.
Functional Keywords
- leaf , root , flower , primary-root , sheath , gravitropic-response , development , aluminum , Kinase , root-hair , plant-development
Literature and News
Gene Resources
- UniProt: Q6EUS5
- EMBL: AB625452, AK120541, AP014958
- AlphaFoldDB: Q6EUS5
- EnsemblPlants: Os02t0236100-01
- Gramene: Os02t0236100-01
- KEGG: osa:4328829
- Orthologous matrix: HGCKDLT
- InterPro: IPR000719, IPR008271, IPR011009
- PANTHER: PTHR48006, PTHR48006:SF90
- SUPFAM: SSF52058, SSF56112
- PROSITE: PS00107, PS00108, PS50011
- Gene3D: 1.10.510.10, 3.30.200.20, 3.80.10.10
- OrthoDB: Q6EUS5
- SWISS-MODEL: Q6EUS5
- eggNOG: ENOG502QU0U
Sequences
cDNA Sequence
- >LOC_Os02g14120.1
AGTATTATACTCGCGCAGGCGCCCATGGCCGCCAAGCCCGAGCTCCTGCTGCAGCGTAGCCCACCTCAAGCCACCGCCTCCGCCTCCGCCGCCGCTGCTGCGCTGCGCCCGCGCGGCCTCCTCCTCGCCCTCCCCGGCGTCGCCGTCGGACTCCTCTCATGGCGGGGCCCCGCGCCCTCGCCGTGGCGGCGGCGGTGGTGGTCGCCGCGTGGGCCGTCGCCGCCGCCGGGGACCCGCCGCTGTCGCCCAAGGGGCTCAACTACGAAGTGGCGGCGCTGATGGCGGTGAAGAGCAGGATGCGGGACGAGAAGGGGGTGATGGGAGGGTGGGACATCAACTCCGTCGACCCGTGCACCTGGTCCATGGTCGCCTGCTCCCCCGACGGATTCGTCGTCTCGCTGCAGATGGCGAACAACGGATTGGCCGGGACGCTGTCGCCGAGCATCGGGAACCTCAGCCACCTGCAGACAATGTTACTACAGAATAACATGATATCAGGTGGCATTCCTCCAGAGATTGGGAAGTTGACCAATCTGAAAGCTCTTGATCTTTCTGGTAACCAGTTTGTTGGTGAAATCCCAAGTTCTCTAGGGCGGCTGACTGAATTAAACTATCTGCGCCTAGATAAGAACAACTTGTCTGGACAGATCCCTGAAGATGTCGCAAAGCTTCCAGGTCTCACATTCCTTGATTTATCATCCAATAATTTGAGCGGCCCGGTTCCAAAAATCTATGCACATGACTACAGTATTGCAGGAAACAGGTTCCTTTGCAATTCATCAATTATGCATGGTTGCAAAGATCTCACAGTATTAACTAATGAATCAACAATTTCTAGCCCGTCGAAAAAAACAAACAGCCATCATCAACTAGCTCTGGCAATTTCATTAAGCATCATCTGTGCCACAGTATTTGTTCTGTTTGTCATTTGTTGGCTAAAATATTGCAGATGGCGCTTGCCTTTTGCTTCTGCTGACCAAGATCTTGAAATTGAATTGGGCCATCTAAAGCACTTCTCATTTCACGAGCTTCAGAGTGCAACTGACAATTTCAACTCAAAGAACATATTAGGTCAAGGTGGCTTTGGTGTTGTTTATAAAGGCTGTCTGAGAAATGGAGCTTTGGTGGCTGTAAAGAGACTAAAAGATCCTGATATTACTGGTGAAGTTCAATTTCAGACAGAAGTGGAGTTGATTGGTCTAGCTGTGCACAGGAACCTTTTGCGGTTATATGGATTCTGCATGACCTCAAAAGAAAGGTTGCTTGTATATCCATATATGCCAAATGGCAGTGTTGCTGATCGCTTGAGAGATTACCATCATGGAAAACCATCTCTTGATTGGAGCAAGCGTATGCGGATTGCTGTTGGGGCAGCCAGGGGACTGCTGTATCTTCACGAACAATGCAATCCTAAAATCATTCACAGGGATGTTAAAGCAGCTAACATTTTGCTTGATGAAAGTTTTGAAGCAATTGTTGGGGATTTTGGATTGGCAAAACTTCTTGACCGACAAGAATCACATGTTACTACTGCAGTTAGGGGCACTATTGGACATATTGCTCCAGAGTATTTATCAACAGGACAGTCTTCAGAAAAGACCGATGTTTATGGGTTTGGTATTCTCTTGTTGGAACTGATCACTGGGCCTAAAACCTTGAGCAATGGGCACGCGCAATCTCAGAAGGGAATGATTCTAGATTGGGTTAGAGAAGTCAAGGAAGAAAATAAACTGGATAAACTGGTTGACAGGGATCTGAAATATTCATTTGATTTCGCCGAGTTGGAGTGTTCTGTTGACGTAATTCTGCAATGCACTCAGACCAATCCCATTTTGCGTCCCAAGATGTCGGAAGTCCTTAATGCCCTTGAAGCTAATGTCACCCTGCCAGAGAACGGCATCGACTTGAATAGAGAAGTGCCTCCCTATGGAGGATCTTGCAGTTTCTCAGTAAGGCATGAGGATCCTCATGATTCATCATCCTTCATAATAGAGCCAATTGAGCTATCTGGTCCCAGATGATCACAATTGTACATCAGGGGGGAGAACCACAAACAAAAGGATGACAATTGTACAAAAACGTGTATAGTCTGGATGTAGTTTTACTTGGAATCTGCAAGGAGTTTGCTGGTGTTGCAAATGCCTCACGATCCAATCTCTAACTGCTAGGTAGATCGGTCATTTCTGGTCGTGTTGGCGTATGCACTGTACAGTGCAAATCAGTATGCTACCCATCCTACAATATGTTCTCGAGAAAATTACATTGCATCTTGCATGTTTTTCTCAGTTACAAGAATCAGTATGAAAGAGCCCAAAAGCACGAATCAATATGAAATGTTCTTCGCTGAGACGGCTTATTCCTGCGAGTCTACATGCTAAACTCTCATGCTACGTTTACCAAAAAATATTCAGCAGAATACGCCTGCCTCGTCTTGATATCACATACAAAAAAAGCAGCAAATTTTATCTAAATTCTCATGGTCGGTCGGCAGGGCCACACATGACTTGTCAAAATGCTCAGCTCATTTGCATTTATTCTCTTTCACATATCTCTGTTTCTGAGGTGACCTGCCAGGCTGCCACAGGCATAACATCTGACGATTGAAATAACAGGATCGGCATCTATAGCTCTCAAAATTGGGTAGGTTTCTAGTTCTCTCCTCCATACAGGGAAAATCCGAAGTTGGAGAAACACCAGCATGTTCACTGGATTATTTCTCTAGTACAACCATCTTAAAGGTCAATAGACCACCCCCCAAAAAAAAAACGCCGCCGCTTGCAAGCCTCATTTCATTGGCCGAAGAGGGAAGAGGAAGTAGCTTCATTTCGTTTTAGTGACCTCATGAATAGCATTAGCCAAATACGCCACATTTCCTGTTGTTACACCAGCCATGCTGA
CDS Sequence
- >LOC_Os02g14120.1
ATGGCGGGGCCCCGCGCCCTCGCCGTGGCGGCGGCGGTGGTGGTCGCCGCGTGGGCCGTCGCCGCCGCCGGGGACCCGCCGCTGTCGCCCAAGGGGCTCAACTACGAAGTGGCGGCGCTGATGGCGGTGAAGAGCAGGATGCGGGACGAGAAGGGGGTGATGGGAGGGTGGGACATCAACTCCGTCGACCCGTGCACCTGGTCCATGGTCGCCTGCTCCCCCGACGGATTCGTCGTCTCGCTGCAGATGGCGAACAACGGATTGGCCGGGACGCTGTCGCCGAGCATCGGGAACCTCAGCCACCTGCAGACAATGTTACTACAGAATAACATGATATCAGGTGGCATTCCTCCAGAGATTGGGAAGTTGACCAATCTGAAAGCTCTTGATCTTTCTGGTAACCAGTTTGTTGGTGAAATCCCAAGTTCTCTAGGGCGGCTGACTGAATTAAACTATCTGCGCCTAGATAAGAACAACTTGTCTGGACAGATCCCTGAAGATGTCGCAAAGCTTCCAGGTCTCACATTCCTTGATTTATCATCCAATAATTTGAGCGGCCCGGTTCCAAAAATCTATGCACATGACTACAGTATTGCAGGAAACAGGTTCCTTTGCAATTCATCAATTATGCATGGTTGCAAAGATCTCACAGTATTAACTAATGAATCAACAATTTCTAGCCCGTCGAAAAAAACAAACAGCCATCATCAACTAGCTCTGGCAATTTCATTAAGCATCATCTGTGCCACAGTATTTGTTCTGTTTGTCATTTGTTGGCTAAAATATTGCAGATGGCGCTTGCCTTTTGCTTCTGCTGACCAAGATCTTGAAATTGAATTGGGCCATCTAAAGCACTTCTCATTTCACGAGCTTCAGAGTGCAACTGACAATTTCAACTCAAAGAACATATTAGGTCAAGGTGGCTTTGGTGTTGTTTATAAAGGCTGTCTGAGAAATGGAGCTTTGGTGGCTGTAAAGAGACTAAAAGATCCTGATATTACTGGTGAAGTTCAATTTCAGACAGAAGTGGAGTTGATTGGTCTAGCTGTGCACAGGAACCTTTTGCGGTTATATGGATTCTGCATGACCTCAAAAGAAAGGTTGCTTGTATATCCATATATGCCAAATGGCAGTGTTGCTGATCGCTTGAGAGATTACCATCATGGAAAACCATCTCTTGATTGGAGCAAGCGTATGCGGATTGCTGTTGGGGCAGCCAGGGGACTGCTGTATCTTCACGAACAATGCAATCCTAAAATCATTCACAGGGATGTTAAAGCAGCTAACATTTTGCTTGATGAAAGTTTTGAAGCAATTGTTGGGGATTTTGGATTGGCAAAACTTCTTGACCGACAAGAATCACATGTTACTACTGCAGTTAGGGGCACTATTGGACATATTGCTCCAGAGTATTTATCAACAGGACAGTCTTCAGAAAAGACCGATGTTTATGGGTTTGGTATTCTCTTGTTGGAACTGATCACTGGGCCTAAAACCTTGAGCAATGGGCACGCGCAATCTCAGAAGGGAATGATTCTAGATTGGGTTAGAGAAGTCAAGGAAGAAAATAAACTGGATAAACTGGTTGACAGGGATCTGAAATATTCATTTGATTTCGCCGAGTTGGAGTGTTCTGTTGACGTAATTCTGCAATGCACTCAGACCAATCCCATTTTGCGTCCCAAGATGTCGGAAGTCCTTAATGCCCTTGAAGCTAATGTCACCCTGCCAGAGAACGGCATCGACTTGAATAGAGAAGTGCCTCCCTATGGAGGATCTTGCAGTTTCTCAGTAAGGCATGAGGATCCTCATGATTCATCATCCTTCATAATAGAGCCAATTGAGCTATCTGGTCCCAGATGA
Protein Sequence
- >LOC_Os02g14120.1
MAGPRALAVAAAVVVAAWAVAAAGDPPLSPKGLNYEVAALMAVKSRMRDEKGVMGGWDINSVDPCTWSMVACSPDGFVVSLQMANNGLAGTLSPSIGNLSHLQTMLLQNNMISGGIPPEIGKLTNLKALDLSGNQFVGEIPSSLGRLTELNYLRLDKNNLSGQIPEDVAKLPGLTFLDLSSNNLSGPVPKIYAHDYSIAGNRFLCNSSIMHGCKDLTVLTNESTISSPSKKTNSHHQLALAISLSIICATVFVLFVICWLKYCRWRLPFASADQDLEIELGHLKHFSFHELQSATDNFNSKNILGQGGFGVVYKGCLRNGALVAVKRLKDPDITGEVQFQTEVELIGLAVHRNLLRLYGFCMTSKERLLVYPYMPNGSVADRLRDYHHGKPSLDWSKRMRIAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDRQESHVTTAVRGTIGHIAPEYLSTGQSSEKTDVYGFGILLLELITGPKTLSNGHAQSQKGMILDWVREVKEENKLDKLVDRDLKYSFDFAELECSVDVILQCTQTNPILRPKMSEVLNALEANVTLPENGIDLNREVPPYGGSCSFSVRHEDPHDSSSFIIEPIELSGPR*