Information report for COG2
Gene Details
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Functional Descriptions
- COG2 encodes a cell wall-localized extensin and affects the compositions of cell wall, including pectin and cellulose, to defense the chilling stress.
- COG2 negatively regulates chilling tolerance through cell wall components altered in rice.
- Chilling-tolerant QTL gene COG2 encoded an extensin and repressed chilling tolerance by affecting the compositions of cell wall.
- COG2 overexpression transgenic plants are sensitive to cold, whereas knockout transgenic lines enhance chilling tolerance.
Functional Keywords
- stress , defense , tolerance , cell-wall , chilling , chilling-stress , chilling-tolerance
Literature and News
Gene Resources
- UniProt: Q5N8V9
- EMBL: AK110796, AP014957
- AlphaFoldDB: Q5N8V9
- EnsemblPlants: Os01t0899700-01
- Gramene: Os01t0899700-01
- KEGG: osa:4325034
- Orthologous matrix: PPFNYKF
- PANTHER: PTHR33470, PTHR33470:SF27
- OrthoDB: Q5N8V9
- eggNOG: KOG4307
Sequences
cDNA Sequence
- >LOC_Os01g67390.1
ATTCAGTCCTCTTCTCCTGTCCTCACACTTGAGAAACCACTGCCAATTGTCAAACAATGAAATTTAGCATGAGAGGACAGCCAAAGGGTATCCCATGGCTGGTATTGGCCATGCTGATTGCAACTTTCGCAATGCTCACGGAGGGAGCTACCAGCTTGTCGCCACCTTCTCTCTCCCTAACACCAACGTATGCTCCTGTTATTAAGGTGATAGGGAAGGTGTACTGCTATAGATGCTTCAATGAGGCACACCCAGAAGAATCCCATGGGAAGGAGCACCTGAAAGGAGCAATGGTCAAGGTTACTTGTCAGGCTAATGACCAGGCACTGGTGGGTTTCGGCTATACCCAAGACAATGGCAAGTACAGCGTGAGCATCACAGGCTTACCACTCAGCAGCACATATGGGGCCGACTCATGTAAGGTTGAGCTCCATTCAGCACCAGGAGGATCTGACTGCAACGTGCCAATCGAGCTAAACTTGTCTGGGCTTAGCGTTTACTCGAAGTCCAATGAGGAAGTGGTGCTCCAAGCCAACCAAGTAATGGCATTCGCGTCACAGAAGACATTTGGGTTTTGTTCGAAACCTCACATTCAACCACCAATTTTTCCATACAATTCACCACCACCGTCCCCTTACCAGTATCCCTCACCTCCTTTCAACTACAAGTCCCCGCCGTTGCCAAATCAGTTTTCACCCCCTCCATTCAACAAGTTTCCACCTCCATCTCACCAGTATCCATCACCTCCGCAGAGTTCCTACCATTCACCACCACCCTATCAGTATACACCTCCAAACAGCTACCAAGCTCCACCAACATCTTACAATCACCCGCCACCCCCATATGGATACAATTCTCCGATCCCACCAACCAACAAGTATTTACCACCCCCATACTACTTCAACTCCCCACCGCCACAATACCAGCATTCGCCACCTGCAAACAGCTATGTATCGCCACCACTAGCTCACCAATATCCCCCACCTCCATACAAGTCACCACCAATACCTCCTTACTACTTCAACTCTCCACCAGCAAACCATTATTCACCACCTCCATACAACTTTGGATCTTCTCCCCCAACCTACCAGTACTCTCCACCATTGCTTCCGAAAACTCCAAAATATTTACCTCCTAAAGTTCCTCTTGAGATGTCTCCACCGGCACATGCAACATCTCCACAGCCTCTGGTCCACTATAGCCCTCCGCCACCACTGCAGCATGCTGGCATATCATCGACAACACCATCTGTGAACTCCTATCAATCCCCGCCACCAGTAAATCAGCTGTCATAAGCATCAGCGATGAGGCTCCTGAAGTGATCAGGCGTCTGCAGAATAAACGGGAGACTTGAAGTCTACCTCGAGAAGAAGCAGTGGGTTAATTCGAGTTCCAGGCATCCATCTCAGTATCTAGGATTGTTACGACAGTAACTAGTATTGTTTCAGCTTATATCTCATTGCCTAGAGCTAATTTCAGCAGGGTAATCATAAGTCCAGTAAGCATTGCCAGTGTCTCTAGTTTTCAACTGAATTCAATGTATGTTGTTGGTTCCTAGCAGCCCATATAAAGCTTTTCTTATGAGCACTTATTACATAAGAAAATCAATCATATGAGAGG
CDS Sequence
- >LOC_Os01g67390.1
ATGAAATTTAGCATGAGAGGACAGCCAAAGGGTATCCCATGGCTGGTATTGGCCATGCTGATTGCAACTTTCGCAATGCTCACGGAGGGAGCTACCAGCTTGTCGCCACCTTCTCTCTCCCTAACACCAACGTATGCTCCTGTTATTAAGGTGATAGGGAAGGTGTACTGCTATAGATGCTTCAATGAGGCACACCCAGAAGAATCCCATGGGAAGGAGCACCTGAAAGGAGCAATGGTCAAGGTTACTTGTCAGGCTAATGACCAGGCACTGGTGGGTTTCGGCTATACCCAAGACAATGGCAAGTACAGCGTGAGCATCACAGGCTTACCACTCAGCAGCACATATGGGGCCGACTCATGTAAGGTTGAGCTCCATTCAGCACCAGGAGGATCTGACTGCAACGTGCCAATCGAGCTAAACTTGTCTGGGCTTAGCGTTTACTCGAAGTCCAATGAGGAAGTGGTGCTCCAAGCCAACCAAGTAATGGCATTCGCGTCACAGAAGACATTTGGGTTTTGTTCGAAACCTCACATTCAACCACCAATTTTTCCATACAATTCACCACCACCGTCCCCTTACCAGTATCCCTCACCTCCTTTCAACTACAAGTCCCCGCCGTTGCCAAATCAGTTTTCACCCCCTCCATTCAACAAGTTTCCACCTCCATCTCACCAGTATCCATCACCTCCGCAGAGTTCCTACCATTCACCACCACCCTATCAGTATACACCTCCAAACAGCTACCAAGCTCCACCAACATCTTACAATCACCCGCCACCCCCATATGGATACAATTCTCCGATCCCACCAACCAACAAGTATTTACCACCCCCATACTACTTCAACTCCCCACCGCCACAATACCAGCATTCGCCACCTGCAAACAGCTATGTATCGCCACCACTAGCTCACCAATATCCCCCACCTCCATACAAGTCACCACCAATACCTCCTTACTACTTCAACTCTCCACCAGCAAACCATTATTCACCACCTCCATACAACTTTGGATCTTCTCCCCCAACCTACCAGTACTCTCCACCATTGCTTCCGAAAACTCCAAAATATTTACCTCCTAAAGTTCCTCTTGAGATGTCTCCACCGGCACATGCAACATCTCCACAGCCTCTGGTCCACTATAGCCCTCCGCCACCACTGCAGCATGCTGGCATATCATCGACAACACCATCTGTGAACTCCTATCAATCCCCGCCACCAGTAAATCAGCTGTCATAA
Protein Sequence
- >LOC_Os01g67390.1
MKFSMRGQPKGIPWLVLAMLIATFAMLTEGATSLSPPSLSLTPTYAPVIKVIGKVYCYRCFNEAHPEESHGKEHLKGAMVKVTCQANDQALVGFGYTQDNGKYSVSITGLPLSSTYGADSCKVELHSAPGGSDCNVPIELNLSGLSVYSKSNEEVVLQANQVMAFASQKTFGFCSKPHIQPPIFPYNSPPPSPYQYPSPPFNYKSPPLPNQFSPPPFNKFPPPSHQYPSPPQSSYHSPPPYQYTPPNSYQAPPTSYNHPPPPYGYNSPIPPTNKYLPPPYYFNSPPPQYQHSPPANSYVSPPLAHQYPPPPYKSPPIPPYYFNSPPANHYSPPPYNFGSSPPTYQYSPPLLPKTPKYLPPKVPLEMSPPAHATSPQPLVHYSPPPPLQHAGISSTTPSVNSYQSPPPVNQLS*