Information report for OsbHLH59;OsbHLH059
Gene Details
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Functional Descriptions
- Moreover, transcriptional analysis revealed that mechanical wounding and treatment with MeJA resulted in an obvious increase in transcript levels of OsbHLH59 and OsERF71 in root and shoot tissues.
- OsbHLH058 and OsbHLH059 transcription factors positively regulate iron deficiency responses in rice.
- Subgroup IVc basic helix-loop-helix transcription factors OsbHLH058 and OsbHLH059 positively regulate major iron deficiency responses in rice in a similar but distinct manner, putatively under partial control by OsHRZs.
- In the present study, we investigated the functions of OsbHLH058 and OsbHLH059 related to iron deficiency response.
- OsbHLH059 knockdown lines were also susceptible to iron deficiency, and formed characteristic brownish regions in iron-deficient new leaves.
- OsbHLH059 knockdown lines also showed reduced expression of many iron deficiency-inducible genes.
- These results indicate that OsbHLH058 and OsbHLH059 positively regulate major iron deficiency responses in a similar but distinct manner, and that this function may be partially controlled by OsHRZs.
- We also provide evidence that OsPRI2 and OsPRI3 bind to the promoters of OsIRO2 and OsIRO3, two key regulators of Fe homeostasis.
- Oryza sativa POSITIVE REGULATOR OF IRON DEFICIENCY RESPONSE 2 (OsPRI2) and OsPRI3 are involved in the maintenance of Fe homeostasis.
Functional Keywords
- root , shoot , wounding , transcription-factor , iron , homeostasis
Literature and News
- Identification of two transcription factors activating the expression of OsXIP in rice defence response . DOI: 10.1186/s12896-017-0344-7 ; PMID: 28270131
- OsbHLH058 and OsbHLH059 transcription factors positively regulate iron deficiency responses in rice . DOI: 10.1007/s11103-019-00917-8 ; PMID: 31552586
- Oryza sativa POSITIVE REGULATOR OF IRON DEFICIENCY RESPONSE 2 (OsPRI2) and OsPRI3 are involved in the maintenance of Fe homeostasis . DOI: 10.1111/pce.13655 ; PMID: 31674679
Gene Resources
- UniProt: A0A0P0VE33
- EMBL: AP004121, AP008208, CM000139
- EnsemblPlants: Os02t0116600-01, Os02t0116600-02
- Gramene: Os02t0116600-01, Os02t0116600-02
- KEGG: dosa:Os02g0116600, osa:4328080
- Orthologous matrix: CGPGIND
- InterPro: IPR011598, IPR036638, IPR044818
- PANTHER: PTHR46133, PTHR46133:SF15
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- OrthoDB: A0A0P0VE33
- SWISS-MODEL: A0A0P0VE33
- Conserved Domain Database: cd11446
Sequences
cDNA Sequence
- >LOC_Os02g02480.3
