Information report for OsGABA-T
Gene Details
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Functional Descriptions
- OsGABA-T expression is induced by blast fungus infection, mechanical wounding and ultraviolet radiation in rice leaves and is not detected in normal rice organs.
- Molecular cloning and differential expression of an gamma-aminobutyrate transaminase gene, OsGABA-T, in rice (Oryza sativa) leaves infected with blast fungus.
- Our data suggest that OsGABA-T (GABA shunt) may play a role in restricting the levels of cell death during the host-pathogen interaction.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q6ZH29
- EMBL: AF324485, AP004090, AP008208
- AlphaFoldDB: Q6ZH29
- EnsemblPlants: Os02t0112900-01
- Gramene: Os02t0112900-01
- KEGG: dosa:Os02g0112900
- Orthologous matrix: GGCFMHG
- InterPro: IPR005814, IPR015421, IPR015422
- PANTHER: PTHR42684, PTHR42684:SF8
- SUPFAM: SSF53383
- PROSITE: PS00600
- Gene3D: 3.40.640.10, 3.90.1150.10
- OrthoDB: Q6ZH29
- SWISS-MODEL: Q6ZH29
- Conserved Domain Database: cd00610
- eggNOG: KOG1404
Sequences
cDNA Sequence
- >LOC_Os02g02210.1
GAGAACGATCAGTGCGCCAGACATTATAAGCGAACTTTCATCTTTATATATGACGACTCCTCATGGCCTCCTCCAGTACTCATCAGGTGCCTTCTCTGATCAGGTGCCAGCTGATGACTCTGCTGAAGAACATGGGGTTAAGGATCATGCCATGCTTGCACCGTTTACAGCCGCATGGCAGACCGCTATCTCACCACCACTGGTTATTGAGAGATCTGAGGGATGTTACGTTTACGATGTCAACGGGACCAAGTATCTAGATGCACTTGCAGGATTGTTGTCTACAGCTTTAGGTGGTAGTGAGCCTCGTTTAGTCAAAGCTGCTACGGAGCAATTAAACAAGTTACCCTTCTACCACTCCTTTTGGAACCATACAACCAGGCCTTCTTTGGATCTTGCGAAAGAACTTATTAGCATGTTTACTGCCAGGGAAATGGGCAAAGTGTTCTTTACGAACAGTGGTTCAGAAGCAAATGACTCTCAGGTTAAGATAGTATGGTATTATAACAATGCATTGGGGAGGCCAAAGAAGAAAAATATCATTTCACGGACACAATCATATCATGGAACAACATTCATATCAGCTAGTCTATCAGGTCTTCCTACCTTGCATCAGGATTTTGATCTGCCAGGACGTTTTGTTCTGCACACAGACTGCCCTCACTACTGGCGCTTCCATCTCCCTGGTGAGACAGAAGAAGAATTTGCAACTAGACTTGCCGATAATTTAGAGAATCTTATCCTCAAACAAGGACCAGAAACGATCGCTGCCTTCATTGCTGAACCTGTGATTGGTGCTGGTGGTGTTATCCTTCCTCCAAAGACATATTTTGAGAAGATTCAAGCAGTGGTTAAGAAGTATGACATCCTTTTTATTGTAGATGAGGTTATTACTGGATTTGGAAGGTTGGGAACCATGTTCGGATCTGATTTGTATAACATCAAACCAGATCTTGTCTCCTTGGCCAAGGCTCTTTCTTCTGCCTATGCTCCCATTGGAGCGATACTTGTTAGCCCGGAAATATCAGATGTGATTCATTCTCATAGTAACAAGCTCGGTACATTTGCTCATGGCTTTACATATTCTGGCCATCCTGTTTCCTGTGCTGTTGCTTTAGAGGCGCTGAAAATTTATCGGGAAAGAGATATTCCTGGTCATGTCACACATGTTGCTCAAAGGTTCCAGGAGGGAATCAAGGCCTTTGCAGCTGGAAGTCCAATTGTTGGGGAGACACGTGGTGTAGGATTGCTGATAGCAACTGAGTTCACCGATAACAAATCACCATATGAGTTATTCCCTTTTGAGTGGGGTGTTGGTGAAATATTTGGACAGGAGTGTAAGAAACGTGGCATGATGGTTAAGGTTCTTGGAAACTTGATAGCGATGTCCCCACCACTGATAATAACCCGTGAAGAAATTGATAAACTGGTGAGCATATATGGAGAAGCTCTGAAGGCAACAGAGGAAAGAGTGGCAGAGCTAAAATCCAAGAAGAATTAGTCAACATATGTCATCTATGGCAATGGCGGCAAAGGTTGAAGGCAATGATGTGGTCCCTGCACCGAATAAATTCCACTGGTGCTTGTTGTTCGATAATTTGTTGAAATATTACTGATGTTGTGTTAAAAGACAATTATTAGCTTTCCACTAAA
CDS Sequence
- >LOC_Os02g02210.1
ATGACGACTCCTCATGGCCTCCTCCAGTACTCATCAGGTGCCTTCTCTGATCAGGTGCCAGCTGATGACTCTGCTGAAGAACATGGGGTTAAGGATCATGCCATGCTTGCACCGTTTACAGCCGCATGGCAGACCGCTATCTCACCACCACTGGTTATTGAGAGATCTGAGGGATGTTACGTTTACGATGTCAACGGGACCAAGTATCTAGATGCACTTGCAGGATTGTTGTCTACAGCTTTAGGTGGTAGTGAGCCTCGTTTAGTCAAAGCTGCTACGGAGCAATTAAACAAGTTACCCTTCTACCACTCCTTTTGGAACCATACAACCAGGCCTTCTTTGGATCTTGCGAAAGAACTTATTAGCATGTTTACTGCCAGGGAAATGGGCAAAGTGTTCTTTACGAACAGTGGTTCAGAAGCAAATGACTCTCAGGTTAAGATAGTATGGTATTATAACAATGCATTGGGGAGGCCAAAGAAGAAAAATATCATTTCACGGACACAATCATATCATGGAACAACATTCATATCAGCTAGTCTATCAGGTCTTCCTACCTTGCATCAGGATTTTGATCTGCCAGGACGTTTTGTTCTGCACACAGACTGCCCTCACTACTGGCGCTTCCATCTCCCTGGTGAGACAGAAGAAGAATTTGCAACTAGACTTGCCGATAATTTAGAGAATCTTATCCTCAAACAAGGACCAGAAACGATCGCTGCCTTCATTGCTGAACCTGTGATTGGTGCTGGTGGTGTTATCCTTCCTCCAAAGACATATTTTGAGAAGATTCAAGCAGTGGTTAAGAAGTATGACATCCTTTTTATTGTAGATGAGGTTATTACTGGATTTGGAAGGTTGGGAACCATGTTCGGATCTGATTTGTATAACATCAAACCAGATCTTGTCTCCTTGGCCAAGGCTCTTTCTTCTGCCTATGCTCCCATTGGAGCGATACTTGTTAGCCCGGAAATATCAGATGTGATTCATTCTCATAGTAACAAGCTCGGTACATTTGCTCATGGCTTTACATATTCTGGCCATCCTGTTTCCTGTGCTGTTGCTTTAGAGGCGCTGAAAATTTATCGGGAAAGAGATATTCCTGGTCATGTCACACATGTTGCTCAAAGGTTCCAGGAGGGAATCAAGGCCTTTGCAGCTGGAAGTCCAATTGTTGGGGAGACACGTGGTGTAGGATTGCTGATAGCAACTGAGTTCACCGATAACAAATCACCATATGAGTTATTCCCTTTTGAGTGGGGTGTTGGTGAAATATTTGGACAGGAGTGTAAGAAACGTGGCATGATGGTTAAGGTTCTTGGAAACTTGATAGCGATGTCCCCACCACTGATAATAACCCGTGAAGAAATTGATAAACTGGTGAGCATATATGGAGAAGCTCTGAAGGCAACAGAGGAAAGAGTGGCAGAGCTAAAATCCAAGAAGAATTAG
Protein Sequence
- >LOC_Os02g02210.1
MTTPHGLLQYSSGAFSDQVPADDSAEEHGVKDHAMLAPFTAAWQTAISPPLVIERSEGCYVYDVNGTKYLDALAGLLSTALGGSEPRLVKAATEQLNKLPFYHSFWNHTTRPSLDLAKELISMFTAREMGKVFFTNSGSEANDSQVKIVWYYNNALGRPKKKNIISRTQSYHGTTFISASLSGLPTLHQDFDLPGRFVLHTDCPHYWRFHLPGETEEEFATRLADNLENLILKQGPETIAAFIAEPVIGAGGVILPPKTYFEKIQAVVKKYDILFIVDEVITGFGRLGTMFGSDLYNIKPDLVSLAKALSSAYAPIGAILVSPEISDVIHSHSNKLGTFAHGFTYSGHPVSCAVALEALKIYRERDIPGHVTHVAQRFQEGIKAFAAGSPIVGETRGVGLLIATEFTDNKSPYELFPFEWGVGEIFGQECKKRGMMVKVLGNLIAMSPPLIITREEIDKLVSIYGEALKATEERVAELKSKKN*