Information report for OsCAND1
Gene Details
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Functional Descriptions
- To understand the molecular mechanisms of crown root formation, we isolated a rice mutant defective in crown root emergence designated as OsCAND1 (named after the Arabidopsis homologous gene AtCAND1).
- The defect of visible crown root in the OsCAND1 mutant is the result of cessation of the G2/M cell cycle transition in the crown root meristem.
- During crown root primordium development, the expression of OsCAND1 is confined to the root cap after the establishment of fundamental organization.
- Exogenous auxin application can partially rescue the defect of crown root development in OsCAND1.
- Taken together, these data show that OsCAND1 is involved in auxin signaling to maintain the G2/M cell cycle transition in crown root meristem and, consequently, the emergence of crown root.
- OsCAND1 is required for crown root emergence in rice.
Functional Keywords
- crown-root , root , meristem , auxin , root-development , cell-cycle , crown
Literature and News
Gene Resources
- UniProt: Q6H4V4
- EMBL: AK069128, AP014958
- AlphaFoldDB: Q6H4V4
- EnsemblPlants: Os02t0167700-01
- Gramene: Os02t0167700-01
- KEGG: osa:4328423
- Orthologous matrix: AYIPHFQ
Sequences
cDNA Sequence
- >LOC_Os02g07120.1
AATCCCCCATCGGCGTCAGGGCCGTGACGGCAAAAAATACAGCGAGCTCTCCAAGCCCTAGCCGCCGCCCGCCCGCCTCCCCTTCCCGACCCCTCGCCGCCGGCGAGCCGGCCGCGTGGAGTCGCCCCCCCGCCGCGGTTCCCGCCGTCCGCTACGTTGTCTCGGGCCCCGGAGTGCTGGGATCGCGCCGCGTGCTGGACTCACTGGACTGGACTGGAGACGCCGCCCTCCGCTCGACTAGCCCCCACCCCCCACCGGCGTCGTCGTCGTCGTCAAGGGCTCACCATCGCTAGCAGGGCAACAGTGATTAGTTCCGCGGAAAAGGACTTTTGGATACGGTTTAGCTAAAATGGCAAACATGAACATAACCACCATCTTGGAGAAGATGACAGGGAAAGATAAGGACTACAGATATATGGCAACTTCAGATTTGCTTAGCGAATTGAACAAAGAGGGCTTCAAAGCTGACCAAGACATCGAGCCAAAGTTGACTACTACCGTTCTTCAACAACTGGAAGATGCTTCAGGAGATGTCTCTGGTTTAGCTGTTAAATGCTTGGCTCCACTTGTCAAGAAGGTTGGTGAGGATAGGGTGGTGGAGATGACCAACATTCTTTGTGATAAGTTACTCAATGGAAAGGACCAACATCGAGACACTGCTAGTATTGCTCTGAAGACAATCATTGTGGAAGTTACGACAACATCACTTGCTGAAAAGATTTTGGTGTCTCTTGCCCCACAGCTAATCAAGGGCGCCACTGCTGGAAAAAGTGCGGAAGTGAAATGCGAGTGCCTTGATATATTGGGGGATGTACTTCATAGATTTGGCAACTTGATCACAAAAGATCATGATAGTATGCTCACTGCCTTGTTATCCCAGTTGAGCTCTAACCAAGCAAGTGTTAGGAAAAAGTCTATTTCTTGCATTGCATCACTTGCTGCATGTCTGTCTGATGATTTATTAGCCAAGGCAACTTTTGAGGTTGTCCAGTTGCTTAAAAATAGAAGTGCAAAGTCTGAAATTGCCCGAACAAATATCCAGATGATTGGCGCTCTAAGTCGCTCGGTTGGATACCGTTTTGGGCCACACCTTGCTGAAGCTGTTCCTTTGCTCATAAACTATTGTACAAGTGCATCGGAAAATGATGAAGAGCTCCGTGAATACAGCTTGCAGGCCCTCGAGAGTTTTATGCTGAGGTGTCCAAGAGATATATCTCCATATTGTGAGGGTATTTTAAATCTTGCATTGGAATATATAAGCTATGATCCAAATTTCACTGATAGCATGGAGGAGGACACTGATGATGAGGCTCAGGATGAGGAAGATGATGATGAGAGCGCAAATGAATACACAGATGATGAGGATGCAAGCTGGAAAGTCCGGAGGGCTTCAGCAAAGTGCTTATCTGCAATTATAGTATCTCGTCCTGAAATGTTGTCTAAGATGTATCTGGAGGCTTGTCCAAAGTTAATCGAACGGTTTAGGGAAAGAGAGGAAAATGTAAAGATGGACATCTTTAACACATTTATTGAGTTGTTACGCCAAACTGGTAACATGACAAAAGGACAAGGTGACATTGATGAGTCTAGCCCTAGATGGTTGCTGAAACAAGAAGTACCTAAGGTTGTCAAATCCATCAATAGGCAGTTGCGTGAAAAATCAATCAAGACAAAGGTTGGAGCATTCTCTGTATTGAAGGAGCTTGTTGTTGTACTGCCAGACTGTCTTGCTGATCATATTGGGTCACTTGTTCCTGGGATTGAGAAGGCTTTGAATGATAAGTCATCTACCTCCAACCTGAAGATTGAAGCCCTTGTATTTACAAGACTTGTTATGGCTTCACATTCCCCAGCTGTGTTTCATCCATACATACAGGCCCTTTCTGGCCCAATATTGTCTGCTATTGGAGACAGATATTACAAAGTCACCGCTGAGGCTTTAAGAGTCTGCGGAGAGCTAGTTCGTGTACTTCGTCCAAATTTTGAGGCACGCACTCTAGATTACAGGCCATATATTGGTCCAATCTATAAGGCTATCTTGGCCCGCTTGGCAAATCAGGATCAGGATCAGGAAGTTAAAGAGTGTGCCATATCTTGCATGAGCCTTGTGGTATTCACGTTTGGTGATGGTCTCCAAAGGGAACTGCCGGCATGCCTTCCCATTCTTGTTGATAGAATGGGTAATGAAATAACTAGACTTACAGCAGTTAAGGCGTTTGCAGTGATTGCTAAATCACCTCTTCGCATTGATCTTTCGTGTGTCCTAGACCATGTCATTTCTGAGCTCACGGCTTTCCTTCGAAAGGCAAACAGAGCTCTAAGGCAGGCTACATTGGGAACACTAAATTCTCTTGTTGTTGCGTATGGTGGTCAAATTGGATCCTCTTATGAAACTATTATTGCTGAACTTTCTACGCTCATTAGTGACATGGATTTGCACATGACTGCTCTTGCGCTGGAACTTTGTTGCACGATCATGGTCGATAGAAAATCCATCCAAAATGTTGGTCTTGCAGTGAGGTACAAGGTTTTGCCCCAGGCCCTTATTTTGATCAGGAGTGCTCTCTTGCAAGGGCAGGCACTACAGGCACTGCAGAGATTTTTTGCTTCACTGGTCCAGTCTGCAAATACAAGCTTTGACACTTTGTTGGATTCTCTTATTTCTACTGCTAAACCATCGCAGTCAGGTGGACTTGCCAAACAAGCATTGTCTTCCATTGCACAGTGTGTTGCTGTGTTGTGCTTAGCAGCTGGGGATCAGAAGTGTGCCTCAACTATTGAAATGCTTAAAGGCATTTTAAAAGATGACAGCACTACTAATTCTGCTAAACAGCACATGGCCTTGTTATGTTTGGGAGAAATTGGAAGAAGGAAGGACCTCAGCAATCATGCTCAAATTGAGAATATTGTCATTGAGTCATTTCAGTCACCTTTTGAGGAGATCAAATCTGCAGCGTCATATGCTCTCGGAAACATTGCTGTTGGAAATTTATCGAAGTATTTGCCTTTTATCTTGAATCAGATTGACAACCAACAGAAGAAACAGTATCTATTGCTTCATTCACTGAAAGAGGTAATTGCACGGCAGTCTGTTGACCATACTGGCCAGAGTGAGCTCCAGGATTCAAACATTGAGAAGATTTTGGCATTGCTCTTTAATCACTGTGAAAGTGAGGAGGAAGGAGTTCGGAATGTAGTTGCAGAATGCTTAGGCAAAATTGCTCTGATTGAACCTAGGAAATTAATCCCTGCTCTAAAGGAACGCACATCTAGTCCTGCTGCAAACACAAGAGCTACAGTTGCCATTGCTATAAAATATTCAATTGTTGAACGGCCTGGAAAAATAGATGAAATTATGTACTCCGAGATTTCTACCTTCCTGATGTTGATTAAAGACAGTGACAGGCACGTGAGGCGTGCAGCTGTGCTGGCCTTGAGTACAGCTGCCCACAACAAGCCAAATTTGATTAAGGGTCTTCTTCCTGAATTATTGCCTCTTTTGTATGACCAAACTGTTGTTAAGCAAGAATTGATCAGAACAGTTGACCTTGGGCCTTTCAAGCATGTTGTGGACGATGGTCTTGAACTCAGGAAAGCTGCCTTTGAATGTGTGGATACATTGCTGGATAGCTGTCTTGATCAAGTGAACCCATCATCATTTATCGTTCCTTTCCTCTTATCTGGTTTAGGTGATCATTATGATGTAAAAATGCCTTGCCATCTGATTCTCTCAAAGCTAGCAGACAAGTGCCCTTCTGCTGTTCTGGCAGTTTTGGACTCATTAGTTGACCCCATTGAGAAAACTATAAATCACAAACCCAAGGGCGATGCAGTGAAGCAAGAGGTTGATCGCAATGAAGACATGATTCGAAGTGCTCTTCGAGCAATCGCTGCTCTAAGCCGCATAAGTGGTAATGATTACAGCATGAGGTTCAAGAATCTGATGAACAAGATAATGGCCTCACCTCCGCTTGCTGACAAGTACAACTCGGTGCGCAGCGAGTAAGAGCTGATCTTTTTGTATATGGTAGAAAATAGTTGGAGCCGACTTGGTATATGTGCCACTGCCTATTCTGAGGTGAAGATTCAACCCAGCATTGCCCTATATTTTTCTGGTGGAGCTAGTCCGAAACACTGAACGATACAGCTGAGACTAAGAGGTGGTTTGAAAATTTGCGAACACAAATGGCTGGTTGGAAGCTAGACTTTTTTTTTTTGTCTTGTACAAAGTATGGCGGCAATTCACTAGATTCAGTAAAGTTGGATTATATTTTAGCCGTCTTGTGCGTATTTTTTCATTGCGTGGTACTAGTAATTCTTCCAATCTCTAGACGCCGTCCTTTTCCAAGTTTGGTTCAAGCGTGATATTGAAAATTAAAAACTTGAAAATCGAATTAAAAACGATCAATTTTTAACTTGATCGATTTTGTATTTTTTTTCATAAAAATGTTGTATTTCAATGTTCATCTCTGTACCTTCC
CDS Sequence
- >LOC_Os02g07120.1
ATGGCAAACATGAACATAACCACCATCTTGGAGAAGATGACAGGGAAAGATAAGGACTACAGATATATGGCAACTTCAGATTTGCTTAGCGAATTGAACAAAGAGGGCTTCAAAGCTGACCAAGACATCGAGCCAAAGTTGACTACTACCGTTCTTCAACAACTGGAAGATGCTTCAGGAGATGTCTCTGGTTTAGCTGTTAAATGCTTGGCTCCACTTGTCAAGAAGGTTGGTGAGGATAGGGTGGTGGAGATGACCAACATTCTTTGTGATAAGTTACTCAATGGAAAGGACCAACATCGAGACACTGCTAGTATTGCTCTGAAGACAATCATTGTGGAAGTTACGACAACATCACTTGCTGAAAAGATTTTGGTGTCTCTTGCCCCACAGCTAATCAAGGGCGCCACTGCTGGAAAAAGTGCGGAAGTGAAATGCGAGTGCCTTGATATATTGGGGGATGTACTTCATAGATTTGGCAACTTGATCACAAAAGATCATGATAGTATGCTCACTGCCTTGTTATCCCAGTTGAGCTCTAACCAAGCAAGTGTTAGGAAAAAGTCTATTTCTTGCATTGCATCACTTGCTGCATGTCTGTCTGATGATTTATTAGCCAAGGCAACTTTTGAGGTTGTCCAGTTGCTTAAAAATAGAAGTGCAAAGTCTGAAATTGCCCGAACAAATATCCAGATGATTGGCGCTCTAAGTCGCTCGGTTGGATACCGTTTTGGGCCACACCTTGCTGAAGCTGTTCCTTTGCTCATAAACTATTGTACAAGTGCATCGGAAAATGATGAAGAGCTCCGTGAATACAGCTTGCAGGCCCTCGAGAGTTTTATGCTGAGGTGTCCAAGAGATATATCTCCATATTGTGAGGGTATTTTAAATCTTGCATTGGAATATATAAGCTATGATCCAAATTTCACTGATAGCATGGAGGAGGACACTGATGATGAGGCTCAGGATGAGGAAGATGATGATGAGAGCGCAAATGAATACACAGATGATGAGGATGCAAGCTGGAAAGTCCGGAGGGCTTCAGCAAAGTGCTTATCTGCAATTATAGTATCTCGTCCTGAAATGTTGTCTAAGATGTATCTGGAGGCTTGTCCAAAGTTAATCGAACGGTTTAGGGAAAGAGAGGAAAATGTAAAGATGGACATCTTTAACACATTTATTGAGTTGTTACGCCAAACTGGTAACATGACAAAAGGACAAGGTGACATTGATGAGTCTAGCCCTAGATGGTTGCTGAAACAAGAAGTACCTAAGGTTGTCAAATCCATCAATAGGCAGTTGCGTGAAAAATCAATCAAGACAAAGGTTGGAGCATTCTCTGTATTGAAGGAGCTTGTTGTTGTACTGCCAGACTGTCTTGCTGATCATATTGGGTCACTTGTTCCTGGGATTGAGAAGGCTTTGAATGATAAGTCATCTACCTCCAACCTGAAGATTGAAGCCCTTGTATTTACAAGACTTGTTATGGCTTCACATTCCCCAGCTGTGTTTCATCCATACATACAGGCCCTTTCTGGCCCAATATTGTCTGCTATTGGAGACAGATATTACAAAGTCACCGCTGAGGCTTTAAGAGTCTGCGGAGAGCTAGTTCGTGTACTTCGTCCAAATTTTGAGGCACGCACTCTAGATTACAGGCCATATATTGGTCCAATCTATAAGGCTATCTTGGCCCGCTTGGCAAATCAGGATCAGGATCAGGAAGTTAAAGAGTGTGCCATATCTTGCATGAGCCTTGTGGTATTCACGTTTGGTGATGGTCTCCAAAGGGAACTGCCGGCATGCCTTCCCATTCTTGTTGATAGAATGGGTAATGAAATAACTAGACTTACAGCAGTTAAGGCGTTTGCAGTGATTGCTAAATCACCTCTTCGCATTGATCTTTCGTGTGTCCTAGACCATGTCATTTCTGAGCTCACGGCTTTCCTTCGAAAGGCAAACAGAGCTCTAAGGCAGGCTACATTGGGAACACTAAATTCTCTTGTTGTTGCGTATGGTGGTCAAATTGGATCCTCTTATGAAACTATTATTGCTGAACTTTCTACGCTCATTAGTGACATGGATTTGCACATGACTGCTCTTGCGCTGGAACTTTGTTGCACGATCATGGTCGATAGAAAATCCATCCAAAATGTTGGTCTTGCAGTGAGGTACAAGGTTTTGCCCCAGGCCCTTATTTTGATCAGGAGTGCTCTCTTGCAAGGGCAGGCACTACAGGCACTGCAGAGATTTTTTGCTTCACTGGTCCAGTCTGCAAATACAAGCTTTGACACTTTGTTGGATTCTCTTATTTCTACTGCTAAACCATCGCAGTCAGGTGGACTTGCCAAACAAGCATTGTCTTCCATTGCACAGTGTGTTGCTGTGTTGTGCTTAGCAGCTGGGGATCAGAAGTGTGCCTCAACTATTGAAATGCTTAAAGGCATTTTAAAAGATGACAGCACTACTAATTCTGCTAAACAGCACATGGCCTTGTTATGTTTGGGAGAAATTGGAAGAAGGAAGGACCTCAGCAATCATGCTCAAATTGAGAATATTGTCATTGAGTCATTTCAGTCACCTTTTGAGGAGATCAAATCTGCAGCGTCATATGCTCTCGGAAACATTGCTGTTGGAAATTTATCGAAGTATTTGCCTTTTATCTTGAATCAGATTGACAACCAACAGAAGAAACAGTATCTATTGCTTCATTCACTGAAAGAGGTAATTGCACGGCAGTCTGTTGACCATACTGGCCAGAGTGAGCTCCAGGATTCAAACATTGAGAAGATTTTGGCATTGCTCTTTAATCACTGTGAAAGTGAGGAGGAAGGAGTTCGGAATGTAGTTGCAGAATGCTTAGGCAAAATTGCTCTGATTGAACCTAGGAAATTAATCCCTGCTCTAAAGGAACGCACATCTAGTCCTGCTGCAAACACAAGAGCTACAGTTGCCATTGCTATAAAATATTCAATTGTTGAACGGCCTGGAAAAATAGATGAAATTATGTACTCCGAGATTTCTACCTTCCTGATGTTGATTAAAGACAGTGACAGGCACGTGAGGCGTGCAGCTGTGCTGGCCTTGAGTACAGCTGCCCACAACAAGCCAAATTTGATTAAGGGTCTTCTTCCTGAATTATTGCCTCTTTTGTATGACCAAACTGTTGTTAAGCAAGAATTGATCAGAACAGTTGACCTTGGGCCTTTCAAGCATGTTGTGGACGATGGTCTTGAACTCAGGAAAGCTGCCTTTGAATGTGTGGATACATTGCTGGATAGCTGTCTTGATCAAGTGAACCCATCATCATTTATCGTTCCTTTCCTCTTATCTGGTTTAGGTGATCATTATGATGTAAAAATGCCTTGCCATCTGATTCTCTCAAAGCTAGCAGACAAGTGCCCTTCTGCTGTTCTGGCAGTTTTGGACTCATTAGTTGACCCCATTGAGAAAACTATAAATCACAAACCCAAGGGCGATGCAGTGAAGCAAGAGGTTGATCGCAATGAAGACATGATTCGAAGTGCTCTTCGAGCAATCGCTGCTCTAAGCCGCATAAGTGGTAATGATTACAGCATGAGGTTCAAGAATCTGATGAACAAGATAATGGCCTCACCTCCGCTTGCTGACAAGTACAACTCGGTGCGCAGCGAGTAA
Protein Sequence
- >LOC_Os02g07120.1
MANMNITTILEKMTGKDKDYRYMATSDLLSELNKEGFKADQDIEPKLTTTVLQQLEDASGDVSGLAVKCLAPLVKKVGEDRVVEMTNILCDKLLNGKDQHRDTASIALKTIIVEVTTTSLAEKILVSLAPQLIKGATAGKSAEVKCECLDILGDVLHRFGNLITKDHDSMLTALLSQLSSNQASVRKKSISCIASLAACLSDDLLAKATFEVVQLLKNRSAKSEIARTNIQMIGALSRSVGYRFGPHLAEAVPLLINYCTSASENDEELREYSLQALESFMLRCPRDISPYCEGILNLALEYISYDPNFTDSMEEDTDDEAQDEEDDDESANEYTDDEDASWKVRRASAKCLSAIIVSRPEMLSKMYLEACPKLIERFREREENVKMDIFNTFIELLRQTGNMTKGQGDIDESSPRWLLKQEVPKVVKSINRQLREKSIKTKVGAFSVLKELVVVLPDCLADHIGSLVPGIEKALNDKSSTSNLKIEALVFTRLVMASHSPAVFHPYIQALSGPILSAIGDRYYKVTAEALRVCGELVRVLRPNFEARTLDYRPYIGPIYKAILARLANQDQDQEVKECAISCMSLVVFTFGDGLQRELPACLPILVDRMGNEITRLTAVKAFAVIAKSPLRIDLSCVLDHVISELTAFLRKANRALRQATLGTLNSLVVAYGGQIGSSYETIIAELSTLISDMDLHMTALALELCCTIMVDRKSIQNVGLAVRYKVLPQALILIRSALLQGQALQALQRFFASLVQSANTSFDTLLDSLISTAKPSQSGGLAKQALSSIAQCVAVLCLAAGDQKCASTIEMLKGILKDDSTTNSAKQHMALLCLGEIGRRKDLSNHAQIENIVIESFQSPFEEIKSAASYALGNIAVGNLSKYLPFILNQIDNQQKKQYLLLHSLKEVIARQSVDHTGQSELQDSNIEKILALLFNHCESEEEGVRNVVAECLGKIALIEPRKLIPALKERTSSPAANTRATVAIAIKYSIVERPGKIDEIMYSEISTFLMLIKDSDRHVRRAAVLALSTAAHNKPNLIKGLLPELLPLLYDQTVVKQELIRTVDLGPFKHVVDDGLELRKAAFECVDTLLDSCLDQVNPSSFIVPFLLSGLGDHYDVKMPCHLILSKLADKCPSAVLAVLDSLVDPIEKTINHKPKGDAVKQEVDRNEDMIRSALRAIAALSRISGNDYSMRFKNLMNKIMASPPLADKYNSVRSE*