Gene Details:
- MSU gene ID: LOC_Os02g02020
- RAPdb gene ID: Os02g0110400
- Gene Symbol: OsCPPR1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Transcriptome analysis revealed that the transcript level of OsGOLDEN-LIKE1 (OsGLK1), which encodes a transcription factor that regulates plastid development and maintenance, was significantly higher in the OsCPPR1 knockdown plants compared to wild-type plants.
- Knocking down OsCPPR1 led to abnormal plastid development in tapetal cells, prolonged tapetal programmed cell death (PCD) and tapetum degradation, and significantly reduced pollen fertility.
- We therefore conclude that OsCPPR1 suppresses OsGLK1 in the regulation of plastid development and PCD in the tapetum.
- Overexpression of OsGLK1 resulted in abnormal tapetum and plastid development, similar to that seen in OsCPPR1 knockdown plants, and suppression of OsGLK1 partially restored pollen fertility in the OsCPPR1 knockdown plants.
Function-related keywords:
- transcription-factor , development , fertility , pollen , cell-death , tapetum , tapetal , PCD , programmed-cell-death , plastid , Pollen-Fertility , tapetal-programmed-cell-death
Literature:
- A cytosolic pentatricopeptide repeat protein is essential for tapetal plastid development by regulating OsGLK1 transcript levels in rice . DOI: 10.1111/nph.18105 ; PMID: 35306663
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os02g02020.1
GGGTGGTGTCGAGCCTCTTCCTCCTCCTCCTAAACCCTCGACTCTTCTCCCCGAGCTCCACTCCTCCACGCCGCCGCAGCCATGTCGCGCCGCCACCACCTCCACCTCCCCCTCCGCCTCCTCTCCCGCAACAACCCCTCCGCGCCTCTCTTCCGCCATGCCTTCTCCACCCTCGACACGCCGGAACCACCTCCCCCGGAGACCGAGGCCGAGGCCGAGGCTGTGCCGGAGGTGACGCCGGCGGAGGCGGCGGCGGCGACCCCCAACCCGCCCCGCCGCGAGGAGCCCCTCCACGAGACCATCCTCTACATGATCCGCCGCCGCCCGTGGACCACCCGCCTCGAGAACTCCATCCGCCTGCTCTCCCCGACGCTCGCCGCGCCGCTCGTCCACGGCGTCATCTCCGGGGCCGCCGCCGCCGGCCGCGCCGACCTCGCCCTCCAGTTCTTCCGCTTCGCCTACCGTCGCGCCGGCTTCAGCCCCGAGCCAGCCACCTTCTCCCTCCTCATCCCGATCCTCGCCTCCCACCGCATGCTCAACCACGCCCGCTGCATCCTCCTCGACACCATGCCCTCCTTCTCCATCGCCCCCGAGGAGGCCACCGTCGCCGCCCTCATCGCCGCCTACGGCAAGGCCAACATCCCGCAGGAATCCGTTAAGCTCTTCCGCTTGATGCCCGACCTCGGCATCGCCCGCACCGCGCTCTCCTACAACGCCGTCCTCAAGGCCATCCTCTGCCGCGGCCGAGAGGCCATGGCCAGGCGGATCTACAACGCCATGATCGCCGACGCCGTCACCCCTGACCTGTCCACCTACAACACATTGATCTGGGGGTTCGGCCTGTGCAAGAAGATGGAGGCAGCCTTGAGGGTGTTCGGGGACATGAAGGATCACGGGGTGACACCGGATGTGACGACGTACAACACTCTTCTCAATGCTTGGGTTCGGGCGGGTGATCTGGAGAGTGCCCGCAAAGTGTTTGACGAAATGCCAGGAGCTGGTTTTGCACAAAACTCGGTGTCGTACAATGTCATGATCAAGGGATATGTTGAAGCAGGTAAGGTGGAGGAGGCAGTGGGGCTGTTCTCGGAAATGGGGGAGAAGGGGTTGAGGTTGAGCGAGAAGACGTTTGCTGCTCTGATGCCAGGGCTCTGTGATGATGAGGGAAGGGTTGTGGAGGCCCGGAAGGCAATGGATGACATGGCGGAGCGGCGGCTCACTCCAAAGGACAAGTCAGTGTTTTTGAGGCTTGTGACGACGCTATGCCGAGCGGGTGACTTGGATGGTGCGTTGGATGTGCACCAGAAGAGTGGGCAGTTCAAGCATGTTCTTGTGGATCCAAGACAGTATGGGGTGCTGATGGAGAGCTTGTGCGCGGGTGGAAAGTGTGATGGTGCTGTTGAGGTGATGGATGAGCTTCTTGAGAAGGGGACACTGTTGAGCCCAAAGAGCCCTGTGCTTGAAGGGCCAGCTTATAATCCAGTGATTGAGTATTTGTGCAGCAATGGGAACACCAGCAAGGCTGAGACTTTCTTCAGGCAGCTGATGAAGAAAGGCGTTGATGACAAGGCTGCTTTTAACAGTCTTATCCGTGGGCATGCAAAGGAAGGTGTGCCAGAAGCAGCACAGGAGATTCTTGCCATTATGACACGCCGTGGTGTCCGTACTGACCCTGAATCGCATGCACTGCTTGTTGATAGCTTCCTGAAGAAGAATGAGCCAGCTGATGCAAAGACGGCACTTGACAGTATGATGGAACAAGGGCATGTACCGAGCCCATCCCTGTTCATGTCTGTCATGGTAGCGCTTTTCAACAGTGGCCGGGTTCAGACTGCTAGCAGGGTTATGAAGAGTATGATTGAGAAGGGGGTTACAGAGAACATGGACATGGCTCATAAGATTCTGGAAGCTCTCTTCATGAGGGGCCATGTGGAGGAAGCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTAGATAAGTTGCTGATTGCCCTCTGCGAGAATGACAAAGTGATGGAGGCACATAAGTTGGCTGATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAGGCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAACAAAGGAGGTGTCGTGGATCAAAAGGGTTGCGATGCCCTGATGGACAGCTTAAAAGCTGGAGGGTACTCAAAGCAAGCAGACATTTTGTCTAGGATATTGGCAGAGAATGCATCATCAACATCCAAGAGGGGCAAACGGGTTGCCATGGGTGCGTAGCGGTTTATCCATTCATGAGAAGATAGTACTATCTTCCTTTTGAATTGAAGAGCAGTGTTTTATTTCTTTTGTTTTTGCTTGCTGAGCTATTGGCCAAGTGGTCTTTTTTAGCCTGGGAGACAACATGGGCAGGTACATTTACCTTTTCTTTTTTTAGAAACCCCACATTTAGTTATGTACCATGCCTTAGCAAAAGAAAACATGTTTAATAATCAATGAAGATGTACTTGCTATGAATTTCATTGAGAAATTGAGCTGCCATGACTACAATTTCCTGTACTTGGGTTGGTTATAAGTGGCTCTGCTAAGACCACACAAGAAATTTCAGTTTTTGTATGAC
CDS Sequence
- >LOC_Os02g02020.1
ATGTCGCGCCGCCACCACCTCCACCTCCCCCTCCGCCTCCTCTCCCGCAACAACCCCTCCGCGCCTCTCTTCCGCCATGCCTTCTCCACCCTCGACACGCCGGAACCACCTCCCCCGGAGACCGAGGCCGAGGCCGAGGCTGTGCCGGAGGTGACGCCGGCGGAGGCGGCGGCGGCGACCCCCAACCCGCCCCGCCGCGAGGAGCCCCTCCACGAGACCATCCTCTACATGATCCGCCGCCGCCCGTGGACCACCCGCCTCGAGAACTCCATCCGCCTGCTCTCCCCGACGCTCGCCGCGCCGCTCGTCCACGGCGTCATCTCCGGGGCCGCCGCCGCCGGCCGCGCCGACCTCGCCCTCCAGTTCTTCCGCTTCGCCTACCGTCGCGCCGGCTTCAGCCCCGAGCCAGCCACCTTCTCCCTCCTCATCCCGATCCTCGCCTCCCACCGCATGCTCAACCACGCCCGCTGCATCCTCCTCGACACCATGCCCTCCTTCTCCATCGCCCCCGAGGAGGCCACCGTCGCCGCCCTCATCGCCGCCTACGGCAAGGCCAACATCCCGCAGGAATCCGTTAAGCTCTTCCGCTTGATGCCCGACCTCGGCATCGCCCGCACCGCGCTCTCCTACAACGCCGTCCTCAAGGCCATCCTCTGCCGCGGCCGAGAGGCCATGGCCAGGCGGATCTACAACGCCATGATCGCCGACGCCGTCACCCCTGACCTGTCCACCTACAACACATTGATCTGGGGGTTCGGCCTGTGCAAGAAGATGGAGGCAGCCTTGAGGGTGTTCGGGGACATGAAGGATCACGGGGTGACACCGGATGTGACGACGTACAACACTCTTCTCAATGCTTGGGTTCGGGCGGGTGATCTGGAGAGTGCCCGCAAAGTGTTTGACGAAATGCCAGGAGCTGGTTTTGCACAAAACTCGGTGTCGTACAATGTCATGATCAAGGGATATGTTGAAGCAGGTAAGGTGGAGGAGGCAGTGGGGCTGTTCTCGGAAATGGGGGAGAAGGGGTTGAGGTTGAGCGAGAAGACGTTTGCTGCTCTGATGCCAGGGCTCTGTGATGATGAGGGAAGGGTTGTGGAGGCCCGGAAGGCAATGGATGACATGGCGGAGCGGCGGCTCACTCCAAAGGACAAGTCAGTGTTTTTGAGGCTTGTGACGACGCTATGCCGAGCGGGTGACTTGGATGGTGCGTTGGATGTGCACCAGAAGAGTGGGCAGTTCAAGCATGTTCTTGTGGATCCAAGACAGTATGGGGTGCTGATGGAGAGCTTGTGCGCGGGTGGAAAGTGTGATGGTGCTGTTGAGGTGATGGATGAGCTTCTTGAGAAGGGGACACTGTTGAGCCCAAAGAGCCCTGTGCTTGAAGGGCCAGCTTATAATCCAGTGATTGAGTATTTGTGCAGCAATGGGAACACCAGCAAGGCTGAGACTTTCTTCAGGCAGCTGATGAAGAAAGGCGTTGATGACAAGGCTGCTTTTAACAGTCTTATCCGTGGGCATGCAAAGGAAGGTGTGCCAGAAGCAGCACAGGAGATTCTTGCCATTATGACACGCCGTGGTGTCCGTACTGACCCTGAATCGCATGCACTGCTTGTTGATAGCTTCCTGAAGAAGAATGAGCCAGCTGATGCAAAGACGGCACTTGACAGTATGATGGAACAAGGGCATGTACCGAGCCCATCCCTGTTCATGTCTGTCATGGTAGCGCTTTTCAACAGTGGCCGGGTTCAGACTGCTAGCAGGGTTATGAAGAGTATGATTGAGAAGGGGGTTACAGAGAACATGGACATGGCTCATAAGATTCTGGAAGCTCTCTTCATGAGGGGCCATGTGGAGGAAGCAATCGGCCGTGTCAATCTGATGGTGGAAAATGGATGCTTGCCTGATCTAGATAAGTTGCTGATTGCCCTCTGCGAGAATGACAAAGTGATGGAGGCACATAAGTTGGCTGATTTTGCATTGGACAGGGACTTTGATGTCAGCTTCTCAACCTATGACAGAGTCTTGGAGGCCCTGTACACTGAGGAGAAGACATTGCCTGCATACTCCATGCTTTGCAAGATCAAGAACAAAGGAGGTGTCGTGGATCAAAAGGGTTGCGATGCCCTGATGGACAGCTTAAAAGCTGGAGGGTACTCAAAGCAAGCAGACATTTTGTCTAGGATATTGGCAGAGAATGCATCATCAACATCCAAGAGGGGCAAACGGGTTGCCATGGGTGCGTAG
Protein Sequence
- >LOC_Os02g02020.1
MSRRHHLHLPLRLLSRNNPSAPLFRHAFSTLDTPEPPPPETEAEAEAVPEVTPAEAAAATPNPPRREEPLHETILYMIRRRPWTTRLENSIRLLSPTLAAPLVHGVISGAAAAGRADLALQFFRFAYRRAGFSPEPATFSLLIPILASHRMLNHARCILLDTMPSFSIAPEEATVAALIAAYGKANIPQESVKLFRLMPDLGIARTALSYNAVLKAILCRGREAMARRIYNAMIADAVTPDLSTYNTLIWGFGLCKKMEAALRVFGDMKDHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSEMGEKGLRLSEKTFAALMPGLCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTLCRAGDLDGALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMDELLEKGTLLSPKSPVLEGPAYNPVIEYLCSNGNTSKAETFFRQLMKKGVDDKAAFNSLIRGHAKEGVPEAAQEILAIMTRRGVRTDPESHALLVDSFLKKNEPADAKTALDSMMEQGHVPSPSLFMSVMVALFNSGRVQTASRVMKSMIEKGVTENMDMAHKILEALFMRGHVEEAIGRVNLMVENGCLPDLDKLLIALCENDKVMEAHKLADFALDRDFDVSFSTYDRVLEALYTEEKTLPAYSMLCKIKNKGGVVDQKGCDALMDSLKAGGYSKQADILSRILAENASSTSKRGKRVAMGA*