Gene Details:

Functional Descriptions:

  • COG2 encodes a cell wall-localized extensin and affects the compositions of cell wall, including pectin and cellulose, to defense the chilling stress.
  • COG2 negatively regulates chilling tolerance through cell wall components altered in rice.
  • Chilling-tolerant QTL gene COG2 encoded an extensin and repressed chilling tolerance by affecting the compositions of cell wall.
  • COG2 overexpression transgenic plants are sensitive to cold, whereas knockout transgenic lines enhance chilling tolerance.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os01g67390.1
    ATTCAGTCCTCTTCTCCTGTCCTCACACTTGAGAAACCACTGCCAATTGTCAAACAATGAAATTTAGCATGAGAGGACAGCCAAAGGGTATCCCATGGCTGGTATTGGCCATGCTGATTGCAACTTTCGCAATGCTCACGGAGGGAGCTACCAGCTTGTCGCCACCTTCTCTCTCCCTAACACCAACGTATGCTCCTGTTATTAAGGTGATAGGGAAGGTGTACTGCTATAGATGCTTCAATGAGGCACACCCAGAAGAATCCCATGGGAAGGAGCACCTGAAAGGAGCAATGGTCAAGGTTACTTGTCAGGCTAATGACCAGGCACTGGTGGGTTTCGGCTATACCCAAGACAATGGCAAGTACAGCGTGAGCATCACAGGCTTACCACTCAGCAGCACATATGGGGCCGACTCATGTAAGGTTGAGCTCCATTCAGCACCAGGAGGATCTGACTGCAACGTGCCAATCGAGCTAAACTTGTCTGGGCTTAGCGTTTACTCGAAGTCCAATGAGGAAGTGGTGCTCCAAGCCAACCAAGTAATGGCATTCGCGTCACAGAAGACATTTGGGTTTTGTTCGAAACCTCACATTCAACCACCAATTTTTCCATACAATTCACCACCACCGTCCCCTTACCAGTATCCCTCACCTCCTTTCAACTACAAGTCCCCGCCGTTGCCAAATCAGTTTTCACCCCCTCCATTCAACAAGTTTCCACCTCCATCTCACCAGTATCCATCACCTCCGCAGAGTTCCTACCATTCACCACCACCCTATCAGTATACACCTCCAAACAGCTACCAAGCTCCACCAACATCTTACAATCACCCGCCACCCCCATATGGATACAATTCTCCGATCCCACCAACCAACAAGTATTTACCACCCCCATACTACTTCAACTCCCCACCGCCACAATACCAGCATTCGCCACCTGCAAACAGCTATGTATCGCCACCACTAGCTCACCAATATCCCCCACCTCCATACAAGTCACCACCAATACCTCCTTACTACTTCAACTCTCCACCAGCAAACCATTATTCACCACCTCCATACAACTTTGGATCTTCTCCCCCAACCTACCAGTACTCTCCACCATTGCTTCCGAAAACTCCAAAATATTTACCTCCTAAAGTTCCTCTTGAGATGTCTCCACCGGCACATGCAACATCTCCACAGCCTCTGGTCCACTATAGCCCTCCGCCACCACTGCAGCATGCTGGCATATCATCGACAACACCATCTGTGAACTCCTATCAATCCCCGCCACCAGTAAATCAGCTGTCATAAGCATCAGCGATGAGGCTCCTGAAGTGATCAGGCGTCTGCAGAATAAACGGGAGACTTGAAGTCTACCTCGAGAAGAAGCAGTGGGTTAATTCGAGTTCCAGGCATCCATCTCAGTATCTAGGATTGTTACGACAGTAACTAGTATTGTTTCAGCTTATATCTCATTGCCTAGAGCTAATTTCAGCAGGGTAATCATAAGTCCAGTAAGCATTGCCAGTGTCTCTAGTTTTCAACTGAATTCAATGTATGTTGTTGGTTCCTAGCAGCCCATATAAAGCTTTTCTTATGAGCACTTATTACATAAGAAAATCAATCATATGAGAGG
