Information report for SDG714
Gene Details
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Functional Descriptions
- Loss-of-function mutants of SDG714 (SDG714IR transformants) generated by RNA interference display a mostly glabrous phenotype as a result of the lack of macro trichomes in glumes, leaves, and culms compared with control plants.
- Overexpression of YFP-SDG714 in Arabidopsis significantly inhibits plant growth and this inhibition is associated with an enhanced level of H3K9 dimethylation.
- Our microarray results show that many genes essential for the plant growth and development were downregulated in transgenic Arabidopsis plants overexpressing YFP-SDG714.
- Most interestingly, when YFP-SDG714 production is stopped, the inhibited plants can partially restore their growth, suggesting that the perturbation of gene expression caused by YFP-SDG714 is revertible.
- Taken together, our results point to an important role of SDG714 in H3K9 dimethylation, suppression of gene expression and plant growth, and provide a potential method to regulate gene expression and plant development by an on-off switch of SDG714 expression.
- SDG714 regulates specific gene expression and consequently affects plant growth via H3K9 dimethylation.
Literature and News
- SDG714 regulates specific gene expression and consequently affects plant growth via H3K9 dimethylation . DOI: 10.1111/j.1744-7909.2010.00927.x ; PMID: 20377704
- Rice SUVH histone methyltransferase genes display specific functions in chromatin modification and retrotransposon repression . DOI: 10.1093/mp/ssq030 ; PMID: 20566579
- SDG714, a histone H3K9 methyltransferase, is involved in Tos17 DNA methylation and transposition in rice . DOI: 10.1105/tpc.106.048124 ; PMID: 17259261
Gene Resources
- UniProt: A0A0P0VCD6
- EMBL: AP004332, AP008207
- AlphaFoldDB: A0A0P0VCD6
- EnsemblPlants: Os01t0927000-01
- Gramene: Os01t0927000-01
- KEGG: dosa:Os01g0927000, osa:4326952
- Orthologous matrix: NGCDCEG
- InterPro: IPR001214, IPR003105, IPR003616
- PANTHER: PTHR45660, PTHR45660:SF88
- SUPFAM: SSF82199, SSF88697
- PROSITE: PS50280, PS50867, PS50868
- Gene3D: 2.170.270.10, 2.30.280.10
- OrthoDB: A0A0P0VCD6
- SWISS-MODEL: A0A0P0VCD6
Sequences
cDNA Sequence
- >LOC_Os01g70220.1
