Information report for OsIRX10
Gene Details
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Functional Descriptions
- Inactivation of OsIRX10 leads to decreased xylan content in rice culm cell walls and improved biomass saccharification.
Literature and News
Gene Resources
- UniProt: Q8S1X7
- EMBL: AP003262, AP004332, AP008207
- AlphaFoldDB: Q8S1X7
- EnsemblPlants: Os01t0926700-01
- Gramene: Os01t0926700-01
- KEGG: dosa:Os01g0926700
- InterPro: IPR004263, IPR040911
- PANTHER: PTHR11062, PTHR11062:SF200
- OrthoDB: Q8S1X7
- eggNOG: KOG1021
Homologs
- Arabidopsis thaliana: AT2G28110
- Brassica napus: GSBRNA2T00065348001
- Brassica oleracea: Bo2g013340
- Daucus carota: DCAR_004472
- Gossypium hirsutum: GhGT47B_A13, GhGT47B_D13
Sequences
cDNA Sequence
- >LOC_Os01g70200.1
CTTGAAGCCTGCTTATATGTGGAGTTGGAGGAAGAAGGAAGGAAGCCTAGGAAAGCCTCCCCTCACCTTCTCAACTCACCAAACGCTTCTTGGTAGGAGAATTGCCAGAAAAGTTTCCCCCTTCTCCTTGGATCCTTTAATTACCTCCTGGCAATTGCCTGCTAGCTCATAAGGCCGGACAGGGAGAGGGTTGGAGAGGAGAGGAGACACAGGTGCTGGGAAGAGGCCTGTGGGGATCAAGAAGATGAGGAGGTGGGTCTTGGCCATTGCCATTCTTGCTGCTGCTGTATGCTTCTTCCTTGGAGCTCAGGCCCAGGAGGTGCGGCAGGGCCACCAGACAGAGAGGATCTCAGGAAGTGCTGGTGATGTGTTGGAAGATGACCCTGTTGGGAGGCTTAAGGTCTATGTCTATGATCTCCCAAGCAAGTACAACAAGAAGCTGCTGAAGAAGGATCCTAGGTGCCTGAACCACATGTTTGCCGCTGAGATTTTCATGCATCGGTTCCTGTTGTCAAGCGCTGTCCGAACTTTTAATCCCGAGGAAGCTGATTGGTTCTACACACCGGTGTACACTACATGCGACCTGACTCCCTCCGGTCTTCCCTTGCCCTTCAAATCCCCAAGAATGATGCGCAGCGCAATTGAGCTGATTGCAACAAATTGGCCTTACTGGAATAGATCAGAGGGGGCTGATCATTTCTTTGTTACACCACATGACTTTGGCGCTTGCTTCCACTATCAGGAAGAAAAGGCAATTGGACGTGGAATCCTCCCATTGCTTCAGCGTGCCACCCTGGTTCAGACCTTTGGACAAAAGAACCATGTCTGCTTGAAGGACGGCTCGATCACCATTCCGCCATATGCACCCCCACAGAAAATGCAGGCTCATCTTATTCCCCCAGACACCCCTCGGTCTATCTTTGTATATTTCCGTGGTCTGTTCTACGATACCAGCAATGATCCTGAGGGTGGATACTATGCAAGAGGTGCCCGCGCGTCGGTTTGGGAGAATTTCAAGAACAACCCGCTGTTTGACATCTCAACCGATCACCCACCCACGTACTACGAAGATATGCAGAGATCTGTGTTCTGCTTGTGCCCATTGGGCTGGGCTCCATGGAGCCCCAGACTGGTGGAAGCTGTGGTTTTCGGTTGTATTCCGGTGATCATTGCAGATGACATTGTCCTCCCCTTTGCTGATGCTATCCCCTGGGAGGAGATTGGCGTGTTTGTCGCCGAGGAGGATGTTCCGAAGCTGGACAGTATCCTGACATCCATACCAACAGATGTTATCCTGAGGAAGCAGAGGCTTCTCGCGAACCCGTCGATGAAGCAGGCCATGCTGTTCCCCCAGCCTGCTCAGGCAGGAGATGCATTCCATCAGATACTGAATGGTCTCGCTCGCAAGCTTCCACATGGCGAAAACGTCTTCTTGAAGCCCGGGGAGAGGGCCCTGAACTGGACTGCTGGACCGGTGGGCGACCTGAAGCCTTGGTAGCATGCATCTCACTGCCTATAGAAATGTAAAAACTTTTTTGAAAAAGATATATTTACAGACATGATATATACTTGCGCCTTGAGATCACCATGGTTGCATAGTGCTGACCATAAATCAACAAATGTACATTTTTTTGTATCTTTTTCCCTGATAGCTATATACCATATATCTTCATTCCTTTTCTTCCCATTAGCGGATGAAATGCCGGCATTTGTCCGCTTTGTCCATATATGTGGATAACTGGATATCATAATGAAATTATGAGATTTAATTCATGCTGAATGCGTGACATAATTTCAAATGTGG
CDS Sequence
- >LOC_Os01g70200.1
ATGAGGAGGTGGGTCTTGGCCATTGCCATTCTTGCTGCTGCTGTATGCTTCTTCCTTGGAGCTCAGGCCCAGGAGGTGCGGCAGGGCCACCAGACAGAGAGGATCTCAGGAAGTGCTGGTGATGTGTTGGAAGATGACCCTGTTGGGAGGCTTAAGGTCTATGTCTATGATCTCCCAAGCAAGTACAACAAGAAGCTGCTGAAGAAGGATCCTAGGTGCCTGAACCACATGTTTGCCGCTGAGATTTTCATGCATCGGTTCCTGTTGTCAAGCGCTGTCCGAACTTTTAATCCCGAGGAAGCTGATTGGTTCTACACACCGGTGTACACTACATGCGACCTGACTCCCTCCGGTCTTCCCTTGCCCTTCAAATCCCCAAGAATGATGCGCAGCGCAATTGAGCTGATTGCAACAAATTGGCCTTACTGGAATAGATCAGAGGGGGCTGATCATTTCTTTGTTACACCACATGACTTTGGCGCTTGCTTCCACTATCAGGAAGAAAAGGCAATTGGACGTGGAATCCTCCCATTGCTTCAGCGTGCCACCCTGGTTCAGACCTTTGGACAAAAGAACCATGTCTGCTTGAAGGACGGCTCGATCACCATTCCGCCATATGCACCCCCACAGAAAATGCAGGCTCATCTTATTCCCCCAGACACCCCTCGGTCTATCTTTGTATATTTCCGTGGTCTGTTCTACGATACCAGCAATGATCCTGAGGGTGGATACTATGCAAGAGGTGCCCGCGCGTCGGTTTGGGAGAATTTCAAGAACAACCCGCTGTTTGACATCTCAACCGATCACCCACCCACGTACTACGAAGATATGCAGAGATCTGTGTTCTGCTTGTGCCCATTGGGCTGGGCTCCATGGAGCCCCAGACTGGTGGAAGCTGTGGTTTTCGGTTGTATTCCGGTGATCATTGCAGATGACATTGTCCTCCCCTTTGCTGATGCTATCCCCTGGGAGGAGATTGGCGTGTTTGTCGCCGAGGAGGATGTTCCGAAGCTGGACAGTATCCTGACATCCATACCAACAGATGTTATCCTGAGGAAGCAGAGGCTTCTCGCGAACCCGTCGATGAAGCAGGCCATGCTGTTCCCCCAGCCTGCTCAGGCAGGAGATGCATTCCATCAGATACTGAATGGTCTCGCTCGCAAGCTTCCACATGGCGAAAACGTCTTCTTGAAGCCCGGGGAGAGGGCCCTGAACTGGACTGCTGGACCGGTGGGCGACCTGAAGCCTTGGTAG
Protein Sequence
- >LOC_Os01g70200.1
MRRWVLAIAILAAAVCFFLGAQAQEVRQGHQTERISGSAGDVLEDDPVGRLKVYVYDLPSKYNKKLLKKDPRCLNHMFAAEIFMHRFLLSSAVRTFNPEEADWFYTPVYTTCDLTPSGLPLPFKSPRMMRSAIELIATNWPYWNRSEGADHFFVTPHDFGACFHYQEEKAIGRGILPLLQRATLVQTFGQKNHVCLKDGSITIPPYAPPQKMQAHLIPPDTPRSIFVYFRGLFYDTSNDPEGGYYARGARASVWENFKNNPLFDISTDHPPTYYEDMQRSVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEDVPKLDSILTSIPTDVILRKQRLLANPSMKQAMLFPQPAQAGDAFHQILNGLARKLPHGENVFLKPGERALNWTAGPVGDLKPW*