Gene Details:

Functional Descriptions:

  • To understand the molecular mechanisms of crown root formation, we isolated a rice mutant defective in crown root emergence designated as OsCAND1 (named after the Arabidopsis homologous gene AtCAND1).
  • The defect of visible crown root in the OsCAND1 mutant is the result of cessation of the G2/M cell cycle transition in the crown root meristem.
  • During crown root primordium development, the expression of OsCAND1 is confined to the root cap after the establishment of fundamental organization.
  • Exogenous auxin application can partially rescue the defect of crown root development in OsCAND1.
  • Taken together, these data show that OsCAND1 is involved in auxin signaling to maintain the G2/M cell cycle transition in crown root meristem and, consequently, the emergence of crown root.
  • OsCAND1 is required for crown root emergence in rice.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os02g07120.1
    AATCCCCCATCGGCGTCAGGGCCGTGACGGCAAAAAATACAGCGAGCTCTCCAAGCCCTAGCCGCCGCCCGCCCGCCTCCCCTTCCCGACCCCTCGCCGCCGGCGAGCCGGCCGCGTGGAGTCGCCCCCCCGCCGCGGTTCCCGCCGTCCGCTACGTTGTCTCGGGCCCCGGAGTGCTGGGATCGCGCCGCGTGCTGGACTCACTGGACTGGACTGGAGACGCCGCCCTCCGCTCGACTAGCCCCCACCCCCCACCGGCGTCGTCGTCGTCGTCAAGGGCTCACCATCGCTAGCAGGGCAACAGTGATTAGTTCCGCGGAAAAGGACTTTTGGATACGGTTTAGCTAAAATGGCAAACATGAACATAACCACCATCTTGGAGAAGATGACAGGGAAAGATAAGGACTACAGATATATGGCAACTTCAGATTTGCTTAGCGAATTGAACAAAGAGGGCTTCAAAGCTGACCAAGACATCGAGCCAAAGTTGACTACTACCGTTCTTCAACAACTGGAAGATGCTTCAGGAGATGTCTCTGGTTTAGCTGTTAAATGCTTGGCTCCACTTGTCAAGAAGGTTGGTGAGGATAGGGTGGTGGAGATGACCAACATTCTTTGTGATAAGTTACTCAATGGAAAGGACCAACATCGAGACACTGCTAGTATTGCTCTGAAGACAATCATTGTGGAAGTTACGACAACATCACTTGCTGAAAAGATTTTGGTGTCTCTTGCCCCACAGCTAATCAAGGGCGCCACTGCTGGAAAAAGTGCGGAAGTGAAATGCGAGTGCCTTGATATATTGGGGGATGTACTTCATAGATTTGGCAACTTGATCACAAAAGATCATGATAGTATGCTCACTGCCTTGTTATCCCAGTTGAGCTCTAACCAAGCAAGTGTTAGGAAAAAGTCTATTTCTTGCATTGCATCACTTGCTGCATGTCTGTCTGATGATTTATTAGCCAAGGCAACTTTTGAGGTTGTCCAGTTGCTTAAAAATAGAAGTGCAAAGTCTGAAATTGCCCGAACAAATATCCAGATGATTGGCGCTCTAAGTCGCTCGGTTGGATACCGTTTTGGGCCACACCTTGCTGAAGCTGTTCCTTTGCTCATAAACTATTGTACAAGTGCATCGGAAAATGATGAAGAGCTCCGTGAATACAGCTTGCAGGCCCTCGAGAGTTTTATGCTGAGGTGTCCAAGAGATATATCTCCATATTGTGAGGGTATTTTAAATCTTGCATTGGAATATATAAGCTATGATCCAAATTTCACTGATAGCATGGAGGAGGACACTGATGATGAGGCTCAGGATGAGGAAGATGATGATGAGAGCGCAAATGAATACACAGATGATGAGGATGCAAGCTGGAAAGTCCGGAGGGCTTCAGCAAAGTGCTTATCTGCAATTATAGTATCTCGTCCTGAAATGTTGTCTAAGATGTATCTGGAGGCTTGTCCAAAGTTAATCGAACGGTTTAGGGAAAGAGAGGAAAATGTAAAGATGGACATCTTTAACACATTTATTGAGTTGTTACGCCAAACTGGTAACATGACAAAAGGACAAGGTGACATTGATGAGTCTAGCCCTAGATGGTTGCTGAAACAAGAAGTACCTAAGGTTGTCAAATCCATCAATAGGCAGTTGCGTGAAAAATCAATCAAGACAAAGGTTGGAGCATTCTCTGTATTGAAGGAGCTTGTTGTTGTACTGCCAGACTGTCTTGCTGATCATATTGGGTCACTTGTTCCTGGGATTGAGAAGGCTTTGAATGATAAGTCATCTACCTCCAACCTGAAGATTGAAGCCCTTGTATTTACAAGACTTGTTATGGCTTCACATTCCCCAGCTGTGTTTCATCCATACATACAGGCCCTTTCTGGCCCAATATTGTCTGCTATTGGAGACAGATATTACAAAGTCACCGCTGAGGCTTTAAGAGTCTGCGGAGAGCTAGTTCGTGTACTTCGTCCAAATTTTGAGGCACGCACTCTAGATTACAGGCCATATATTGGTCCAATCTATAAGGCTATCTTGGCCCGCTTGGCAAATCAGGATCAGGATCAGGAAGTTAAAGAGTGTGCCATATCTTGCATGAGCCTTGTGGTATTCACGTTTGGTGATGGTCTCCAAAGGGAACTGCCGGCATGCCTTCCCATTCTTGTTGATAGAATGGGTAATGAAATAACTAGACTTACAGCAGTTAAGGCGTTTGCAGTGATTGCTAAATCACCTCTTCGCATTGATCTTTCGTGTGTCCTAGACCATGTCATTTCTGAGCTCACGGCTTTCCTTCGAAAGGCAAACAGAGCTCTAAGGCAGGCTACATTGGGAACACTAAATTCTCTTGTTGTTGCGTATGGTGGTCAAATTGGATCCTCTTATGAAACTATTATTGCTGAACTTTCTACGCTCATTAGTGACATGGATTTGCACATGACTGCTCTTGCGCTGGAACTTTGTTGCACGATCATGGTCGATAGAAAATCCATCCAAAATGTTGGTCTTGCAGTGAGGTACAAGGTTTTGCCCCAGGCCCTTATTTTGATCAGGAGTGCTCTCTTGCAAGGGCAGGCACTACAGGCACTGCAGAGATTTTTTGCTTCACTGGTCCAGTCTGCAAATACAAGCTTTGACACTTTGTTGGATTCTCTTATTTCTACTGCTAAACCATCGCAGTCAGGTGGACTTGCCAAACAAGCATTGTCTTCCATTGCACAGTGTGTTGCTGTGTTGTGCTTAGCAGCTGGGGATCAGAAGTGTGCCTCAACTATTGAAATGCTTAAAGGCATTTTAAAAGATGACAGCACTACTAATTCTGCTAAACAGCACATGGCCTTGTTATGTTTGGGAGAAATTGGAAGAAGGAAGGACCTCAGCAATCATGCTCAAATTGAGAATATTGTCATTGAGTCATTTCAGTCACCTTTTGAGGAGATCAAATCTGCAGCGTCATATGCTCTCGGAAACATTGCTGTTGGAAATTTATCGAAGTATTTGCCTTTTATCTTGAATCAGATTGACAACCAACAGAAGAAACAGTATCTATTGCTTCATTCACTGAAAGAGGTAATTGCACGGCAGTCTGTTGACCATACTGGCCAGAGTGAGCTCCAGGATTCAAACATTGAGAAGATTTTGGCATTGCTCTTTAATCACTGTGAAAGTGAGGAGGAAGGAGTTCGGAATGTAGTTGCAGAATGCTTAGGCAAAATTGCTCTGATTGAACCTAGGAAATTAATCCCTGCTCTAAAGGAACGCACATCTAGTCCTGCTGCAAACACAAGAGCTACAGTTGCCATTGCTATAAAATATTCAATTGTTGAACGGCCTGGAAAAATAGATGAAATTATGTACTCCGAGATTTCTACCTTCCTGATGTTGATTAAAGACAGTGACAGGCACGTGAGGCGTGCAGCTGTGCTGGCCTTGAGTACAGCTGCCCACAACAAGCCAAATTTGATTAAGGGTCTTCTTCCTGAATTATTGCCTCTTTTGTATGACCAAACTGTTGTTAAGCAAGAATTGATCAGAACAGTTGACCTTGGGCCTTTCAAGCATGTTGTGGACGATGGTCTTGAACTCAGGAAAGCTGCCTTTGAATGTGTGGATACATTGCTGGATAGCTGTCTTGATCAAGTGAACCCATCATCATTTATCGTTCCTTTCCTCTTATCTGGTTTAGGTGATCATTATGATGTAAAAATGCCTTGCCATCTGATTCTCTCAAAGCTAGCAGACAAGTGCCCTTCTGCTGTTCTGGCAGTTTTGGACTCATTAGTTGACCCCATTGAGAAAACTATAAATCACAAACCCAAGGGCGATGCAGTGAAGCAAGAGGTTGATCGCAATGAAGACATGATTCGAAGTGCTCTTCGAGCAATCGCTGCTCTAAGCCGCATAAGTGGTAATGATTACAGCATGAGGTTCAAGAATCTGATGAACAAGATAATGGCCTCACCTCCGCTTGCTGACAAGTACAACTCGGTGCGCAGCGAGTAAGAGCTGATCTTTTTGTATATGGTAGAAAATAGTTGGAGCCGACTTGGTATATGTGCCACTGCCTATTCTGAGGTGAAGATTCAACCCAGCATTGCCCTATATTTTTCTGGTGGAGCTAGTCCGAAACACTGAACGATACAGCTGAGACTAAGAGGTGGTTTGAAAATTTGCGAACACAAATGGCTGGTTGGAAGCTAGACTTTTTTTTTTTGTCTTGTACAAAGTATGGCGGCAATTCACTAGATTCAGTAAAGTTGGATTATATTTTAGCCGTCTTGTGCGTATTTTTTCATTGCGTGGTACTAGTAATTCTTCCAATCTCTAGACGCCGTCCTTTTCCAAGTTTGGTTCAAGCGTGATATTGAAAATTAAAAACTTGAAAATCGAATTAAAAACGATCAATTTTTAACTTGATCGATTTTGTATTTTTTTTCATAAAAATGTTGTATTTCAATGTTCATCTCTGTACCTTCC
CDS Sequence
  • >LOC_Os02g07120.1
    ATGGCAAACATGAACATAACCACCATCTTGGAGAAGATGACAGGGAAAGATAAGGACTACAGATATATGGCAACTTCAGATTTGCTTAGCGAATTGAACAAAGAGGGCTTCAAAGCTGACCAAGACATCGAGCCAAAGTTGACTACTACCGTTCTTCAACAACTGGAAGATGCTTCAGGAGATGTCTCTGGTTTAGCTGTTAAATGCTTGGCTCCACTTGTCAAGAAGGTTGGTGAGGATAGGGTGGTGGAGATGACCAACATTCTTTGTGATAAGTTACTCAATGGAAAGGACCAACATCGAGACACTGCTAGTATTGCTCTGAAGACAATCATTGTGGAAGTTACGACAACATCACTTGCTGAAAAGATTTTGGTGTCTCTTGCCCCACAGCTAATCAAGGGCGCCACTGCTGGAAAAAGTGCGGAAGTGAAATGCGAGTGCCTTGATATATTGGGGGATGTACTTCATAGATTTGGCAACTTGATCACAAAAGATCATGATAGTATGCTCACTGCCTTGTTATCCCAGTTGAGCTCTAACCAAGCAAGTGTTAGGAAAAAGTCTATTTCTTGCATTGCATCACTTGCTGCATGTCTGTCTGATGATTTATTAGCCAAGGCAACTTTTGAGGTTGTCCAGTTGCTTAAAAATAGAAGTGCAAAGTCTGAAATTGCCCGAACAAATATCCAGATGATTGGCGCTCTAAGTCGCTCGGTTGGATACCGTTTTGGGCCACACCTTGCTGAAGCTGTTCCTTTGCTCATAAACTATTGTACAAGTGCATCGGAAAATGATGAAGAGCTCCGTGAATACAGCTTGCAGGCCCTCGAGAGTTTTATGCTGAGGTGTCCAAGAGATATATCTCCATATTGTGAGGGTATTTTAAATCTTGCATTGGAATATATAAGCTATGATCCAAATTTCACTGATAGCATGGAGGAGGACACTGATGATGAGGCTCAGGATGAGGAAGATGATGATGAGAGCGCAAATGAATACACAGATGATGAGGATGCAAGCTGGAAAGTCCGGAGGGCTTCAGCAAAGTGCTTATCTGCAATTATAGTATCTCGTCCTGAAATGTTGTCTAAGATGTATCTGGAGGCTTGTCCAAAGTTAATCGAACGGTTTAGGGAAAGAGAGGAAAATGTAAAGATGGACATCTTTAACACATTTATTGAGTTGTTACGCCAAACTGGTAACATGACAAAAGGACAAGGTGACATTGATGAGTCTAGCCCTAGATGGTTGCTGAAACAAGAAGTACCTAAGGTTGTCAAATCCATCAATAGGCAGTTGCGTGAAAAATCAATCAAGACAAAGGTTGGAGCATTCTCTGTATTGAAGGAGCTTGTTGTTGTACTGCCAGACTGTCTTGCTGATCATATTGGGTCACTTGTTCCTGGGATTGAGAAGGCTTTGAATGATAAGTCATCTACCTCCAACCTGAAGATTGAAGCCCTTGTATTTACAAGACTTGTTATGGCTTCACATTCCCCAGCTGTGTTTCATCCATACATACAGGCCCTTTCTGGCCCAATATTGTCTGCTATTGGAGACAGATATTACAAAGTCACCGCTGAGGCTTTAAGAGTCTGCGGAGAGCTAGTTCGTGTACTTCGTCCAAATTTTGAGGCACGCACTCTAGATTACAGGCCATATATTGGTCCAATCTATAAGGCTATCTTGGCCCGCTTGGCAAATCAGGATCAGGATCAGGAAGTTAAAGAGTGTGCCATATCTTGCATGAGCCTTGTGGTATTCACGTTTGGTGATGGTCTCCAAAGGGAACTGCCGGCATGCCTTCCCATTCTTGTTGATAGAATGGGTAATGAAATAACTAGACTTACAGCAGTTAAGGCGTTTGCAGTGATTGCTAAATCACCTCTTCGCATTGATCTTTCGTGTGTCCTAGACCATGTCATTTCTGAGCTCACGGCTTTCCTTCGAAAGGCAAACAGAGCTCTAAGGCAGGCTACATTGGGAACACTAAATTCTCTTGTTGTTGCGTATGGTGGTCAAATTGGATCCTCTTATGAAACTATTATTGCTGAACTTTCTACGCTCATTAGTGACATGGATTTGCACATGACTGCTCTTGCGCTGGAACTTTGTTGCACGATCATGGTCGATAGAAAATCCATCCAAAATGTTGGTCTTGCAGTGAGGTACAAGGTTTTGCCCCAGGCCCTTATTTTGATCAGGAGTGCTCTCTTGCAAGGGCAGGCACTACAGGCACTGCAGAGATTTTTTGCTTCACTGGTCCAGTCTGCAAATACAAGCTTTGACACTTTGTTGGATTCTCTTATTTCTACTGCTAAACCATCGCAGTCAGGTGGACTTGCCAAACAAGCATTGTCTTCCATTGCACAGTGTGTTGCTGTGTTGTGCTTAGCAGCTGGGGATCAGAAGTGTGCCTCAACTATTGAAATGCTTAAAGGCATTTTAAAAGATGACAGCACTACTAATTCTGCTAAACAGCACATGGCCTTGTTATGTTTGGGAGAAATTGGAAGAAGGAAGGACCTCAGCAATCATGCTCAAATTGAGAATATTGTCATTGAGTCATTTCAGTCACCTTTTGAGGAGATCAAATCTGCAGCGTCATATGCTCTCGGAAACATTGCTGTTGGAAATTTATCGAAGTATTTGCCTTTTATCTTGAATCAGATTGACAACCAACAGAAGAAACAGTATCTATTGCTTCATTCACTGAAAGAGGTAATTGCACGGCAGTCTGTTGACCATACTGGCCAGAGTGAGCTCCAGGATTCAAACATTGAGAAGATTTTGGCATTGCTCTTTAATCACTGTGAAAGTGAGGAGGAAGGAGTTCGGAATGTAGTTGCAGAATGCTTAGGCAAAATTGCTCTGATTGAACCTAGGAAATTAATCCCTGCTCTAAAGGAACGCACATCTAGTCCTGCTGCAAACACAAGAGCTACAGTTGCCATTGCTATAAAATATTCAATTGTTGAACGGCCTGGAAAAATAGATGAAATTATGTACTCCGAGATTTCTACCTTCCTGATGTTGATTAAAGACAGTGACAGGCACGTGAGGCGTGCAGCTGTGCTGGCCTTGAGTACAGCTGCCCACAACAAGCCAAATTTGATTAAGGGTCTTCTTCCTGAATTATTGCCTCTTTTGTATGACCAAACTGTTGTTAAGCAAGAATTGATCAGAACAGTTGACCTTGGGCCTTTCAAGCATGTTGTGGACGATGGTCTTGAACTCAGGAAAGCTGCCTTTGAATGTGTGGATACATTGCTGGATAGCTGTCTTGATCAAGTGAACCCATCATCATTTATCGTTCCTTTCCTCTTATCTGGTTTAGGTGATCATTATGATGTAAAAATGCCTTGCCATCTGATTCTCTCAAAGCTAGCAGACAAGTGCCCTTCTGCTGTTCTGGCAGTTTTGGACTCATTAGTTGACCCCATTGAGAAAACTATAAATCACAAACCCAAGGGCGATGCAGTGAAGCAAGAGGTTGATCGCAATGAAGACATGATTCGAAGTGCTCTTCGAGCAATCGCTGCTCTAAGCCGCATAAGTGGTAATGATTACAGCATGAGGTTCAAGAATCTGATGAACAAGATAATGGCCTCACCTCCGCTTGCTGACAAGTACAACTCGGTGCGCAGCGAGTAA
Protein Sequence
  • >LOC_Os02g07120.1
    MANMNITTILEKMTGKDKDYRYMATSDLLSELNKEGFKADQDIEPKLTTTVLQQLEDASGDVSGLAVKCLAPLVKKVGEDRVVEMTNILCDKLLNGKDQHRDTASIALKTIIVEVTTTSLAEKILVSLAPQLIKGATAGKSAEVKCECLDILGDVLHRFGNLITKDHDSMLTALLSQLSSNQASVRKKSISCIASLAACLSDDLLAKATFEVVQLLKNRSAKSEIARTNIQMIGALSRSVGYRFGPHLAEAVPLLINYCTSASENDEELREYSLQALESFMLRCPRDISPYCEGILNLALEYISYDPNFTDSMEEDTDDEAQDEEDDDESANEYTDDEDASWKVRRASAKCLSAIIVSRPEMLSKMYLEACPKLIERFREREENVKMDIFNTFIELLRQTGNMTKGQGDIDESSPRWLLKQEVPKVVKSINRQLREKSIKTKVGAFSVLKELVVVLPDCLADHIGSLVPGIEKALNDKSSTSNLKIEALVFTRLVMASHSPAVFHPYIQALSGPILSAIGDRYYKVTAEALRVCGELVRVLRPNFEARTLDYRPYIGPIYKAILARLANQDQDQEVKECAISCMSLVVFTFGDGLQRELPACLPILVDRMGNEITRLTAVKAFAVIAKSPLRIDLSCVLDHVISELTAFLRKANRALRQATLGTLNSLVVAYGGQIGSSYETIIAELSTLISDMDLHMTALALELCCTIMVDRKSIQNVGLAVRYKVLPQALILIRSALLQGQALQALQRFFASLVQSANTSFDTLLDSLISTAKPSQSGGLAKQALSSIAQCVAVLCLAAGDQKCASTIEMLKGILKDDSTTNSAKQHMALLCLGEIGRRKDLSNHAQIENIVIESFQSPFEEIKSAASYALGNIAVGNLSKYLPFILNQIDNQQKKQYLLLHSLKEVIARQSVDHTGQSELQDSNIEKILALLFNHCESEEEGVRNVVAECLGKIALIEPRKLIPALKERTSSPAANTRATVAIAIKYSIVERPGKIDEIMYSEISTFLMLIKDSDRHVRRAAVLALSTAAHNKPNLIKGLLPELLPLLYDQTVVKQELIRTVDLGPFKHVVDDGLELRKAAFECVDTLLDSCLDQVNPSSFIVPFLLSGLGDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPIEKTINHKPKGDAVKQEVDRNEDMIRSALRAIAALSRISGNDYSMRFKNLMNKIMASPPLADKYNSVRSE*