Gene Details:
- MSU gene ID: LOC_Os02g12790
- RAPdb gene ID: Os02g0220400
- Gene Symbol: Cga1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Strong overexpression of Cga1 produces dark green, semidwarf plants with reduced tillering, whereas RNA interference knockdown results in reduced chlorophyll and increased tillering.
- In rice (Oryza sativa), the CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR1 (Cga1) shows increased expression following light, nitrogen, and cytokinin treatments, while darkness and gibberellin reduce expression.
- Coexpression, microarray, and real-time expression analyses demonstrate a correlation between Cga1 expression and the expression of important nucleus-encoded, chloroplast-localized genes.
- Constitutive Cga1 overexpression increases both chloroplast biogenesis and starch production but also results in delayed senescence and reduced grain filling.
- Growing the transgenic lines under different nitrogen regimes indicates potential agricultural applications for Cga1, including manipulation of biomass, chlorophyll/chloroplast content, and harvest index.
- These results indicate a conserved mechanism by which Cga1 regulates chloroplast development in higher plants.
Function-related keywords:
- tiller , transcription-factor , chloroplast , senescence , dwarf , biomass , starch , tillering , cytokinin , grain-filling , grain , gibberellin , nitrogen
Literature:
- Rice cytokinin GATA transcription Factor1 regulates chloroplast development and plant architecture . DOI: 10.1104/pp.113.217265 ; PMID: 23548780
Related News:
Gene Resources:
- NCBI ID: AK099607
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os02g12790.1
ATCACACACATGGCATCCTTCTAAATCTTCCTAGGCCCGAGCTGGAGAGGGATTGATGGCAGCTCTTGGCTCCTCTTGCTTCCCTTTTATTAAAAGGACATGCCTCTCTCCACTGTCCATGATCATCCCCTGGGCCCTTGTAAATTGCCCCTCCAACAGCAGATCCTCCGGCCCCTAGGCAGCCACACTACTCTCCTCTCCACATCTCTATCTTCCTTATATGCAATATCCCTGATACAGTTGTTTGTACTGCCTGAAGCTACACCAATATAATTCCCAGATCTCCTCAGCTAAGCTATAGCTTCTCTCCCATCTCTTTCCTCCTCCTCCTCTCTGATATGTCTACTATCTACATGAGCCAGCTACCTGCTACTCTCCCTCTAATGGAGGGGGATCAGGATCAGGGGCTCTACCCAGCCTTCCATAGAGCAAAGGACCCTCCTATCTTGTTCCCTTTCATGATCGACAGCGCCGTCGAGCACCAAGGGCAAATCTATGGAGATCAGGGCTTGAGGAGGCAGCAGGTTTTGGGTGAATCCAATCAACAGTTCAATGATCACATGATGATGGGCGGATCAGATGTCTTCCTCACACCGTCTCCGTTCCGACCAACCATCCAAAGCATCGGCAGCGACATGATCCAGCGATCATCTTATGATCCATACGATATCGAGAGTAACAACAAGCAGCATGCCAATGGATCAACCAGCAAGTGGATGTCGACGCCGCCAATGAAGATGAGGATCATAAGGAAGGGGGCGGCAACCGATCCTGAGGGCGGGGCGGTGAGAAAGCCAAGGAGAAGAGCACAAGCGCACCAGGATGAGAGCCAGCAACAACTGCAGCAAGCTTTGGGTGTCGTTAGAGTGTGCTCGGACTGCAACACCACCAAGACCCCCTTGTGGAGAAGTGGTCCTTGTGGCCCCAAGTCCCTTTGCAACGCGTGTGGCATCAGGCAAAGGAAGGCGCGGCGGGCGATGGCCGCTGCTGCCAACGGCGGAGCGGCGGTGGCGCCGGCAAAGAGCGTGGCCGCGGCGCCGGTGAACAATAAGCCGGCGGCGAAGAAGGAGAAGAGGGCGGCGGACGTCGACCGGTCGCTGCCGTTCAAGAAACGGTGCAAGATGGTCGATCACGTTGCTGCTGCCGTCGCTGCCACCAAGCCCACGGCTGCTGGAGAAGTAGTGGCCGCCGCTCCGAAGGACCAAGATCACGTCATCGTCGTCGGTGGCGAGAACGCCGCCGCCACCTCCATGCCGGCACAGAACCCGATATCCAAGGCGGCGGCGACCGCCGCTGCCGCCGCCGCCTCTCCGGCGTTCTTCCACGGCCTCCCTCGCGACGAGATCACCGACGCCGCCATGCTGCTCATGACCCTATCCTGTGGCCTCGTCCACAGCTAGCTAGCTAGCTGATCAAAACTAGCTAGCTACTAGTACCGTTAATTTGATGAGGGCAACAACCAGAGTACTATGTACCACTACTAGCAATATTTTGTGTGTGCCTTGTGATCTTTTGTTGTTTTGTGTTGTTGAGGAGATCACTAGATCAGGATGAAGGAGAGATAGTGATCACATGTCTAAGGACGAAATAAACGAGAACAAACTCGCTAGCTAGCTACTAGCCGGGATCAGGATTATATTTACTATCAGCTGAGTGATTAGCTTGAGGTTTTTTTTTATTACCCCCTACTGCTGCTAATTAATCAAGCCACTTTTGTATCATGTTTCTTAGTTCTTTCTTCTTGTATCTGTTATGTTTGGAGCTAATAATAATATGGAGATTGGAGAGAA
CDS Sequence
- >LOC_Os02g12790.1
ATGTCTACTATCTACATGAGCCAGCTACCTGCTACTCTCCCTCTAATGGAGGGGGATCAGGATCAGGGGCTCTACCCAGCCTTCCATAGAGCAAAGGACCCTCCTATCTTGTTCCCTTTCATGATCGACAGCGCCGTCGAGCACCAAGGGCAAATCTATGGAGATCAGGGCTTGAGGAGGCAGCAGGTTTTGGGTGAATCCAATCAACAGTTCAATGATCACATGATGATGGGCGGATCAGATGTCTTCCTCACACCGTCTCCGTTCCGACCAACCATCCAAAGCATCGGCAGCGACATGATCCAGCGATCATCTTATGATCCATACGATATCGAGAGTAACAACAAGCAGCATGCCAATGGATCAACCAGCAAGTGGATGTCGACGCCGCCAATGAAGATGAGGATCATAAGGAAGGGGGCGGCAACCGATCCTGAGGGCGGGGCGGTGAGAAAGCCAAGGAGAAGAGCACAAGCGCACCAGGATGAGAGCCAGCAACAACTGCAGCAAGCTTTGGGTGTCGTTAGAGTGTGCTCGGACTGCAACACCACCAAGACCCCCTTGTGGAGAAGTGGTCCTTGTGGCCCCAAGTCCCTTTGCAACGCGTGTGGCATCAGGCAAAGGAAGGCGCGGCGGGCGATGGCCGCTGCTGCCAACGGCGGAGCGGCGGTGGCGCCGGCAAAGAGCGTGGCCGCGGCGCCGGTGAACAATAAGCCGGCGGCGAAGAAGGAGAAGAGGGCGGCGGACGTCGACCGGTCGCTGCCGTTCAAGAAACGGTGCAAGATGGTCGATCACGTTGCTGCTGCCGTCGCTGCCACCAAGCCCACGGCTGCTGGAGAAGTAGTGGCCGCCGCTCCGAAGGACCAAGATCACGTCATCGTCGTCGGTGGCGAGAACGCCGCCGCCACCTCCATGCCGGCACAGAACCCGATATCCAAGGCGGCGGCGACCGCCGCTGCCGCCGCCGCCTCTCCGGCGTTCTTCCACGGCCTCCCTCGCGACGAGATCACCGACGCCGCCATGCTGCTCATGACCCTATCCTGTGGCCTCGTCCACAGCTAG
Protein Sequence
- >LOC_Os02g12790.1
MSTIYMSQLPATLPLMEGDQDQGLYPAFHRAKDPPILFPFMIDSAVEHQGQIYGDQGLRRQQVLGESNQQFNDHMMMGGSDVFLTPSPFRPTIQSIGSDMIQRSSYDPYDIESNNKQHANGSTSKWMSTPPMKMRIIRKGAATDPEGGAVRKPRRRAQAHQDESQQQLQQALGVVRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAMAAAANGGAAVAPAKSVAAAPVNNKPAAKKEKRAADVDRSLPFKKRCKMVDHVAAAVAATKPTAAGEVVAAAPKDQDHVIVVGGENAAATSMPAQNPISKAAATAAAAAASPAFFHGLPRDEITDAAMLLMTLSCGLVHS*