Information report for TMS5
Gene Details
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Functional Descriptions
- Development of Commercial Thermo-sensitive Genic Male Sterile Rice Accelerates Hybrid Rice Breeding Using the CRISPR/Cas9-mediated TMS5 Editing System.
- RESULTS: Here, thermo-sensitive genic male sterility (TGMS) was induced by employing the CRISPR/Cas9 gene editing technology to modify the gene TMS5.
- Generation of a new thermo-sensitive genic male sterile rice line by targeted mutagenesis of TMS5 gene through CRISPR/Cas9 system.
- In the present study, a super grain quality line, GXU 47, was used to generate a new TGMS line with specific mutations in a major TGMS gene TMS5 generated with CRISPR/Cas9-mediated genome editing in order to improve the rice quality of two-line hybrids.
- CRISPR/Cas9-Induced Mutagenesis of TMS5 Confers Thermosensitive Genic Male Sterility by Influencing Protein Expression in Rice (Oryza sativa L.).
- The present study results prove that it is feasible and efficient to generate an excellent mutant line with CRISPR/Cas9, which provides a novel molecular mechanism of male sterility caused by the mutation of TMS5.
Functional Keywords
- development , sterile , breeding , sterility , male-sterility , grain , grain-quality , quality
Literature and News
- RNase Z(S1) processes UbL40 mRNAs and controls thermosensitive genic male sterility in rice . DOI: 10.1038/ncomms5884 ; PMID: 25208476
- Development of Commercial Thermo-sensitive Genic Male Sterile Rice Accelerates Hybrid Rice Breeding Using the CRISPR/Cas9-mediated TMS5 Editing System . DOI: 10.1038/srep37395 ; PMID: 27874087
- Generation of a new thermo-sensitive genic male sterile rice line by targeted mutagenesis of TMS5 gene through CRISPR/Cas9 system . DOI: 10.1186/s12870-019-1715-0 ; PMID: 30894127
- CRISPR/Cas9-Induced Mutagenesis of TMS5 Confers Thermosensitive Genic Male Sterility by Influencing Protein Expression in Rice (Oryza sativa L.) . DOI: 10.3390/ijms23158354 ; PMID: 35955484
Gene Resources
- UniProt: Q6H8B1
- EMBL: AP014958
- AlphaFoldDB: Q6H8B1
- EnsemblPlants: Os02t0214300-01
- Gramene: Os02t0214300-01
- KEGG: osa:4328713
- Orthologous matrix: LTHFSMR
- InterPro: IPR001279, IPR036866
- PANTHER: PTHR46504, PTHR46504:SF2
- SUPFAM: SSF56281
- Gene3D: 3.60.15.10
- OrthoDB: Q6H8B1
