Gene Details:
- MSU gene ID: LOC_Os01g66590
- RAPdb gene ID: Os01g0889400
- Gene Symbol: OsIG1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Down-regulation of a LBD-like gene, OsIG1, leads to occurrence of unusual double ovules and developmental abnormalities of various floral organs and megagametophyte in rice.
- Taken together, these results demonstrate that OsIG1 plays an essential role in the regulation of empty-glume identity, floral organ number control and female gametophyte development in rice.
- Our data suggest, OsMADS1 commits and maintains determinate floret development by regulating floral meristem termination, carpel and ovule differentiation genes (OsMADS58, OsMADS13) while its modulation of genes such as OsMADS15, OsIG1 and OsMADS32 could be relevant in the differentiation and development of palea.
Function-related keywords:
- floral-organ , double-ovules , ovule , developmental-abnormality , development , floral , megagametophyte , empty-glume-identity , floral-organ-number-control , female-gametophyte-development , meristem , floral-meristem , palea
Literature:
- Down-regulation of a LBD-like gene, OsIG1, leads to occurrence of unusual double ovules and developmental abnormalities of various floral organs and megagametophyte in rice . DOI: 10.1093/jxb/eru396 ; PMID: 25324400
- Characterization of a new rice OsMADS1 null mutant generated by homologous recombination-mediated gene targeting . DOI: 10.1007/s00425-020-03547-3 ; PMID: 33474591
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g66590.1
AGATATCAAATTCCTCCCCTTCTCATTTCCTCCCCCCATCTTCGCAACATACAGTACTCACCATCTTTTGGTGGCTCTCTCACTCTCCTCTCTCTCTCCCTAGAACAGAAACCCAAACAAAACGGGGCGAGGTAGTAGCTAGGGGGAAAAAGGGAGAAGTTTTCGGTTTAAAAGGAGAGAACGGCCCGGCCGGAAGTGGTGGAAGGCGAGGAGGAGGAGAACACGGTGAGATCAGGAGAGAGGAGATACCGGCCGGCGGAGGCGGCGGCGCGGCGGCGCAGGGATAGCGGGAAAAAAGATCGCGCCTAAAAAGGGCGAGGAGGATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAGTTGGGAGCGCTTGATTCGGCGGTTGTTGTGTTCGTCTCTGCATGTCAGGTTACTGACTAGGAAATTAAAATTCCCTAAGTTCTGGAAATTGAAGCGGTGAAAAGGATCGTAAATTAAGGCTCATGCTTAGGAGGATTGCTCGGTCTATTTTACATGAAGATCATGCGTGTTCACTCTGTTAATTTGCCTTGTCAATGCTTATCTTTTTCTTTCAATCGATCATCCGCAATGTCGAACATTTTATTTGTGCCTTGATCTGTTGCTGGGATTGTTGCTGTACTGTGTGCATGCTTGTCCCTGATTTTAGCACTTGGACGGCTACCTTAATTAATACTACTATATTGATACTGCTCCTATATAGAGGCTAGCTAGAGTCGATGCTGCAGTTGACCTTCAGATTAATGTTGAATCTGTTTGACAAA - >LOC_Os01g66590.3
