Gene Details:
- MSU gene ID: LOC_Os01g70200
- RAPdb gene ID: Os01g0926700
- Gene Symbol: OsIRX10
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Inactivation of OsIRX10 leads to decreased xylan content in rice culm cell walls and improved biomass saccharification.
Function-related keywords:
Literature:
- Inactivation of OsIRX10 leads to decreased xylan content in rice culm cell walls and improved biomass saccharification . DOI: 10.1093/mp/sss135 ; PMID: 23180670
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g70200.1
CTTGAAGCCTGCTTATATGTGGAGTTGGAGGAAGAAGGAAGGAAGCCTAGGAAAGCCTCCCCTCACCTTCTCAACTCACCAAACGCTTCTTGGTAGGAGAATTGCCAGAAAAGTTTCCCCCTTCTCCTTGGATCCTTTAATTACCTCCTGGCAATTGCCTGCTAGCTCATAAGGCCGGACAGGGAGAGGGTTGGAGAGGAGAGGAGACACAGGTGCTGGGAAGAGGCCTGTGGGGATCAAGAAGATGAGGAGGTGGGTCTTGGCCATTGCCATTCTTGCTGCTGCTGTATGCTTCTTCCTTGGAGCTCAGGCCCAGGAGGTGCGGCAGGGCCACCAGACAGAGAGGATCTCAGGAAGTGCTGGTGATGTGTTGGAAGATGACCCTGTTGGGAGGCTTAAGGTCTATGTCTATGATCTCCCAAGCAAGTACAACAAGAAGCTGCTGAAGAAGGATCCTAGGTGCCTGAACCACATGTTTGCCGCTGAGATTTTCATGCATCGGTTCCTGTTGTCAAGCGCTGTCCGAACTTTTAATCCCGAGGAAGCTGATTGGTTCTACACACCGGTGTACACTACATGCGACCTGACTCCCTCCGGTCTTCCCTTGCCCTTCAAATCCCCAAGAATGATGCGCAGCGCAATTGAGCTGATTGCAACAAATTGGCCTTACTGGAATAGATCAGAGGGGGCTGATCATTTCTTTGTTACACCACATGACTTTGGCGCTTGCTTCCACTATCAGGAAGAAAAGGCAATTGGACGTGGAATCCTCCCATTGCTTCAGCGTGCCACCCTGGTTCAGACCTTTGGACAAAAGAACCATGTCTGCTTGAAGGACGGCTCGATCACCATTCCGCCATATGCACCCCCACAGAAAATGCAGGCTCATCTTATTCCCCCAGACACCCCTCGGTCTATCTTTGTATATTTCCGTGGTCTGTTCTACGATACCAGCAATGATCCTGAGGGTGGATACTATGCAAGAGGTGCCCGCGCGTCGGTTTGGGAGAATTTCAAGAACAACCCGCTGTTTGACATCTCAACCGATCACCCACCCACGTACTACGAAGATATGCAGAGATCTGTGTTCTGCTTGTGCCCATTGGGCTGGGCTCCATGGAGCCCCAGACTGGTGGAAGCTGTGGTTTTCGGTTGTATTCCGGTGATCATTGCAGATGACATTGTCCTCCCCTTTGCTGATGCTATCCCCTGGGAGGAGATTGGCGTGTTTGTCGCCGAGGAGGATGTTCCGAAGCTGGACAGTATCCTGACATCCATACCAACAGATGTTATCCTGAGGAAGCAGAGGCTTCTCGCGAACCCGTCGATGAAGCAGGCCATGCTGTTCCCCCAGCCTGCTCAGGCAGGAGATGCATTCCATCAGATACTGAATGGTCTCGCTCGCAAGCTTCCACATGGCGAAAACGTCTTCTTGAAGCCCGGGGAGAGGGCCCTGAACTGGACTGCTGGACCGGTGGGCGACCTGAAGCCTTGGTAGCATGCATCTCACTGCCTATAGAAATGTAAAAACTTTTTTGAAAAAGATATATTTACAGACATGATATATACTTGCGCCTTGAGATCACCATGGTTGCATAGTGCTGACCATAAATCAACAAATGTACATTTTTTTGTATCTTTTTCCCTGATAGCTATATACCATATATCTTCATTCCTTTTCTTCCCATTAGCGGATGAAATGCCGGCATTTGTCCGCTTTGTCCATATATGTGGATAACTGGATATCATAATGAAATTATGAGATTTAATTCATGCTGAATGCGTGACATAATTTCAAATGTGG
