Gene Details:
- MSU gene ID: LOC_Os02g02480
- RAPdb gene ID: Os02g0116600
- Gene Symbol: OsbHLH59 OsbHLH059 OsPRI3
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Moreover, transcriptional analysis revealed that mechanical wounding and treatment with MeJA resulted in an obvious increase in transcript levels of OsbHLH59 and OsERF71 in root and shoot tissues.
- OsbHLH058 and OsbHLH059 transcription factors positively regulate iron deficiency responses in rice.
- Subgroup IVc basic helix-loop-helix transcription factors OsbHLH058 and OsbHLH059 positively regulate major iron deficiency responses in rice in a similar but distinct manner, putatively under partial control by OsHRZs.
- In the present study, we investigated the functions of OsbHLH058 and OsbHLH059 related to iron deficiency response.
- OsbHLH059 knockdown lines were also susceptible to iron deficiency, and formed characteristic brownish regions in iron-deficient new leaves.
- OsbHLH059 knockdown lines also showed reduced expression of many iron deficiency-inducible genes.
- These results indicate that OsbHLH058 and OsbHLH059 positively regulate major iron deficiency responses in a similar but distinct manner, and that this function may be partially controlled by OsHRZs.
- We also provide evidence that OsPRI2 and OsPRI3 bind to the promoters of OsIRO2 and OsIRO3, two key regulators of Fe homeostasis.
- Oryza sativa POSITIVE REGULATOR OF IRON DEFICIENCY RESPONSE 2 (OsPRI2) and OsPRI3 are involved in the maintenance of Fe homeostasis.
Function-related keywords:
- root , shoot , wounding , transcription-factor , iron , homeostasis
Literature:
- Identification of two transcription factors activating the expression of OsXIP in rice defence response . DOI: 10.1186/s12896-017-0344-7 ; PMID: 28270131
- OsbHLH058 and OsbHLH059 transcription factors positively regulate iron deficiency responses in rice . DOI: 10.1007/s11103-019-00917-8 ; PMID: 31552586
- Oryza sativa POSITIVE REGULATOR OF IRON DEFICIENCY RESPONSE 2 (OsPRI2) and OsPRI3 are involved in the maintenance of Fe homeostasis . DOI: 10.1111/pce.13655 ; PMID: 31674679
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os02g02480.3
CCAGCATCTTCCTCAGCCACCAACCTATTCTCACTTTTACACCCAACCCCTCCAAAAAAGTATAAAATCACAACATCACCCCTCTCCACCACAGCTAAAAACTACTAAGCGAGGACTCGTTAGACATTACAGTTATATCCAGGGTGCAATCTGCAAAAGTCTCATCCCCAAATCCCCAATTCTTCCCCGACCTCTCGCTCGCGGAGGAGGAGCGAGAATCCCCGAACCCTAGGCCCGATCTCCCGCACCCGCCGCGGGCGATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAATTAGGTGCAGACTAGCTATGCTGCTATTCATCCATTGGCAGATCAAAATGTGTTCGGTCTTCCTGGAGAGTAAAATAGTCCGCGATGCTGTCCATTACGTGGTAAACTGTTCTTTTATTGGAGTTCTGTTTTTAACTCGTCCTATTGAGGGGCGATGCCTGTAATTAATCTGGATCGTAACCCTCTTGCCTGGTGAATGCTCCACAAACTCTCATGTCCCTCGCATGAGTTTGTTCAAGTGGGAAAAAAAGAAAAAA - >LOC_Os02g02480.1