AGCGCAGCCATCTCGCGTGCTATTTTGCTCTGCTCGCTCGCTCGCTCGTCTCCACACCTTCTCCTCCTCCTCCCACACTGCTGCGCGGCCGCCGCCGCCGCCGCCGCCTTCCGCATCGTCGCCGTCGATTTTGCGGAGCTCCAGTGGATGGAGGTGATGGATTCGGTGGCCGTGATGGAGGTCTCGCCGGTGCCGAAGCCGCCACTGGAGGCGGCGCTTGCGCTGCGCCGCAGCGTTCGGTGCTTGAACAGGACGCGCCGTCCCACTTACGTGGAGCAGGAGGAGCCCAAGGAGAGTGCTGGCCGGCGGCGCGGCGGCAAGAGGAAGCGGGAAGAGGAGAAGAAGGAGCCGGTGGCGCAGCACGCCATGAAGCCGGTCAGGATGGGCGATGCAGCCTCGGAGAGGAAGCCCTCCTCGGAGGGGAAGCCGATGCCCGCAATTGCGGCGGAGCCGGTTTCTTGTGCCGGGTTCGCACGACCTGCTGCCGAGGATGATGTCCTTGGCAACGGGAAGAGTGCGAAACTGCGGGTGAAGGAAACCTTGAGGGCATTCACCAGCCATTACCTTCACCTTGTCCAGGAGGAGCAGAAAAGAGCACAAGCGGTGTTACAGGAAGGCCAGAAGCGTCCATCAAAGCGGCCTGACTTGAAAGCCATTACAAAGATGCAAGAAAGCAATGCCGTGCTTTATCCAGAGAAGATAATAGGGGAACTACCTGGTGTTGATGTTGGGGATCAATTTTATTCTCGTGCCGAGATGGTTGTTTTGGGCATTCATAGTCATTGGCTGAATGGCATTGATTATATGGGAATGAAATATCAGGGAAAGGAGGAGTATGCAAACCTAACTTTCCCACTGGCAACTTGTATTGTCATGTCGGGAATATATGAAGATGATCTTGATAAGGCAGATGAAATTATTTATACTGGTCAAGGAGGAAATGATTTACTCGGTAATCATCGCCAAATTGGCTCTCAACAACTGCAACGTGGAAATTTGGCATTGAAGAACAGTAAGGATAATGGCAATCCCATAAGAGTTATCCGAGGACATATATCAAAGAATAGCTACACTGGGAAGGTCTACACCTATGATGGGCTGTACAAGGTTGTAGATGACTGGGTGCAGAATGGAGTACAAGGGCACGTTGTTTTCAAATATAAATTAAAGCGGCTTGAGGGACAGCCATCACTGACAACTTCTGAGGTCCGATTTACTCGTGCTGAAGCTCCCACCACGATTTCGGAATTACCTGGGTTGGTTTGTGATGACATATCTGGTGGGCAGGAGAATCTTCCTATTCCTGCTACTAATTTGGTTGATGACCCACCTGTTCCTCCAACTGGTTTTGTGTACTCCAAATCTCTAAAAATTCCAAAGGGCATCAAGATTCCATCTTATTGTAATGGCTGTGACTGTGAAGGAGATTGCGCAAACAACAAAAACTGCTCATGCGCGCAGCGCAATGGTTCTGATTTACCTTATGTATCACACAAGAACATTGGCAGGTTGGTGGAGCCCAAAGCTATTGTATTTGAATGTGGTGCTAATTGCAGCTGCAACAACAACTGTGTAAATAGAACATCTCAGAAAGGTCTGCAGTATCGCTTGGAGGTATTTAAGACAGCTTCAAAAGGCTGGGGTGTCAGGACTTGGGATACTATCCTCCCTGGGGCTCCCATCTGTGAGTACACTGGTGTGCTGAGGAGGACTGAAGAAGTAGATGGTTTGCTGCAGAACAATTACATATTTGATATTGATTGTCTTCAAACTATGAAGGGTCTGGATGGAAGAGAGAAAAGGGCTGGCTCTGACATGCATCTGCCGTCTCTTCATGCGGAGAATGATTCAGATCCACCTGCACCAGAGTATTGCATTGATGCTGGCTCTATTGGCAACTTTGCAAGGTTTATAAACCACAGCTGCGAGCCTAACCTTTTTGTCCAGTGTGTCTTGAGCTCCCATAATGATGTTAAGCTGGCAAAGGTGACGCTCTTTGCTGCTGACACTATACTTCCTCTTCAGGAGCTTTCATATGATTATGGCTATGTCTTGGACAGTGTTGTTGGGCCTGATGGAAATATTGTCAAGCTGCCTTGCTTCTGTGGTGCACCGTACTGCCGGAAGCGACTTTATTAGATCTGCACCTGTTTGCATCTATTTGGAATATGAACCACTCTAAACTATAATATATAGTAGTATATGTATTCAGTGCCAGGCGTGTAAATGGCATGCTGGAAACACTATGATATTTTGCAGAAGATGAGCATTCTGATTTTTTTGTAGAGGTCATGTTGGAGATGCTATGATATTTAGCAAAAGAATAGCATTCTATTTTTGTGTAGAGAACATGCTATGATATCTTATAAACAATTAACCTATATATCTAAGTGCTGATTTAACCCTCA
CDS Sequence
- >LOC_Os01g70220.1
ATGGAGGTGATGGATTCGGTGGCCGTGATGGAGGTCTCGCCGGTGCCGAAGCCGCCACTGGAGGCGGCGCTTGCGCTGCGCCGCAGCGTTCGGTGCTTGAACAGGACGCGCCGTCCCACTTACGTGGAGCAGGAGGAGCCCAAGGAGAGTGCTGGCCGGCGGCGCGGCGGCAAGAGGAAGCGGGAAGAGGAGAAGAAGGAGCCGGTGGCGCAGCACGCCATGAAGCCGGTCAGGATGGGCGATGCAGCCTCGGAGAGGAAGCCCTCCTCGGAGGGGAAGCCGATGCCCGCAATTGCGGCGGAGCCGGTTTCTTGTGCCGGGTTCGCACGACCTGCTGCCGAGGATGATGTCCTTGGCAACGGGAAGAGTGCGAAACTGCGGGTGAAGGAAACCTTGAGGGCATTCACCAGCCATTACCTTCACCTTGTCCAGGAGGAGCAGAAAAGAGCACAAGCGGTGTTACAGGAAGGCCAGAAGCGTCCATCAAAGCGGCCTGACTTGAAAGCCATTACAAAGATGCAAGAAAGCAATGCCGTGCTTTATCCAGAGAAGATAATAGGGGAACTACCTGGTGTTGATGTTGGGGATCAATTTTATTCTCGTGCCGAGATGGTTGTTTTGGGCATTCATAGTCATTGGCTGAATGGCATTGATTATATGGGAATGAAATATCAGGGAAAGGAGGAGTATGCAAACCTAACTTTCCCACTGGCAACTTGTATTGTCATGTCGGGAATATATGAAGATGATCTTGATAAGGCAGATGAAATTATTTATACTGGTCAAGGAGGAAATGATTTACTCGGTAATCATCGCCAAATTGGCTCTCAACAACTGCAACGTGGAAATTTGGCATTGAAGAACAGTAAGGATAATGGCAATCCCATAAGAGTTATCCGAGGACATATATCAAAGAATAGCTACACTGGGAAGGTCTACACCTATGATGGGCTGTACAAGGTTGTAGATGACTGGGTGCAGAATGGAGTACAAGGGCACGTTGTTTTCAAATATAAATTAAAGCGGCTTGAGGGACAGCCATCACTGACAACTTCTGAGGTCCGATTTACTCGTGCTGAAGCTCCCACCACGATTTCGGAATTACCTGGGTTGGTTTGTGATGACATATCTGGTGGGCAGGAGAATCTTCCTATTCCTGCTACTAATTTGGTTGATGACCCACCTGTTCCTCCAACTGGTTTTGTGTACTCCAAATCTCTAAAAATTCCAAAGGGCATCAAGATTCCATCTTATTGTAATGGCTGTGACTGTGAAGGAGATTGCGCAAACAACAAAAACTGCTCATGCGCGCAGCGCAATGGTTCTGATTTACCTTATGTATCACACAAGAACATTGGCAGGTTGGTGGAGCCCAAAGCTATTGTATTTGAATGTGGTGCTAATTGCAGCTGCAACAACAACTGTGTAAATAGAACATCTCAGAAAGGTCTGCAGTATCGCTTGGAGGTATTTAAGACAGCTTCAAAAGGCTGGGGTGTCAGGACTTGGGATACTATCCTCCCTGGGGCTCCCATCTGTGAGTACACTGGTGTGCTGAGGAGGACTGAAGAAGTAGATGGTTTGCTGCAGAACAATTACATATTTGATATTGATTGTCTTCAAACTATGAAGGGTCTGGATGGAAGAGAGAAAAGGGCTGGCTCTGACATGCATCTGCCGTCTCTTCATGCGGAGAATGATTCAGATCCACCTGCACCAGAGTATTGCATTGATGCTGGCTCTATTGGCAACTTTGCAAGGTTTATAAACCACAGCTGCGAGCCTAACCTTTTTGTCCAGTGTGTCTTGAGCTCCCATAATGATGTTAAGCTGGCAAAGGTGACGCTCTTTGCTGCTGACACTATACTTCCTCTTCAGGAGCTTTCATATGATTATGGCTATGTCTTGGACAGTGTTGTTGGGCCTGATGGAAATATTGTCAAGCTGCCTTGCTTCTGTGGTGCACCGTACTGCCGGAAGCGACTTTATTAG
Protein Sequence
- >LOC_Os01g70220.1
MEVMDSVAVMEVSPVPKPPLEAALALRRSVRCLNRTRRPTYVEQEEPKESAGRRRGGKRKREEEKKEPVAQHAMKPVRMGDAASERKPSSEGKPMPAIAAEPVSCAGFARPAAEDDVLGNGKSAKLRVKETLRAFTSHYLHLVQEEQKRAQAVLQEGQKRPSKRPDLKAITKMQESNAVLYPEKIIGELPGVDVGDQFYSRAEMVVLGIHSHWLNGIDYMGMKYQGKEEYANLTFPLATCIVMSGIYEDDLDKADEIIYTGQGGNDLLGNHRQIGSQQLQRGNLALKNSKDNGNPIRVIRGHISKNSYTGKVYTYDGLYKVVDDWVQNGVQGHVVFKYKLKRLEGQPSLTTSEVRFTRAEAPTTISELPGLVCDDISGGQENLPIPATNLVDDPPVPPTGFVYSKSLKIPKGIKIPSYCNGCDCEGDCANNKNCSCAQRNGSDLPYVSHKNIGRLVEPKAIVFECGANCSCNNNCVNRTSQKGLQYRLEVFKTASKGWGVRTWDTILPGAPICEYTGVLRRTEEVDGLLQNNYIFDIDCLQTMKGLDGREKRAGSDMHLPSLHAENDSDPPAPEYCIDAGSIGNFARFINHSCEPNLFVQCVLSSHNDVKLAKVTLFAADTILPLQELSYDYGYVLDSVVGPDGNIVKLPCFCGAPYCRKRLY*