Gene Details:

Functional Descriptions:

  • Down-regulation of a LBD-like gene, OsIG1, leads to occurrence of unusual double ovules and developmental abnormalities of various floral organs and megagametophyte in rice.
  • Taken together, these results demonstrate that OsIG1 plays an essential role in the regulation of empty-glume identity, floral organ number control and female gametophyte development in rice.
  • Our data suggest, OsMADS1 commits and maintains determinate floret development by regulating floral meristem termination, carpel and ovule differentiation genes (OsMADS58, OsMADS13) while its modulation of genes such as OsMADS15, OsIG1 and OsMADS32 could be relevant in the differentiation and development of palea.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os01g66590.1
    AGATATCAAATTCCTCCCCTTCTCATTTCCTCCCCCCATCTTCGCAACATACAGTACTCACCATCTTTTGGTGGCTCTCTCACTCTCCTCTCTCTCTCCCTAGAACAGAAACCCAAACAAAACGGGGCGAGGTAGTAGCTAGGGGGAAAAAGGGAGAAGTTTTCGGTTTAAAAGGAGAGAACGGCCCGGCCGGAAGTGGTGGAAGGCGAGGAGGAGGAGAACACGGTGAGATCAGGAGAGAGGAGATACCGGCCGGCGGAGGCGGCGGCGCGGCGGCGCAGGGATAGCGGGAAAAAAGATCGCGCCTAAAAAGGGCGAGGAGGATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAGTTGGGAGCGCTTGATTCGGCGGTTGTTGTGTTCGTCTCTGCATGTCAGGTTACTGACTAGGAAATTAAAATTCCCTAAGTTCTGGAAATTGAAGCGGTGAAAAGGATCGTAAATTAAGGCTCATGCTTAGGAGGATTGCTCGGTCTATTTTACATGAAGATCATGCGTGTTCACTCTGTTAATTTGCCTTGTCAATGCTTATCTTTTTCTTTCAATCGATCATCCGCAATGTCGAACATTTTATTTGTGCCTTGATCTGTTGCTGGGATTGTTGCTGTACTGTGTGCATGCTTGTCCCTGATTTTAGCACTTGGACGGCTACCTTAATTAATACTACTATATTGATACTGCTCCTATATAGAGGCTAGCTAGAGTCGATGCTGCAGTTGACCTTCAGATTAATGTTGAATCTGTTTGACAAA
  • >LOC_Os01g66590.3
    AGATATCAAATTCCTCCCCTTCTCATTTCCTCCCCCCATCTTCGCAACATACAGTACTCACCATCTTTTGGTGGCTCTCTCACTCTCCTCTCTCTCTCCCTAGAACAGAAACCCAAACAAAACGGGGCGAGGTAGTAGCTAGGGGGAAAAAGGGAGAAGTTTTCGGTTTAAAAGGAGAGAACGGCCCGGCCGGAAGTGGTGGAAGGCGAGGAGGAGGAGAACACGGTGAGATCAGGAGAGAGGAGATACCGGCCGGCGGAGGCGGCGGCGCGGCGGCGCAGGGATAGCGGGAAAAAAGATCGCGCCTAAAAAGGGCGAGGAGGATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAGTTGGGAGCGCTTGATTCGGCGGTTGTTGTGTTCGTCTCTGCATGTCAGGTTACTGACTAGGAAATTAAAATTCCCTAAGTTCTGGAAATTGAAGCGGTGAAAAGGATCGTAAATTAAGGCTCATGCTTAGGAGGATTGCTCGGTCTATTTTACATGAAGATCATGCGTGTTCACTCTGTTAATTTGCCTTGTCAATGCTTATCTTTTTCTTTCAATCGATCATCCGCAATGTCGAACATTTTATTTGTGCCTTGATCTGTTGCTGGGATTGTTGCTGTACTGTGTGCATGCTTGTCCCTGATTTTAGCACTTGGACGGCTACCTTAATTAATACTACTATATTGATACTGCTCCTATATAGAGGCTAGCTAGAGTCGATGCTGCAGTTGACCTTCAGATTAATGTTGAATCTGTTTGACAAA
  • >LOC_Os01g66590.2
    AGATATCAAATTCCTCCCCTTCTCATTTCCTCCCCCCATCTTCGCAACATACAGTACTCACCATCTTTTGGTGGCTCTCTCACTCTCCTCTCTCTCTCCCTAGAACAGAAACCCAAACAAAACGGGGCGAGGTAGTAGCTAGGGGGAAAAAGGGAGAAGTTTTCGGTTTAAAAGGAGAGAACGGCCCGGCCGGAAGTGGTGGAAGGCGAGGAGGAGGAGAACACGGTGAGATCAGGAGAGAGGAGATACCGGCCGGCGGAGGCGGCGGCGCGGCGGCGCAGGGATAGCGGGAAAAAAGATCGCGCCTAAAAAGGGCGAGGAGGATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAGTTGGGAGCGCTTGATTCGGCGGTTGTTGTGTTCGTCTCTGCATGTCAGGTTACTGACTAGGAAATTAAAATTCCCTAAGTTCTGGAAATTGAAGCGGTGAAAAGGATCGTAAATTAAGGCTCATGCTTAGGAGGATTGCTCGGTCTATTTTACATGAAGATCATGCGTGTTCACTCTGTTAATTTGCCTTGTCAATGCTTATCTTTTTCTTTCAATCGATCATCCGCAATGTCGAACATTTTATTTGTGCCTTGATCTGTTGCTGGGATTGTTGCTGTACTGTGTGCATGCTTGTCCCTGATTTTAGCACTTGGACGGCTACCTTAATTAATACTACTATATTGATACTGCTCCTATATAGAGGCTAGCTAGAGTCGATGCTGCAGTTGACCTTCAGATTAATGTTGAATCTGTTTGACAAA
CDS Sequence
  • >LOC_Os01g66590.1
    ATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAG
  • >LOC_Os01g66590.3
    ATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAG
  • >LOC_Os01g66590.2
    ATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAG
Protein Sequence
  • >LOC_Os01g66590.1
    MASSSASSVPAPSGSVITIASASASAAANTAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASASTGTNNGPHSMAEFIGNAVPNGAQSFINVGHSAALASVGGAAACFGQEQQFSAVHMLSRSYEGEPIARLGGNGGYEFGYSTSMAGGGHMSGLGALGGAPFLKSGIAGSDERQGAGQ*
  • >LOC_Os01g66590.3
    MASSSASSVPAPSGSVITIASASASAAANTAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASASTGTNNGPHSMAEFIGNAVPNGAQSFINVGHSAALASVGGAAACFGQEQQFSAVHMLSRSYEGEPIARLGGNGGYEFGYSTSMAGGGHMSGLGALGGAPFLKSGIAGSDERQGAGQ*
  • >LOC_Os01g66590.2
    MASSSASSVPAPSGSVITIASASASAAANTAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASASTGTNNGPHSMAEFIGNAVPNGAQSFINVGHSAALASVGGAAACFGQEQQFSAVHMLSRSYEGEPIARLGGNGGYEFGYSTSMAGGGHMSGLGALGGAPFLKSGIAGSDERQGAGQ*