AGATATCAAATTCCTCCCCTTCTCATTTCCTCCCCCCATCTTCGCAACATACAGTACTCACCATCTTTTGGTGGCTCTCTCACTCTCCTCTCTCTCTCCCTAGAACAGAAACCCAAACAAAACGGGGCGAGGTAGTAGCTAGGGGGAAAAAGGGAGAAGTTTTCGGTTTAAAAGGAGAGAACGGCCCGGCCGGAAGTGGTGGAAGGCGAGGAGGAGGAGAACACGGTGAGATCAGGAGAGAGGAGATACCGGCCGGCGGAGGCGGCGGCGCGGCGGCGCAGGGATAGCGGGAAAAAAGATCGCGCCTAAAAAGGGCGAGGAGGATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAGTTGGGAGCGCTTGATTCGGCGGTTGTTGTGTTCGTCTCTGCATGTCAGGTTACTGACTAGGAAATTAAAATTCCCTAAGTTCTGGAAATTGAAGCGGTGAAAAGGATCGTAAATTAAGGCTCATGCTTAGGAGGATTGCTCGGTCTATTTTACATGAAGATCATGCGTGTTCACTCTGTTAATTTGCCTTGTCAATGCTTATCTTTTTCTTTCAATCGATCATCCGCAATGTCGAACATTTTATTTGTGCCTTGATCTGTTGCTGGGATTGTTGCTGTACTGTGTGCATGCTTGTCCCTGATTTTAGCACTTGGACGGCTACCTTAATTAATACTACTATATTGATACTGCTCCTATATAGAGGCTAGCTAGAGTCGATGCTGCAGTTGACCTTCAGATTAATGTTGAATCTGTTTGACAAA - >LOC_Os01g66590.2
AGATATCAAATTCCTCCCCTTCTCATTTCCTCCCCCCATCTTCGCAACATACAGTACTCACCATCTTTTGGTGGCTCTCTCACTCTCCTCTCTCTCTCCCTAGAACAGAAACCCAAACAAAACGGGGCGAGGTAGTAGCTAGGGGGAAAAAGGGAGAAGTTTTCGGTTTAAAAGGAGAGAACGGCCCGGCCGGAAGTGGTGGAAGGCGAGGAGGAGGAGAACACGGTGAGATCAGGAGAGAGGAGATACCGGCCGGCGGAGGCGGCGGCGCGGCGGCGCAGGGATAGCGGGAAAAAAGATCGCGCCTAAAAAGGGCGAGGAGGATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAGTTGGGAGCGCTTGATTCGGCGGTTGTTGTGTTCGTCTCTGCATGTCAGGTTACTGACTAGGAAATTAAAATTCCCTAAGTTCTGGAAATTGAAGCGGTGAAAAGGATCGTAAATTAAGGCTCATGCTTAGGAGGATTGCTCGGTCTATTTTACATGAAGATCATGCGTGTTCACTCTGTTAATTTGCCTTGTCAATGCTTATCTTTTTCTTTCAATCGATCATCCGCAATGTCGAACATTTTATTTGTGCCTTGATCTGTTGCTGGGATTGTTGCTGTACTGTGTGCATGCTTGTCCCTGATTTTAGCACTTGGACGGCTACCTTAATTAATACTACTATATTGATACTGCTCCTATATAGAGGCTAGCTAGAGTCGATGCTGCAGTTGACCTTCAGATTAATGTTGAATCTGTTTGACAAA
CDS Sequence
- >LOC_Os01g66590.1
ATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAG - >LOC_Os01g66590.3
ATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAG - >LOC_Os01g66590.2
ATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAG
Protein Sequence
- >LOC_Os01g66590.1
MASSSASSVPAPSGSVITIASASASAAANTAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASASTGTNNGPHSMAEFIGNAVPNGAQSFINVGHSAALASVGGAAACFGQEQQFSAVHMLSRSYEGEPIARLGGNGGYEFGYSTSMAGGGHMSGLGALGGAPFLKSGIAGSDERQGAGQ* - >LOC_Os01g66590.3
MASSSASSVPAPSGSVITIASASASAAANTAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASASTGTNNGPHSMAEFIGNAVPNGAQSFINVGHSAALASVGGAAACFGQEQQFSAVHMLSRSYEGEPIARLGGNGGYEFGYSTSMAGGGHMSGLGALGGAPFLKSGIAGSDERQGAGQ* - >LOC_Os01g66590.2
MASSSASSVPAPSGSVITIASASASAAANTAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASASTGTNNGPHSMAEFIGNAVPNGAQSFINVGHSAALASVGGAAACFGQEQQFSAVHMLSRSYEGEPIARLGGNGGYEFGYSTSMAGGGHMSGLGALGGAPFLKSGIAGSDERQGAGQ*