Information report for OsSR45
Gene Details
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Functional Descriptions
- Here, we show that OsFKBP20-1b, belonging to the immunophilin family, interacts with the splicing factor OsSR45 in both nuclear speckles and cytoplasmic foci and plays an essential role in post-transcriptional regulation of abiotic stress response.
- OsFKBP20-1b interacts with the splicing factor OsSR45 and participates in the environmental stress response at the post-transcriptional level in rice.
Functional Keywords
Literature and News
Sequences
cDNA Sequence
- >LOC_Os01g72890.2
CCCCTCCCTCAGACGACCCCCGACCAAAACCCTAGCCCCCAAACCCGCCCATCGGTCGCCTCCGCCGCCGGAGACGATGGCGAAGCCGCGCCGCGGCCGCTCCGCCTCGCGCTCCTCCTCGGGATCCTCCTCTCGCTCGCCGTCCCGCTCCGCCTCCTCGGGCTCCGGCTCCTCCCGGTCGCGCTCCCGCTCCCGCTCCTTCTCGTCGTCGTCGTCCCCTTCACGGAGCCGCTCCCCACCCGCTGCCAAGGCCAGCTCACCTGGGGCACGGAGAGGTCGATCTCCTTCATCCCCTGCTAAGAGAGGATCGCCATCAAAGAAAGGGCGTTCACCATCACCACCACCACCTAAAAAGGCTTCACCTCCTAGGAAAGCATCTCCTGCTCCTGAATCAGTTGTTCTCCACATTGATCATTTGTCCAGGAATGTTAATGAAGCTCATTTGAAAGAGATATTCGGAAACTTTGGTGAAGTGGTTAACGTGGAGCTATCCATGGATCGAATGGTCAACCTTCCTCGTGGGTATGGATATATTGAGTTCAAGAAGAGAACTGATGCTGAGAAAGCTCTTCTTTACATGGACGGCGGTCAAATTGATGGGAATGTTGTGAAGTTGAGATTCACACTTGCACCACGGCAAAGGGCTTCTTCACCAATGAAGGCGCCTCCCCCTCCCCCAAAAAGAGATGTTCCTCATAATGAGAAAGGCGCTCCTAGTGCTGAAAAGGATGTGCAGCAGCGCAGGGAACCATCCCCACGAAGGAAGCCAGCTTCACCTCCACGCAAAAGAACTCCTCCAAACCGAAGGATTGAATCTCCCAGGCGGCAACCTGATCCATCTCCTAGGCGTCGTCCTGATTCTCCACCTATTCGTCGTCGAGCAGATGCTTCGCCTGTCAGGCGTGGTGACACACCTCCTCGTCGGAGACCAGGATCTCCAGTGAGAAGGCGTTCTCCCTCTCCACCACCTAGAAGGCGTAGATCACCAATGCGTCCTTCACCTAGGAGGCTTCGTGGAAGCCCATCACCACGCAGACGCTCCCCTGGGCCCATTAGACGGCGGTCACCACCACCACCCCCAAGGCGGCCAAGAAGCCCTCCTGGAAGAAGGCTACCACCTCCACGTCGTCATAGCCGTTCTCCCCCGCCTCGTCGTCCCCCTCATTCACGTTCCAGATCAATTTCTCCTCGAACGCGAGGACCTCCATTGAGGCGTGGAAGGTCTGATTCATCGTATTCTCGATCACCCAGTCCTCCAAGAAAGGGACCAAGAAGGGTATCAAGGAGCCGCACCCCCCCAAGGCATCGTAGAGGAAGAAGCATCTCTAGCGACAGCCGGAGCAGCAGCTCACCTTCCCCGAGGCGCAGGTAGAACTCCTGACATTGCGTTCCTGGCAGGTAAAACTTCTTTTGTTTCTTGACTATCACTATCGTTTGCCTGTGCTTGTGTCTTTCTGAGAGCTCAAGCGGTTGGTTTGAGGGGATACAGAGAACTCTGCTTAAAAGCTTTCCAGTTAATCTAGATTACCAGTGGAGTCTAGTCTGTGATCTGTAGTTGTCTACTCAGACTCTTGTTGGCATTGGTTATGTAGCTCTTCAGTATTATCTGTTCTAACTTCGTGACTCTTGCATTCCGAACCTGAATATTCTGTGGTGACACTTGTTCTTAATACTGTTATCGTTCGAAGAAGTTCCGACTTATGTTTGA - >LOC_Os01g72890.1
CCCCTCCCTCAGACGACCCCCGACCAAAACCCTAGCCCCCAAACCCGCCCATCGGTCGCCTCCGCCGCCGGAGACGATGGCGAAGCCGCGCCGCGGCCGCTCCGCCTCGCGCTCCTCCTCGGGATCCTCCTCTCGCTCGCCGTCCCGCTCCGCCTCCTCGGGCTCCGGCTCCTCCCGGTCGCGCTCCCGCTCCCGCTCCTTCTCGTCGTCGTCGTCCCCTTCACGGAGCCGCTCCCCACCCGCTGCCAAGGCCAGCTCACCTGGGGCACGGAGAGGTCGATCTCCTTCATCCCCTGCTAAGAGAGGATCGCCATCAAAGAAAGGGCGTTCACCATCACCACCACCACCTAAAAAGGCTTCACCTCCTAGGAAAGCATCTCCTGCTCCTGAATCAGTTGTTCTCCACATTGATCATTTGTCCAGGAATGTTAATGAAGCTCATTTGAAAGAGATATTCGGAAACTTTGGTGAAGTGGTTAACGTGGAGCTATCCATGGATCGAATGGTCAACCTTCCTCGTGGGTATGGATATATTGAGTTCAAGAAGAGAACTGATGCTGAGAAAGCTCTTCTTTACATGGACGGCGGTCAAATTGATGGGAATGTTGTGAAGTTGAGATTCACACTTGCACCACGGCAAAGGGCTTCTTCACCAATGAAGGCGCCTCCCCCTCCCCCAAAAAGAGATGTTCCTCATAATGAGAAAGGCGCTCCTAGTGCTGAAAAGGATGTGCAGCAGCGCAGGGAACCATCCCCACGAAGGAAGCCAGCTTCACCTCCACGCAAAAGAACTCCTCCAAACCGAAGGATTGAATCTCCCAGGCGGCAACCTGATCCATCTCCTAGGCGTCGTCCTGATTCTCCACCTATTCGTCGTCGAGCAGATGCTTCGCCTGTCAGGCGTGGTGACACACCTCCTCGTCGGAGACCAGGATCTCCAGTGAGAAGGCGTTCTCCCTCTCCACCACCTAGAAGGCGTAGATCACCAATGCGTCCTTCACCTAGGAGGCTTCGTGGAAGCCCATCACCACGCAGACGCTCCCCTGGGCCCATTAGACGGCGGTCACCACCACCACCCCCAAGGCGGCCAAGAAGCCCTCCTGGAAGAAGGCTACCACCTCCACGTCGTCATAGCCGTTCTCCCCCGCCTCGTCGTCCCCCTCATTCACGTTCCAGATCAATTTCTCCTCGAACGCGAGGACCTCCATTGAGGCGTGGAAGGTCTGATTCATCGTATTCTCGATCACCCAGTCCTCCAAGAAAGGGACCAAGAAGGGTATCAAGGAGCCGCACCCCCCCAAGGCATCGTAGAGGAAGAAGCATCTCTAGCGACAGCCGGAGCAGCAGCTCACCTTCCCCGAGGCGCAGGTAGAACTCCTGACATTGCGTTCCTGGCAGGTAAAACTTCTTTTGTTTCTTGACTATCACTATCGTTTGCCTGTGCTTGTGTCTTTCTGAGAGCTCAAGCGGTTGGTTTGAGGGGATACAGAGAACTCTGCTTAAAAGCTTTCCAGTTAATCTAGATTACCAGTGGAGTCTAGTCTGTGATCTGTAGTTGTCTACTCAGACTCTTGTTGGCATTGGTTATGTAGCTCTTCAGTATTATCTGTTCTAACTTCGTGACTCTTGCATTCCGAACCTGAATATTCTGTGGTGACACTTGTTCTTAATACTGTTATCGTTCGAAGAAGTTCCGACTTATGTTTGA