CCAGCATCTTCCTCAGCCACCAACCTATTCTCACTTTTACACCCAACCCCTCCAAAAAAGTATAAAATCACAACATCACCCCTCTCCACCACAGCTAAAAACTACTAAGCGAGGACTCGTTAGACATTACAGTTATATCCAGGGTGCAATCTGCAAAAGTCTCATCCCCAAATCCCCAATTCTTCCCCGACCTCTCGCTCGCGGAGGAGGAGCGAGAATCCCCGAACCCTAGGCCCGATCTCCCGCACCCGCCGCGGGCGATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAATTAGGTGCAGACTAGCTATGCTGCTATTCATCCATTGGCAGATCAAAATGTGTTCGGTCTTCCTGGAGAGTAAAATAGTCCGCGATGCTGTCCATTACGTGGTAAACTGTTCTTTTATTGGAGTTCTGTTTTTAACTCGTCCTATTGAGGGGCGATGCCTGTAATTAATCTGGATCGTAACCCTCTTGCCTGGTGAATGCTCCACAAACTCTCATGTCCCTCGCATGAGTTTGTTCAAGTGGGAAAAAAAGAAAAAA - >LOC_Os02g02480.2
CCAGCATCTTCCTCAGCCACCAACCTATTCTCACTTTTACACCCAACCCCTCCAAAAAAGTATAAAATCACAACATCACCCCTCTCCACCACAGCTAAAAACTACTAAGCGAGGACTCGTTAGACATTACAGTTATATCCAGGGTGCAATCTGCAAAAGTCTCATCCCCAAATCCCCAATTCTTCCCCGACCTCTCGCTCGCGGAGGAGGAGCGAGAATCCCCGAACCCTAGGCCCGATCTCCCGCACCCGCCGCGGGCGATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAATTAGGTGCAGACTAGCTATGCTGCTATTCATCCATTGGCAGATCAAAATGTGTTCGGTCTTCCTGGAGAGTAAAATAGTCCGCGATGCTGTCCATTACGTGGTAAACTGTTCTTTTATTGGAGTTCTGTTTTTAACTCGTCCTATTGAGGGGCGATGCCTGTAATTAATCTGGATCGTAACCCTCTTGCCTGGTGAATGCTCCACAAACTCTCATGTCCCTCGCATGAGTTTGTTCAAGTGGGAAAAAAAGAAAAAA
CDS Sequence
- >LOC_Os02g02480.3
ATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAA - >LOC_Os02g02480.1
ATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAA - >LOC_Os02g02480.2
ATGGACGGAGGCGGAGACCCCGTTGACGAGTTCCTCATCGGCGGCGGCGGCGAGGACGGCGACCTCGGCGTCTTCTGCGACGGTGTGCCGACGCTGCCCTGCGATGGAGGACTTGGGATTGATGATGTCAGTGGAGATACTTGTTGCCTTGACCAATCTGTTTTAGGGAAAAGAGGTAGAGATGAATCATCATCATCTGGTCCAAAGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGATAGACTGAATGACAGGTTCCTTGAGTTATCTTCCGTTATCAATCCTGACAAGCAAGCTAAGTTGGATAAAGCAAATATCTTGAGTGATGCAGCTCGTCTGTTGGCAGAACTCAGAGGCGAGGCAGAAAAGCTTAAAGAATCTAATGAGAAGCTACGAGAAACAATCAAGGACCTTAAGGTGGAGAAGAATGAACTCCGTGATGAGAAAGTTACTCTGAAGGCAGAGAAGGAGAGGCTGGAACAGCAAGTTAAAGCATTGAGTGTTGCTCCTACAGGATTTGTTCCTCATCTCCCTCATCCAGCTGCATTCCATCCCGCTGCATTCCCTCCATTTATACCACCTTATCAAGCTCTGGGCAACAAAAATGCTCCTACGCCCGCAGCATTCCAAGGGATGGCAATGTGGCAGTGGTTGCCTCCAACTGCTGTGGACACAACTCAAGATCCAAAGCTTTGGCCACCAAATGCTTAA
Protein Sequence
- >LOC_Os02g02480.3
MDGGGDPVDEFLIGGGGEDGDLGVFCDGVPTLPCDGGLGIDDVSGDTCCLDQSVLGKRGRDESSSSGPKSKACREKIRRDRLNDRFLELSSVINPDKQAKLDKANILSDAARLLAELRGEAEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAEKERLEQQVKALSVAPTGFVPHLPHPAAFHPAAFPPFIPPYQALGNKNAPTPAAFQGMAMWQWLPPTAVDTTQDPKLWPPNA* - >LOC_Os02g02480.1
MDGGGDPVDEFLIGGGGEDGDLGVFCDGVPTLPCDGGLGIDDVSGDTCCLDQSVLGKRGRDESSSSGPKSKACREKIRRDRLNDRFLELSSVINPDKQAKLDKANILSDAARLLAELRGEAEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAEKERLEQQVKALSVAPTGFVPHLPHPAAFHPAAFPPFIPPYQALGNKNAPTPAAFQGMAMWQWLPPTAVDTTQDPKLWPPNA* - >LOC_Os02g02480.2
MDGGGDPVDEFLIGGGGEDGDLGVFCDGVPTLPCDGGLGIDDVSGDTCCLDQSVLGKRGRDESSSSGPKSKACREKIRRDRLNDRFLELSSVINPDKQAKLDKANILSDAARLLAELRGEAEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAEKERLEQQVKALSVAPTGFVPHLPHPAAFHPAAFPPFIPPYQALGNKNAPTPAAFQGMAMWQWLPPTAVDTTQDPKLWPPNA*