CDS Sequence
- >LOC_Os01g70200.1
ATGAGGAGGTGGGTCTTGGCCATTGCCATTCTTGCTGCTGCTGTATGCTTCTTCCTTGGAGCTCAGGCCCAGGAGGTGCGGCAGGGCCACCAGACAGAGAGGATCTCAGGAAGTGCTGGTGATGTGTTGGAAGATGACCCTGTTGGGAGGCTTAAGGTCTATGTCTATGATCTCCCAAGCAAGTACAACAAGAAGCTGCTGAAGAAGGATCCTAGGTGCCTGAACCACATGTTTGCCGCTGAGATTTTCATGCATCGGTTCCTGTTGTCAAGCGCTGTCCGAACTTTTAATCCCGAGGAAGCTGATTGGTTCTACACACCGGTGTACACTACATGCGACCTGACTCCCTCCGGTCTTCCCTTGCCCTTCAAATCCCCAAGAATGATGCGCAGCGCAATTGAGCTGATTGCAACAAATTGGCCTTACTGGAATAGATCAGAGGGGGCTGATCATTTCTTTGTTACACCACATGACTTTGGCGCTTGCTTCCACTATCAGGAAGAAAAGGCAATTGGACGTGGAATCCTCCCATTGCTTCAGCGTGCCACCCTGGTTCAGACCTTTGGACAAAAGAACCATGTCTGCTTGAAGGACGGCTCGATCACCATTCCGCCATATGCACCCCCACAGAAAATGCAGGCTCATCTTATTCCCCCAGACACCCCTCGGTCTATCTTTGTATATTTCCGTGGTCTGTTCTACGATACCAGCAATGATCCTGAGGGTGGATACTATGCAAGAGGTGCCCGCGCGTCGGTTTGGGAGAATTTCAAGAACAACCCGCTGTTTGACATCTCAACCGATCACCCACCCACGTACTACGAAGATATGCAGAGATCTGTGTTCTGCTTGTGCCCATTGGGCTGGGCTCCATGGAGCCCCAGACTGGTGGAAGCTGTGGTTTTCGGTTGTATTCCGGTGATCATTGCAGATGACATTGTCCTCCCCTTTGCTGATGCTATCCCCTGGGAGGAGATTGGCGTGTTTGTCGCCGAGGAGGATGTTCCGAAGCTGGACAGTATCCTGACATCCATACCAACAGATGTTATCCTGAGGAAGCAGAGGCTTCTCGCGAACCCGTCGATGAAGCAGGCCATGCTGTTCCCCCAGCCTGCTCAGGCAGGAGATGCATTCCATCAGATACTGAATGGTCTCGCTCGCAAGCTTCCACATGGCGAAAACGTCTTCTTGAAGCCCGGGGAGAGGGCCCTGAACTGGACTGCTGGACCGGTGGGCGACCTGAAGCCTTGGTAG
Protein Sequence
- >LOC_Os01g70200.1
MRRWVLAIAILAAAVCFFLGAQAQEVRQGHQTERISGSAGDVLEDDPVGRLKVYVYDLPSKYNKKLLKKDPRCLNHMFAAEIFMHRFLLSSAVRTFNPEEADWFYTPVYTTCDLTPSGLPLPFKSPRMMRSAIELIATNWPYWNRSEGADHFFVTPHDFGACFHYQEEKAIGRGILPLLQRATLVQTFGQKNHVCLKDGSITIPPYAPPQKMQAHLIPPDTPRSIFVYFRGLFYDTSNDPEGGYYARGARASVWENFKNNPLFDISTDHPPTYYEDMQRSVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEDVPKLDSILTSIPTDVILRKQRLLANPSMKQAMLFPQPAQAGDAFHQILNGLARKLPHGENVFLKPGERALNWTAGPVGDLKPW*