CDS Sequence
  • >LOC_Os01g67390.1
    ATGAAATTTAGCATGAGAGGACAGCCAAAGGGTATCCCATGGCTGGTATTGGCCATGCTGATTGCAACTTTCGCAATGCTCACGGAGGGAGCTACCAGCTTGTCGCCACCTTCTCTCTCCCTAACACCAACGTATGCTCCTGTTATTAAGGTGATAGGGAAGGTGTACTGCTATAGATGCTTCAATGAGGCACACCCAGAAGAATCCCATGGGAAGGAGCACCTGAAAGGAGCAATGGTCAAGGTTACTTGTCAGGCTAATGACCAGGCACTGGTGGGTTTCGGCTATACCCAAGACAATGGCAAGTACAGCGTGAGCATCACAGGCTTACCACTCAGCAGCACATATGGGGCCGACTCATGTAAGGTTGAGCTCCATTCAGCACCAGGAGGATCTGACTGCAACGTGCCAATCGAGCTAAACTTGTCTGGGCTTAGCGTTTACTCGAAGTCCAATGAGGAAGTGGTGCTCCAAGCCAACCAAGTAATGGCATTCGCGTCACAGAAGACATTTGGGTTTTGTTCGAAACCTCACATTCAACCACCAATTTTTCCATACAATTCACCACCACCGTCCCCTTACCAGTATCCCTCACCTCCTTTCAACTACAAGTCCCCGCCGTTGCCAAATCAGTTTTCACCCCCTCCATTCAACAAGTTTCCACCTCCATCTCACCAGTATCCATCACCTCCGCAGAGTTCCTACCATTCACCACCACCCTATCAGTATACACCTCCAAACAGCTACCAAGCTCCACCAACATCTTACAATCACCCGCCACCCCCATATGGATACAATTCTCCGATCCCACCAACCAACAAGTATTTACCACCCCCATACTACTTCAACTCCCCACCGCCACAATACCAGCATTCGCCACCTGCAAACAGCTATGTATCGCCACCACTAGCTCACCAATATCCCCCACCTCCATACAAGTCACCACCAATACCTCCTTACTACTTCAACTCTCCACCAGCAAACCATTATTCACCACCTCCATACAACTTTGGATCTTCTCCCCCAACCTACCAGTACTCTCCACCATTGCTTCCGAAAACTCCAAAATATTTACCTCCTAAAGTTCCTCTTGAGATGTCTCCACCGGCACATGCAACATCTCCACAGCCTCTGGTCCACTATAGCCCTCCGCCACCACTGCAGCATGCTGGCATATCATCGACAACACCATCTGTGAACTCCTATCAATCCCCGCCACCAGTAAATCAGCTGTCATAA
Protein Sequence
  • >LOC_Os01g67390.1
    MKFSMRGQPKGIPWLVLAMLIATFAMLTEGATSLSPPSLSLTPTYAPVIKVIGKVYCYRCFNEAHPEESHGKEHLKGAMVKVTCQANDQALVGFGYTQDNGKYSVSITGLPLSSTYGADSCKVELHSAPGGSDCNVPIELNLSGLSVYSKSNEEVVLQANQVMAFASQKTFGFCSKPHIQPPIFPYNSPPPSPYQYPSPPFNYKSPPLPNQFSPPPFNKFPPPSHQYPSPPQSSYHSPPPYQYTPPNSYQAPPTSYNHPPPPYGYNSPIPPTNKYLPPPYYFNSPPPQYQHSPPANSYVSPPLAHQYPPPPYKSPPIPPYYFNSPPANHYSPPPYNFGSSPPTYQYSPPLLPKTPKYLPPKVPLEMSPPAHATSPQPLVHYSPPPPLQHAGISSTTPSVNSYQSPPPVNQLS*