Information report for OsbHLH001;OsICE2
Gene Details
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Functional Descriptions
- In contrast to the proteins, cold stress had little or no effect on the expression of OsICE1 and OsICE2.
- Furthermore, we showed that both OsICE1 and OsICE2 physically interact with OsMYBS3, a single DNA-binding repeat MYB transcription factor that is essential for cold adaptation in rice, suggesting that OsICE1/OsICE2 and OsMYBS3 probably act through specific signal transduction mechanisms to coordinate cold tolerance in rice.
- Overexpression of OsICE1 and OsICE2 in Arabidopsis significantly enhanced the cold tolerance of Arabidopsis seedlings and improved the expression of cold-response genes.
Functional Keywords
Literature and News
- Overexpression of OrbHLH001, a putative helix-loop-helix transcription factor, causes increased expression of AKT1 and maintains ionic balance under salt stress in rice . DOI: 10.1016/j.jplph.2012.08.019 ; PMID: 23083684
- Rice homologs of inducer of CBF expression OsICE are involved in cold acclimation . DOI: 10.5511/plantbiotechnology.11.0421a
- Overexpression of a homopeptide repeat-containing bHLH protein gene (OrbHLH001) from Dongxiang Wild Rice confers freezing and salt tolerance in transgenic Arabidopsis . DOI: 10.1007/s00299-010-0883-z ; PMID: 20559833
- The rice transcription factors OsICE confer enhanced cold tolerance in transgenic Arabidopsis . DOI: 10.1080/15592324.2017.1316442 ; PMID: 28414264
- Multiple transcriptional factors control stomata development in rice . DOI: 10.1111/nph.15766 ; PMID: 30825332
- RSD1 Is Essential for Stomatal Patterning and Files in Rice . DOI: 10.3389/fpls.2020.600021 ; PMID: 33329664
- Antagonistic control of seed dormancy in rice by two bHLH transcription factors . DOI: 10.1038/s41588-022-01240-7 ; PMID: 36471073
Gene Resources
- UniProt: Q0JGE2
- EMBL: AP004330, AP004332, AP008207
- EnsemblPlants: Os01t0928000-01
- Gramene: Os01t0928000-01
- KEGG: dosa:Os01g0928000, osa:4326959
- Orthologous matrix: AMRTDEM
- InterPro: IPR011598, IPR036638, IPR051358
- PANTHER: PTHR31945, PTHR31945:SF129