CCAGCATCTTCCTCAGCCACCAACCTATTCTCACTTTTACACCCAACCCCTCCAAAAAAGTATAAAATCACAACATCACCCCTCTCCACCACAGCTAAAAACTACTAAGCGAGGACTCGTTAGACATTACAGTTATATCCAGGGTGCAATCTGCAAAAGTCTCATCCCCAAATCCCCAATTCTTCCCCGACCTCTCGCTCGCGGAGGAGGAGCGAGAATCCCCGAACCCTAGGCCCGATCTCCCGCACCCGCCGCGGGCGATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAATTAGGTGCAGACTAGCTATGCTGCTATTCATCCATTGGCAGATCAAAATGTGTTCGGTCTTCCTGGAGAGTAAAATAGTCCGCGATGCTGTCCATTACGTGGTAAACTGTTCTTTTATTGGAGTTCTGTTTTTAACTCGTCCTATTGAGGGGCGATGCCTGTAATTAATCTGGATCGTAACCCTCTTGCCTGGTGAATGCTCCACAAACTCTCATGTCCCTCGCATGAGTTTGTTCAAGTGGGAAAAAAAGAAAAAA - >LOC_Os02g02480.1
CCAGCATCTTCCTCAGCCACCAACCTATTCTCACTTTTACACCCAACCCCTCCAAAAAAGTATAAAATCACAACATCACCCCTCTCCACCACAGCTAAAAACTACTAAGCGAGGACTCGTTAGACATTACAGTTATATCCAGGGTGCAATCTGCAAAAGTCTCATCCCCAAATCCCCAATTCTTCCCCGACCTCTCGCTCGCGGAGGAGGAGCGAGAATCCCCGAACCCTAGGCCCGATCTCCCGCACCCGCCGCGGGCGATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAATTAGGTGCAGACTAGCTATGCTGCTATTCATCCATTGGCAGATCAAAATGTGTTCGGTCTTCCTGGAGAGTAAAATAGTCCGCGATGCTGTCCATTACGTGGTAAACTGTTCTTTTATTGGAGTTCTGTTTTTAACTCGTCCTATTGAGGGGCGATGCCTGTAATTAATCTGGATCGTAACCCTCTTGCCTGGTGAATGCTCCACAAACTCTCATGTCCCTCGCATGAGTTTGTTCAAGTGGGAAAAAAAGAAAAAA - >LOC_Os02g02480.2
CCAGCATCTTCCTCAGCCACCAACCTATTCTCACTTTTACACCCAACCCCTCCAAAAAAGTATAAAATCACAACATCACCCCTCTCCACCACAGCTAAAAACTACTAAGCGAGGACTCGTTAGACATTACAGTTATATCCAGGGTGCAATCTGCAAAAGTCTCATCCCCAAATCCCCAATTCTTCCCCGACCTCTCGCTCGCGGAGGAGGAGCGAGAATCCCCGAACCCTAGGCCCGATCTCCCGCACCCGCCGCGGGCGATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAATTAGGTGCAGACTAGCTATGCTGCTATTCATCCATTGGCAGATCAAAATGTGTTCGGTCTTCCTGGAGAGTAAAATAGTCCGCGATGCTGTCCATTACGTGGTAAACTGTTCTTTTATTGGAGTTCTGTTTTTAACTCGTCCTATTGAGGGGCGATGCCTGTAATTAATCTGGATCGTAACCCTCTTGCCTGGTGAATGCTCCACAAACTCTCATGTCCCTCGCATGAGTTTGTTCAAGTGGGAAAAAAAGAAAAAA
CDS Sequence
- >LOC_Os02g02480.3
ATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAA - >LOC_Os02g02480.1
ATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAA - >LOC_Os02g02480.2
ATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAA
Protein Sequence
- >LOC_Os02g02480.3
MDGGGDPVDEFLIGGGGEDGDLGVFCDGVPTLPCDGGLGIDDVSGDTCCLDQSVLGKRGRDESSSSGPKSKACREKIRRDRLNDRFLELSSVINPDKQAKLDKANILSDAARLLAELRGEAEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAEKERLEQQVKALSVAPTGFVPHLPHPAAFHPAAFPPFIPPYQALGNKNAPTPAAFQGMAMWQWLPPTAVDTTQDPKLWPPNA* - >LOC_Os02g02480.1
MDGGGDPVDEFLIGGGGEDGDLGVFCDGVPTLPCDGGLGIDDVSGDTCCLDQSVLGKRGRDESSSSGPKSKACREKIRRDRLNDRFLELSSVINPDKQAKLDKANILSDAARLLAELRGEAEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAEKERLEQQVKALSVAPTGFVPHLPHPAAFHPAAFPPFIPPYQALGNKNAPTPAAFQGMAMWQWLPPTAVDTTQDPKLWPPNA* - >LOC_Os02g02480.2
MDGGGDPVDEFLIGGGGEDGDLGVFCDGVPTLPCDGGLGIDDVSGDTCCLDQSVLGKRGRDESSSSGPKSKACREKIRRDRLNDRFLELSSVINPDKQAKLDKANILSDAARLLAELRGEAEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAEKERLEQQVKALSVAPTGFVPHLPHPAAFHPAAFPPFIPPYQALGNKNAPTPAAFQGMAMWQWLPPTAVDTTQDPKLWPPNA*