CDS Sequence
- >LOC_Os01g72890.2
ATGGCGAAGCCGCGCCGCGGCCGCTCCGCCTCGCGCTCCTCCTCGGGATCCTCCTCTCGCTCGCCGTCCCGCTCCGCCTCCTCGGGCTCCGGCTCCTCCCGGTCGCGCTCCCGCTCCCGCTCCTTCTCGTCGTCGTCGTCCCCTTCACGGAGCCGCTCCCCACCCGCTGCCAAGGCCAGCTCACCTGGGGCACGGAGAGGTCGATCTCCTTCATCCCCTGCTAAGAGAGGATCGCCATCAAAGAAAGGGCGTTCACCATCACCACCACCACCTAAAAAGGCTTCACCTCCTAGGAAAGCATCTCCTGCTCCTGAATCAGTTGTTCTCCACATTGATCATTTGTCCAGGAATGTTAATGAAGCTCATTTGAAAGAGATATTCGGAAACTTTGGTGAAGTGGTTAACGTGGAGCTATCCATGGATCGAATGGTCAACCTTCCTCGTGGGTATGGATATATTGAGTTCAAGAAGAGAACTGATGCTGAGAAAGCTCTTCTTTACATGGACGGCGGTCAAATTGATGGGAATGTTGTGAAGTTGAGATTCACACTTGCACCACGGCAAAGGGCTTCTTCACCAATGAAGGCGCCTCCCCCTCCCCCAAAAAGAGATGTTCCTCATAATGAGAAAGGCGCTCCTAGTGCTGAAAAGGATGTGCAGCAGCGCAGGGAACCATCCCCACGAAGGAAGCCAGCTTCACCTCCACGCAAAAGAACTCCTCCAAACCGAAGGATTGAATCTCCCAGGCGGCAACCTGATCCATCTCCTAGGCGTCGTCCTGATTCTCCACCTATTCGTCGTCGAGCAGATGCTTCGCCTGTCAGGCGTGGTGACACACCTCCTCGTCGGAGACCAGGATCTCCAGTGAGAAGGCGTTCTCCCTCTCCACCACCTAGAAGGCGTAGATCACCAATGCGTCCTTCACCTAGGAGGCTTCGTGGAAGCCCATCACCACGCAGACGCTCCCCTGGGCCCATTAGACGGCGGTCACCACCACCACCCCCAAGGCGGCCAAGAAGCCCTCCTGGAAGAAGGCTACCACCTCCACGTCGTCATAGCCGTTCTCCCCCGCCTCGTCGTCCCCCTCATTCACGTTCCAGATCAATTTCTCCTCGAACGCGAGGACCTCCATTGAGGCGTGGAAGGTCTGATTCATCGTATTCTCGATCACCCAGTCCTCCAAGAAAGGGACCAAGAAGGGTATCAAGGAGCCGCACCCCCCCAAGGCATCGTAGAGGAAGAAGCATCTCTAGCGACAGCCGGAGCAGCAGCTCACCTTCCCCGAGGCGCAGGTAG - >LOC_Os01g72890.1
ATGGCGAAGCCGCGCCGCGGCCGCTCCGCCTCGCGCTCCTCCTCGGGATCCTCCTCTCGCTCGCCGTCCCGCTCCGCCTCCTCGGGCTCCGGCTCCTCCCGGTCGCGCTCCCGCTCCCGCTCCTTCTCGTCGTCGTCGTCCCCTTCACGGAGCCGCTCCCCACCCGCTGCCAAGGCCAGCTCACCTGGGGCACGGAGAGGTCGATCTCCTTCATCCCCTGCTAAGAGAGGATCGCCATCAAAGAAAGGGCGTTCACCATCACCACCACCACCTAAAAAGGCTTCACCTCCTAGGAAAGCATCTCCTGCTCCTGAATCAGTTGTTCTCCACATTGATCATTTGTCCAGGAATGTTAATGAAGCTCATTTGAAAGAGATATTCGGAAACTTTGGTGAAGTGGTTAACGTGGAGCTATCCATGGATCGAATGGTCAACCTTCCTCGTGGGTATGGATATATTGAGTTCAAGAAGAGAACTGATGCTGAGAAAGCTCTTCTTTACATGGACGGCGGTCAAATTGATGGGAATGTTGTGAAGTTGAGATTCACACTTGCACCACGGCAAAGGGCTTCTTCACCAATGAAGGCGCCTCCCCCTCCCCCAAAAAGAGATGTTCCTCATAATGAGAAAGGCGCTCCTAGTGCTGAAAAGGATGTGCAGCAGCGCAGGGAACCATCCCCACGAAGGAAGCCAGCTTCACCTCCACGCAAAAGAACTCCTCCAAACCGAAGGATTGAATCTCCCAGGCGGCAACCTGATCCATCTCCTAGGCGTCGTCCTGATTCTCCACCTATTCGTCGTCGAGCAGATGCTTCGCCTGTCAGGCGTGGTGACACACCTCCTCGTCGGAGACCAGGATCTCCAGTGAGAAGGCGTTCTCCCTCTCCACCACCTAGAAGGCGTAGATCACCAATGCGTCCTTCACCTAGGAGGCTTCGTGGAAGCCCATCACCACGCAGACGCTCCCCTGGGCCCATTAGACGGCGGTCACCACCACCACCCCCAAGGCGGCCAAGAAGCCCTCCTGGAAGAAGGCTACCACCTCCACGTCGTCATAGCCGTTCTCCCCCGCCTCGTCGTCCCCCTCATTCACGTTCCAGATCAATTTCTCCTCGAACGCGAGGACCTCCATTGAGGCGTGGAAGGTCTGATTCATCGTATTCTCGATCACCCAGTCCTCCAAGAAAGGGACCAAGAAGGGTATCAAGGAGCCGCACCCCCCCAAGGCATCGTAGAGGAAGAAGCATCTCTAGCGACAGCCGGAGCAGCAGCTCACCTTCCCCGAGGCGCAGGTAG
Protein Sequence
- >LOC_Os01g72890.2
MAKPRRGRSASRSSSGSSSRSPSRSASSGSGSSRSRSRSRSFSSSSSPSRSRSPPAAKASSPGARRGRSPSSPAKRGSPSKKGRSPSPPPPKKASPPRKASPAPESVVLHIDHLSRNVNEAHLKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRTDAEKALLYMDGGQIDGNVVKLRFTLAPRQRASSPMKAPPPPPKRDVPHNEKGAPSAEKDVQQRREPSPRRKPASPPRKRTPPNRRIESPRRQPDPSPRRRPDSPPIRRRADASPVRRGDTPPRRRPGSPVRRRSPSPPPRRRRSPMRPSPRRLRGSPSPRRRSPGPIRRRSPPPPPRRPRSPPGRRLPPPRRHSRSPPPRRPPHSRSRSISPRTRGPPLRRGRSDSSYSRSPSPPRKGPRRVSRSRTPPRHRRGRSISSDSRSSSSPSPRRR* - >LOC_Os01g72890.1
MAKPRRGRSASRSSSGSSSRSPSRSASSGSGSSRSRSRSRSFSSSSSPSRSRSPPAAKASSPGARRGRSPSSPAKRGSPSKKGRSPSPPPPKKASPPRKASPAPESVVLHIDHLSRNVNEAHLKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRTDAEKALLYMDGGQIDGNVVKLRFTLAPRQRASSPMKAPPPPPKRDVPHNEKGAPSAEKDVQQRREPSPRRKPASPPRKRTPPNRRIESPRRQPDPSPRRRPDSPPIRRRADASPVRRGDTPPRRRPGSPVRRRSPSPPPRRRRSPMRPSPRRLRGSPSPRRRSPGPIRRRSPPPPPRRPRSPPGRRLPPPRRHSRSPPPRRPPHSRSRSISPRTRGPPLRRGRSDSSYSRSPSPPRKGPRRVSRSRTPPRHRRGRSISSDSRSSSSPSPRRR*