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- SWISS-MODEL: Q0JGE2
- Conserved Domain Database: cd04873, cd11443
Sequences
cDNA Sequence
- >LOC_Os01g70310.1
GGACTCCTCTTCTCTTCTCTTCTCTTCTCAGAGCGCTGCGAGGTTGCCATGGACGAGGCGGAGGCGGCGGCGGCGGCGGCGAAGATGGACGAGCTGGCGGGAGGAGGAGGAGGAGGCGGCGGCGACTGGTCGTACCTCGCGGCGGACGCGCTGGCGGCGGCGTCGTTCACGGCGTTCCCGTTCCACCACCACCACCACCACCACCACCGCGACGTGCTCTCGGCGTCGACCCCGTCGTCGCTGCTCCTCAACATGGACGCGGCCACCGCCGCGGCCATGTTCGACTTCCAGGCGGCCTTCCCGTCGTCCTCCGTCCCGCCGCCGCCGCCCACGACGACGGCGGCGCTCCCGCCGTTCCACGACTTCGCCTCCTCCAACCCGTTCGACGACGCGCCGCCCCCGTTCCTCGCGCCGCCGGGGCAGAAGCTCGGGTTCCTGGGGCCCCCCGGCGGCGCGTTCGGCGGCGGGATGGGGTGGGACGACGACGACGAGATCGAGCAGAGCGTGGACGCCTCGTCCATGGGTGTCTCGGCCTCGCTGGAGAATGCCGCGCCCGTGGCGGCCGGAGGAGGCGGCGGCGGTGGCGGCGGCGGTGGGAGGGGCAAGAAGAAGGGGATGCCGGCCAAGAACCTCATGGCGGAGCGGCGGCGCAGGAAGAAGCTCAACGACCGCCTCTACATGCTGCGCTCCGTGGTGCCCAAGATCAGCAAGATGGACAGAGCTTCTATCCTTGGTGATGCAATTGAGTACTTGAAGGAGCTCCTGCAGAGGATTAACGATCTTCACAATGAACTTGAGTCTGCTCCTAGCTCTTCGCTTACTGGACCATCATCGGCTAGCTTCCACCCATCAACACCCACATTGCAGACGTTTCCTGGCCGCGTTAAGGAGGAACTTTGCCCAACCTCATTTCCAAGCCCTAGTGGTCAACAAGCCACGGTCGAAGTTAGGATGAGGGAAGGTCATGCAGTCAATATCCACATGTTCTGCGCACGCAGGCCCGGCATTCTGATGTCCACATTGAGGGCTCTCGACAGCCTTGGCCTCGGGATCGAGCAGGCGGTCATCAGCTGTTTCAATGGGTTTGCAATGGATGTTTTCCGCGCCGAGCAATGCAGGGATGGTCCTGGACTCGGGCCTGAAGAAATTAAGACCGTGCTCCTGCACTCTGCTGGCCTTCAGAACGCAATGTAATCAGCAAGTCAGAAAGCAGTCAAGACCAATGCACTGGGATTTGATCAGTGATCATTTGCATCAGATGATCTGGTTTATCAAAAAGTTATAGTAAGTATGGCATATATGCTGTTTATCTAGGAGAACTGATGAGATGAGGCTCGCCATCTAGAGACATGTGTGATGATGATGATGTAACTGGGTTTCTTTCTTTCTGTTGTCGTTTTTTTTTCTGAATGTTGTTTGTGATGTAATAGGATCTTTGTCCATTGAAACCATGTCCATTATCATGATGAGAATATGAACCCAGTGTCTTTTGAATGAATTCCATGACATCGATCATGCAGACACACACAGCTTGATGCACAATAAAGAAGCTTATGCACAAGA - >LOC_Os01g70310.2
GGACTCCTCTTCTCTTCTCTTCTCTTCTCAGAGCGCTGCGAGGTTGCCATGGACGAGGCGGAGGCGGCGGCGGCGGCGGCGAAGATGGACGAGCTGGCGGGAGGAGGAGGAGGAGGCGGCGGCGACTGGTCGTACCTCGCGGCGGACGCGCTGGCGGCGGCGTCGTTCACGGCGTTCCCGTTCCACCACCACCACCACCACCACCACCGCGACGTGCTCTCGGCGTCGACCCCGTCGTCGCTGCTCCTCAACATGGACGCGGCCACCGCCGCGGCCATGTTCGACTTCCAGGCGGCCTTCCCGTCGTCCTCCGTCCCGCCGCCGCCGCCCACGACGACGGCGGCGCTCCCGCCGTTCCACGACTTCGCCTCCTCCAACCCGTTCGACGACGCGCCGCCCCCGTTCCTCGCGCCGCCGGGGCAGAAGCTCGGGTTCCTGGGGCCCCCCGGCGGCGCGTTCGGCGGCGGGATGGGGTGGGACGACGACGACGAGATCGAGCAGAGCGTGGACGCCTCGTCCATGGGTGTCTCGGCCTCGCTGGAGAATGCCGCGCCCGTGGCGGCCGGAGGAGGCGGCGGCGGTGGCGGCGGCGGTGGGAGGGGCAAGAAGAAGGGGATGCCGGCCAAGAACCTCATGGCGGAGCGGCGGCGCAGGAAGAAGCTCAACGACCGCCTCTACATGCTGCGCTCCGTGGTGCCCAAGATCAGCAAGATGGACAGAGCTTCTATCCTTGGTGATGCAATTGAGTACTTGAAGGAGCTCCTGCAGAGGATTAACGATCTTCACAATGAACTTGAGTCTGCTCCTAGCTCTTCGCTTACTGGACCATCATCGGCTAGCTTCCACCCATCAACACCCACATTGCAGACGTTTCCTGGCCGCGTTAAGGAGGAACTTTGCCCAACCTCATTTCCAAGCCCTAGTGGTCAACAAGCCACGGTCGAAGTTAGGATGAGGGAAGGTCATGCAGTCAATATCCACATGTTCTGCGCACGCAGGCCCGGCATTCTGATGTCCACATTGAGGGCTCTCGACAGCCTTGGCCTCGGGATCGAGCAGGCGGTCATCAGCTGTTTCAATGGGTTTGCAATGGATGTTTTCCGCGCCGAGCAATGCAGGGATGGTCCTGGACTCGGGCCTGAAGAAATTAAGACCGTGCTCCTGCACTCTGCTGGCCTTCAGAACGCAATGTAATCAGCAAGTCAGAAAGCAGTCAAGACCAATGCACTGGGATTTGATCAGTGATCATTTGCATCAGATGATCTGGTTTATCAAAAAGTTATAGTAAGTATGGCATATATGCTGTTTATCTAGGAGAACTGATGAGATGAGGCTCGCCATCTAGAGACATGTGTGATGATGATGATGTAACTGGGTTTCTTTCTTTCTGTTGTCGTTTTTTTTTCTGAATGTTGTTTGTGATGTAATAGGATCTTTGTCCATTGAAACCATGTCCATTATCATGATGAGAATATGAACCCAGTGTCTTTTGAATGAATTCCATGACATCGATCATGCAGACACACACAGCTTGATGCACAATAAAGAAGCTTATGCACAAGA
CDS Sequence
- >LOC_Os01g70310.1
ATGGACGAGGCGGAGGCGGCGGCGGCGGCGGCGAAGATGGACGAGCTGGCGGGAGGAGGAGGAGGAGGCGGCGGCGACTGGTCGTACCTCGCGGCGGACGCGCTGGCGGCGGCGTCGTTCACGGCGTTCCCGTTCCACCACCACCACCACCACCACCACCGCGACGTGCTCTCGGCGTCGACCCCGTCGTCGCTGCTCCTCAACATGGACGCGGCCACCGCCGCGGCCATGTTCGACTTCCAGGCGGCCTTCCCGTCGTCCTCCGTCCCGCCGCCGCCGCCCACGACGACGGCGGCGCTCCCGCCGTTCCACGACTTCGCCTCCTCCAACCCGTTCGACGACGCGCCGCCCCCGTTCCTCGCGCCGCCGGGGCAGAAGCTCGGGTTCCTGGGGCCCCCCGGCGGCGCGTTCGGCGGCGGGATGGGGTGGGACGACGACGACGAGATCGAGCAGAGCGTGGACGCCTCGTCCATGGGTGTCTCGGCCTCGCTGGAGAATGCCGCGCCCGTGGCGGCCGGAGGAGGCGGCGGCGGTGGCGGCGGCGGTGGGAGGGGCAAGAAGAAGGGGATGCCGGCCAAGAACCTCATGGCGGAGCGGCGGCGCAGGAAGAAGCTCAACGACCGCCTCTACATGCTGCGCTCCGTGGTGCCCAAGATCAGCAAGATGGACAGAGCTTCTATCCTTGGTGATGCAATTGAGTACTTGAAGGAGCTCCTGCAGAGGATTAACGATCTTCACAATGAACTTGAGTCTGCTCCTAGCTCTTCGCTTACTGGACCATCATCGGCTAGCTTCCACCCATCAACACCCACATTGCAGACGTTTCCTGGCCGCGTTAAGGAGGAACTTTGCCCAACCTCATTTCCAAGCCCTAGTGGTCAACAAGCCACGGTCGAAGTTAGGATGAGGGAAGGTCATGCAGTCAATATCCACATGTTCTGCGCACGCAGGCCCGGCATTCTGATGTCCACATTGAGGGCTCTCGACAGCCTTGGCCTCGGGATCGAGCAGGCGGTCATCAGCTGTTTCAATGGGTTTGCAATGGATGTTTTCCGCGCCGAGCAATGCAGGGATGGTCCTGGACTCGGGCCTGAAGAAATTAAGACCGTGCTCCTGCACTCTGCTGGCCTTCAGAACGCAATGTAA - >LOC_Os01g70310.2
