Information report for OsRPT4
Gene Details
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Functional Descriptions
- Since yeast two-hybrid results indicated that OsRAA1 interacts with OsRPT4, which is a known cell cycle regulator, we investigated the cell cycle in transgenic roots to unveil the mechanism of OsRAA1 regulation in root growth.
Functional Keywords
Literature and News
- Identification of the 19S regulatory particle subunits from the rice 26S proteasome . DOI: 10.1046/j.1432-1033.2002.02792.x ; PMID: 11874462
- Rice ROOT ARCHITECTURE ASSOCIATED1 binds the proteasome subunit RPT4 and is degraded in a D-box and proteasome-dependent manner . DOI: 10.1104/pp.108.125294 ; PMID: 18701670
Gene Resources
- UniProt: Q6H718
- EMBL: AP004812, AP004869, AP008208
- EnsemblPlants: Os02t0199900-01
- Gramene: Os02t0199900-01
- KEGG: dosa:Os02g0199900, osa:4328642
- Orthologous matrix: YSIMHIL
- InterPro: IPR003593, IPR003959, IPR003960
- PANTHER: PTHR23073
- SUPFAM: SSF52540
- PROSITE: PS00674
- Gene3D: 1.10.8.60, 2.40.50.140, 3.40.50.300
- OrthoDB: Q6H718
- SWISS-MODEL: Q6H718
Sequences
cDNA Sequence
- >LOC_Os02g10640.1
GTTAGGATATTTACGCAACCGAGAGAGAGAAAGGAGCTCGTGCGCTACTCTTCTTGCGACAGAAGCAAAAGGCGGCGAAGAGAGAGAGAGAGAGAGAGAGAGCGAGATCGCCGGAGATGGCCGACGGGGAGGACGCCGCCGCCGCCCGCCGCCGCGCCTCCGTGACGGAGTACCGGAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCAGCACCGTGAGGGAAAACCTAAAAAATGCTAAGAAGGACTTTACAAAGACCGAAGATGACTTAAAATCCCTGCAAAGTGTTGGGCAGATCATCGGAGAGGTTCTCCGCCCTCTTGATAATGAACGTTTTATTGTTAAGGCTAGCAGTGGTCCCAGATATGTGGTTGGTTGCCGGAGCAAAGTGGACAAGGAGAAATTGACTTCGGGAACTCGTGTTGTTCTTGACATGACAACACTGACAATCATGCGCACACTTCCACGTGAGGTGGACCCTGTGGTTTACAACATGCTTCATGAAGACCCTGGTAATGTCAGTTACTCTGCTGTTGGTGGTCTGTCTGATCAGATTAGAGAGCTCAGGGAGTCCATCGAATTGCCCTTAATGAACCCTGAGCTCTTTCTTCGTGTTGGGATCAAGCCCCCCAAGGGTGTTCTACTCTATGGTCCACCAGGAACTGGTAAGACACTATTGGCGAGGGCTATTGCCAGTAACATCGATGCCAACTTTTTGAAGATTGTTTCAAGTGCTATAATTGACAAGTACATTGGAGAGAGTGCCCGCTTGATTAGGGAAATGTTTGGCTATGCACGTGATCATCAACCATGCATAATCTTCATGGACGAAATCGATGCCATTGGTGGGCGGCGGTTCAGTGAAGGAACTAGTGCTGATCGCGAGATCCAGCGCACACTGATGGAACTGCTAAATCAGTTAGATGGATTTGATGAACTTGGAAAGGTGAAAATGATCATGGCTACCAATAGACCTGATGTTCTGGACCCTGCGCTACTGCGTCCTGGACGTCTAGACAGGAAGATTGAGATTCCGCTACCAAATGAGCAAGCAAGAATGGAAGTTCTTAAAATCCATGCTGCTGGTATTGCCAAGCATGGAGAAATTGATTATGAGGCAGTTGTTAAACTGGCTGAGGGCTTCAATGGGGCTGATCTTCGCAACGTCTGCACTGAAGCGGGTATGGCTGCAATTCGTGCTGAACGGGACTACGTTGTCCATGAGGACTTCATGAAGGCTGTCAGGAAGCTGAACGACGCCAAGAAGCTGGAATCCAGCGCCCACTACAGTGCAGACTTCGGCAAAGAGTAAGGTGCAAGATTCTGATCCTGTATTCGATCTTCTACCATGCCGGGAGTTCTCCGCCATGGTGCAAAAGCAACAGAGAAATCGGTTTTTCACCGTCAGGCTTCTATTCTGCACTGCAAGCTGAAGCCATTTGTCATGTGTGCAATCAAAGAGCCATGAATGGTTGTCAAGCTTATCTCTGGGACTGGAGAAACATACCGAGAACTTGCAAATTTTATAACTGATGCTTTTGCCTCTGTTTCACTCCGTTTTTTGAGTCTCACCTTGTGTCAGTACTACTGTGTAGTCTTAGTTTTGAGCAGTTGCATGTACTTTTGACACCATGCTTGGTAAAGAATAGCAAAATGGTATCTTGATTCAGCTTCCAGACCCCCATCTGGTGTGGGAATGCATCTCAATTCCTGTGAAATTCGTGC
CDS Sequence
- >LOC_Os02g10640.1
ATGGCCGACGGGGAGGACGCCGCCGCCGCCCGCCGCCGCGCCTCCGTGACGGAGTACCGGAAGAAGCTGCTCAACTGCAGGGAGCTCGAGTCGCGCGTCAGCACCGTGAGGGAAAACCTAAAAAATGCTAAGAAGGACTTTACAAAGACCGAAGATGACTTAAAATCCCTGCAAAGTGTTGGGCAGATCATCGGAGAGGTTCTCCGCCCTCTTGATAATGAACGTTTTATTGTTAAGGCTAGCAGTGGTCCCAGATATGTGGTTGGTTGCCGGAGCAAAGTGGACAAGGAGAAATTGACTTCGGGAACTCGTGTTGTTCTTGACATGACAACACTGACAATCATGCGCACACTTCCACGTGAGGTGGACCCTGTGGTTTACAACATGCTTCATGAAGACCCTGGTAATGTCAGTTACTCTGCTGTTGGTGGTCTGTCTGATCAGATTAGAGAGCTCAGGGAGTCCATCGAATTGCCCTTAATGAACCCTGAGCTCTTTCTTCGTGTTGGGATCAAGCCCCCCAAGGGTGTTCTACTCTATGGTCCACCAGGAACTGGTAAGACACTATTGGCGAGGGCTATTGCCAGTAACATCGATGCCAACTTTTTGAAGATTGTTTCAAGTGCTATAATTGACAAGTACATTGGAGAGAGTGCCCGCTTGATTAGGGAAATGTTTGGCTATGCACGTGATCATCAACCATGCATAATCTTCATGGACGAAATCGATGCCATTGGTGGGCGGCGGTTCAGTGAAGGAACTAGTGCTGATCGCGAGATCCAGCGCACACTGATGGAACTGCTAAATCAGTTAGATGGATTTGATGAACTTGGAAAGGTGAAAATGATCATGGCTACCAATAGACCTGATGTTCTGGACCCTGCGCTACTGCGTCCTGGACGTCTAGACAGGAAGATTGAGATTCCGCTACCAAATGAGCAAGCAAGAATGGAAGTTCTTAAAATCCATGCTGCTGGTATTGCCAAGCATGGAGAAATTGATTATGAGGCAGTTGTTAAACTGGCTGAGGGCTTCAATGGGGCTGATCTTCGCAACGTCTGCACTGAAGCGGGTATGGCTGCAATTCGTGCTGAACGGGACTACGTTGTCCATGAGGACTTCATGAAGGCTGTCAGGAAGCTGAACGACGCCAAGAAGCTGGAATCCAGCGCCCACTACAGTGCAGACTTCGGCAAAGAGTAA
Protein Sequence
- >LOC_Os02g10640.1
MADGEDAAAARRRASVTEYRKKLLNCRELESRVSTVRENLKNAKKDFTKTEDDLKSLQSVGQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDFMKAVRKLNDAKKLESSAHYSADFGKE*