- SWISS-MODEL: Q6H8B1
- Conserved Domain Database: cd16272
- eggNOG: ENOG502QVD0
Sequences
cDNA Sequence
- >LOC_Os02g12290.1
ATGGCGAACAGCGGCAAGTCATCGCCGGCGGCGACCTCCACCACCGCGCCGCCACCGGGTCGGCCGAAGGCGAAGGCGCCGCCCCTCACCGTCGAGGGCTACCCCGTGGAGGGCATCTCCATCGGCGGGCAGGAGACCTGCGTCATCTTCCCGACGCTGAGCGCCGCCTTCGACATCGGCCGGTGCCCGCAGCGCGCCGTCTCGCAGGAGTTCCTCTTCATCTCCCACGCCCACCTCGACCACATCGGCGGCCTCCCCATGTACGTCGCCACCCGGGGCCTCTACCGGCAGCGCCCGCCCACCATCTTCATCCCCGCCTGCCTCAGGGACCCCGTGGAGCGCCTCTTCGAGCTCCACCGCTCCATGGACCAGTCCGAGCTCAGCCACAACCTCGTCCCCCTCGAGATTGGTCAGGAGCACGAGCTCAGGAGGGACCTCAAGGTGAAGGCCTTCAAGACCTACCACGCCATTCCCAGCCAGGGGTATGTGATATACACGGTGAAGCAAAAGCTCAAGCCAGAGTATCTTGGCCTCCCTGGGAGCGAGATCAAGCAGCTGAAGCTGTCAGGTGTGGAGATTACGAATACATTGACGGTGCCTGAGATTGCTTTTACCGGAGATACGATGGCAGATTTCATTCTTGATCCTGATAATGCGGATGTTTTGAAGGCGAAAATTCTTGTAGTGGAGAGTACTTTTGTTGATGACTCTGTTACAATTGAGCATGCAAGAGAATATGGGCACACCCATCTGTTTGAGATACTGAATCAGTGTGACAAACTTGAAAACAAAGCTATTCTGCTAATCCACTTTTCTGCTCGTTATACCGCAGAGGAAATTGATATAGCAATCAATAAGTTGCCACCCTCTTTCAGAAGTAGAGTTCATGCATTGAAGGAAGGTTTCTGA
CDS Sequence
- >LOC_Os02g12290.1
ATGGCGAACAGCGGCAAGTCATCGCCGGCGGCGACCTCCACCACCGCGCCGCCACCGGGTCGGCCGAAGGCGAAGGCGCCGCCCCTCACCGTCGAGGGCTACCCCGTGGAGGGCATCTCCATCGGCGGGCAGGAGACCTGCGTCATCTTCCCGACGCTGAGCGCCGCCTTCGACATCGGCCGGTGCCCGCAGCGCGCCGTCTCGCAGGAGTTCCTCTTCATCTCCCACGCCCACCTCGACCACATCGGCGGCCTCCCCATGTACGTCGCCACCCGGGGCCTCTACCGGCAGCGCCCGCCCACCATCTTCATCCCCGCCTGCCTCAGGGACCCCGTGGAGCGCCTCTTCGAGCTCCACCGCTCCATGGACCAGTCCGAGCTCAGCCACAACCTCGTCCCCCTCGAGATTGGTCAGGAGCACGAGCTCAGGAGGGACCTCAAGGTGAAGGCCTTCAAGACCTACCACGCCATTCCCAGCCAGGGGTATGTGATATACACGGTGAAGCAAAAGCTCAAGCCAGAGTATCTTGGCCTCCCTGGGAGCGAGATCAAGCAGCTGAAGCTGTCAGGTGTGGAGATTACGAATACATTGACGGTGCCTGAGATTGCTTTTACCGGAGATACGATGGCAGATTTCATTCTTGATCCTGATAATGCGGATGTTTTGAAGGCGAAAATTCTTGTAGTGGAGAGTACTTTTGTTGATGACTCTGTTACAATTGAGCATGCAAGAGAATATGGGCACACCCATCTGTTTGAGATACTGAATCAGTGTGACAAACTTGAAAACAAAGCTATTCTGCTAATCCACTTTTCTGCTCGTTATACCGCAGAGGAAATTGATATAGCAATCAATAAGTTGCCACCCTCTTTCAGAAGTAGAGTTCATGCATTGAAGGAAGGTTTCTGA
Protein Sequence
- >LOC_Os02g12290.1
MANSGKSSPAATSTTAPPPGRPKAKAPPLTVEGYPVEGISIGGQETCVIFPTLSAAFDIGRCPQRAVSQEFLFISHAHLDHIGGLPMYVATRGLYRQRPPTIFIPACLRDPVERLFELHRSMDQSELSHNLVPLEIGQEHELRRDLKVKAFKTYHAIPSQGYVIYTVKQKLKPEYLGLPGSEIKQLKLSGVEITNTLTVPEIAFTGDTMADFILDPDNADVLKAKILVVESTFVDDSVTIEHAREYGHTHLFEILNQCDKLENKAILLIHFSARYTAEEIDIAINKLPPSFRSRVHALKEGF*