ATGGACGAGGCGGAGGCGGCGGCGGCGGCGGCGAAGATGGACGAGCTGGCGGGAGGAGGAGGAGGAGGCGGCGGCGACTGGTCGTACCTCGCGGCGGACGCGCTGGCGGCGGCGTCGTTCACGGCGTTCCCGTTCCACCACCACCACCACCACCACCACCGCGACGTGCTCTCGGCGTCGACCCCGTCGTCGCTGCTCCTCAACATGGACGCGGCCACCGCCGCGGCCATGTTCGACTTCCAGGCGGCCTTCCCGTCGTCCTCCGTCCCGCCGCCGCCGCCCACGACGACGGCGGCGCTCCCGCCGTTCCACGACTTCGCCTCCTCCAACCCGTTCGACGACGCGCCGCCCCCGTTCCTCGCGCCGCCGGGGCAGAAGCTCGGGTTCCTGGGGCCCCCCGGCGGCGCGTTCGGCGGCGGGATGGGGTGGGACGACGACGACGAGATCGAGCAGAGCGTGGACGCCTCGTCCATGGGTGTCTCGGCCTCGCTGGAGAATGCCGCGCCCGTGGCGGCCGGAGGAGGCGGCGGCGGTGGCGGCGGCGGTGGGAGGGGCAAGAAGAAGGGGATGCCGGCCAAGAACCTCATGGCGGAGCGGCGGCGCAGGAAGAAGCTCAACGACCGCCTCTACATGCTGCGCTCCGTGGTGCCCAAGATCAGCAAGATGGACAGAGCTTCTATCCTTGGTGATGCAATTGAGTACTTGAAGGAGCTCCTGCAGAGGATTAACGATCTTCACAATGAACTTGAGTCTGCTCCTAGCTCTTCGCTTACTGGACCATCATCGGCTAGCTTCCACCCATCAACACCCACATTGCAGACGTTTCCTGGCCGCGTTAAGGAGGAACTTTGCCCAACCTCATTTCCAAGCCCTAGTGGTCAACAAGCCACGGTCGAAGTTAGGATGAGGGAAGGTCATGCAGTCAATATCCACATGTTCTGCGCACGCAGGCCCGGCATTCTGATGTCCACATTGAGGGCTCTCGACAGCCTTGGCCTCGGGATCGAGCAGGCGGTCATCAGCTGTTTCAATGGGTTTGCAATGGATGTTTTCCGCGCCGAGCAATGCAGGGATGGTCCTGGACTCGGGCCTGAAGAAATTAAGACCGTGCTCCTGCACTCTGCTGGCCTTCAGAACGCAATGTAA
Protein Sequence
- >LOC_Os01g70310.1
MDEAEAAAAAAKMDELAGGGGGGGGDWSYLAADALAAASFTAFPFHHHHHHHHRDVLSASTPSSLLLNMDAATAAAMFDFQAAFPSSSVPPPPPTTTAALPPFHDFASSNPFDDAPPPFLAPPGQKLGFLGPPGGAFGGGMGWDDDDEIEQSVDASSMGVSASLENAAPVAAGGGGGGGGGGGRGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESAPSSSLTGPSSASFHPSTPTLQTFPGRVKEELCPTSFPSPSGQQATVEVRMREGHAVNIHMFCARRPGILMSTLRALDSLGLGIEQAVISCFNGFAMDVFRAEQCRDGPGLGPEEIKTVLLHSAGLQNAM* - >LOC_Os01g70310.2
MDEAEAAAAAAKMDELAGGGGGGGGDWSYLAADALAAASFTAFPFHHHHHHHHRDVLSASTPSSLLLNMDAATAAAMFDFQAAFPSSSVPPPPPTTTAALPPFHDFASSNPFDDAPPPFLAPPGQKLGFLGPPGGAFGGGMGWDDDDEIEQSVDASSMGVSASLENAAPVAAGGGGGGGGGGGRGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESAPSSSLTGPSSASFHPSTPTLQTFPGRVKEELCPTSFPSPSGQQATVEVRMREGHAVNIHMFCARRPGILMSTLRALDSLGLGIEQAVISCFNGFAMDVFRAEQCRDGPGLGPEEIKTVLLHSAGLQNAM*