Gene Details:

Functional Descriptions:

  • A Nucleus-Encoded Chloroplast Protein YL1 Is Involved in Chloroplast Development and Efficient Biogenesis of Chloroplast ATP Synthase in Rice.
  • The YL1 mutation showed reduced chlorophyll contents, abnormal chloroplast morphology, and decreased photochemical efficiency.
  • Moreover, YL1 deficiency disrupts the expression of genes associated with chloroplast development and photosynthesis.
  • Map-based cloning and characterization of the novel yellow-green leaf gene YS83 in rice (Oryza sativa).
  • Taken together, we successfully identified a novel yellow-green leaf gene YS83.
  • Gene YS83 was expressed in a wide range of tissues, and its encoded protein was targeted to the chloroplast.
  • 6%, respectively, meanwhile its seed setting rate and 1000-grain weight (seed size) were not significantly affected in the mutant, so leaf-color mutant gene YS83 could be used as a trait marker gene in commercial hybrid rice production.
  • Map-based cloning and sequencing analysis suggested that the candidate gene was YS83 (LOC_Os02g05890) encoding a protein containing 165 amino acid residues.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os02g05890.1
    AGCCGCATGTCACTGCCACTCTGCACTCTTCTCTCATCCAAAACCCCAATTTCCCACCCAAATCTATCTCTTCTCTCATCTTCTTCTCTCCTGCGGATTTGCAAATTACACACTTCTGCAAGCTAAAAAATCCAGTTTTCTTGCTCAGGCTAGTGCCTGGTTGTATCTACAGCTCAGCTCAGAAAGAAAGGAGTGGTTTTTGAGGAGTGGTTTTTGTCTACACAGCTGCTGCATATCATGCCTCCACTTGCCACAATGTCATCGCCAGGTTCGCTTCTTCTGTTGACCCCCGCTGTGTACCAGGGGATTGGGAGAAATCGTGGAGGACAAAGCCAGGAAGGACAATCTATCTCGTCTTCACGATCTCTCAAGACTAAACTCAGCGTTTCTGCCAGAGCAGTTTCTTCATGCGAAGCATCCATGAGAATAACATGTTGCGCAAACCAGACACAGACTGCACGACGCAAATCTTTCTCTGGACCTACCTCACCGCCATCAGGGTCAGTTAAAGAGAAAGTGAGGAGTCCAAAGCTTGACGATGGAGGCACCGGCTTCCCGCCATTCCGGTTCGGTGGAGGAGGAGGAGGTGGAGGTGGAGGCGGCAGCAACTCTGCCGGTGGATTCATCCTGTTCGTGATCGTTTTGCTTCTTGATTACCTGAGGGAGTTTGAGAGGAACCTGCAGAATGGAACAAGGAGGGGCAGTGACTATGACAATGGGCTCGCTCCCCAATAGTTGGTTTGTTTCATAGGACACTTTAGCGACGATCCGAAATGCAAGTGGGCTGACCCGTAAACCCACTTATAAATCATTTAAGCGGGTCGATCCGTGGCTGGCCACTGGCCCATTTGCATCCTTATCTGAAACTCCTTTTCTGGAAATGTGTCAAGTGAGAATTGTGCCTGAGAAATGGTAATGGAGTGTAGCAGCCTTCTGGAAAGAAATGGTAATGGCATGTAGAAAGCTGAGACTGGTGTATCAAAGGCCAATGACAATAGCTACATGATATTTGAAGGGCCTTGATGAGGCAAATGAGTGACAATGGACCAGGTGTTTAAAAATGTGAATTTTTTGTTGAGATTGTTGATTGGATATGTTGCGAGAAGTGTTTGGAAATTTCAATAGAACTATTGCGGGCTCAATACTGCATAACTATATGTTGCATACAACAGTGACATTTCACATTTGTTTGCATGAAAAATCGTTAACATACTGTTGGA
CDS Sequence
  • >LOC_Os02g05890.1
    ATGCCTCCACTTGCCACAATGTCATCGCCAGGTTCGCTTCTTCTGTTGACCCCCGCTGTGTACCAGGGGATTGGGAGAAATCGTGGAGGACAAAGCCAGGAAGGACAATCTATCTCGTCTTCACGATCTCTCAAGACTAAACTCAGCGTTTCTGCCAGAGCAGTTTCTTCATGCGAAGCATCCATGAGAATAACATGTTGCGCAAACCAGACACAGACTGCACGACGCAAATCTTTCTCTGGACCTACCTCACCGCCATCAGGGTCAGTTAAAGAGAAAGTGAGGAGTCCAAAGCTTGACGATGGAGGCACCGGCTTCCCGCCATTCCGGTTCGGTGGAGGAGGAGGAGGTGGAGGTGGAGGCGGCAGCAACTCTGCCGGTGGATTCATCCTGTTCGTGATCGTTTTGCTTCTTGATTACCTGAGGGAGTTTGAGAGGAACCTGCAGAATGGAACAAGGAGGGGCAGTGACTATGACAATGGGCTCGCTCCCCAATAG
Protein Sequence
  • >LOC_Os02g05890.1
    MPPLATMSSPGSLLLLTPAVYQGIGRNRGGQSQEGQSISSSRSLKTKLSVSARAVSSCEASMRITCCANQTQTARRKSFSGPTSPPSGSVKEKVRSPKLDDGGTGFPPFRFGGGGGGGGGGGSNSAGGFILFVIVLLLDYLREFERNLQNGTRRGSDYDNGLAPQ*