Gene Details:
- MSU gene ID: LOC_Os01g65500
- RAPdb gene ID: Os01g0876100
- Gene Symbol: OsCLC1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- SAPK4-regulated genes with functions in ion homeostasis and oxidative stress response were identified: the vacuolar H+-ATPase, the Na+/H+ antiporter NHX1, the Cl- channel OsCLC1 and a catalase.
Function-related keywords:
Literature:
- Salt-dependent regulation of chloride channel transcripts in rice . DOI: 10.1016/j.plantsci.2005.11.014
- The SNF1-type serine-threonine protein kinase SAPK4 regulates stress-responsive gene expression in rice . DOI: 10.1186/1471-2229-8-49 ; PMID: 18442365
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g65500.1
TCTTCTTCCTCTTCTCCGAGCGCTCGCATCGCACCGCAATTCAATGCCCGCGCTTCGGTGTGAGATCGACCTAGCCGGCCTCCCTGACGACGATTGAAGATCGAACCTACCGTTGCAAGATCTTGTATAGTTTGCAAAATCCAGCTGTCTAACGAAGAACATGTAAAAGATCTTGTATCTGCATGGATTTCGATGCGACTACCTAAAGTGCCAGGTAAATAACTGAAATAAGCTATCCATAAGCGGGGAATCCAGTACGACGATGGCTGTAGGAACAGAGAGTGGCTCGGGCGGCGTAGCCGAGAGCGCCCCCTCGACGCCAATGTCGGCAATGACAACAACGCCCATATCGGCGAGGTCGGTGAGGTGGGAGAGCGACATGCCGGACATCGAGGAGGGAGGCGGCGGGCTGGAGCGGCCGCTGCTGCGCCGCCGCGGCACCAACACCACGTCGCAGATGGCCATCGTCGGCGCCAACGTCTGCCCCATCGAGAGCCTCGATTACGAACTTGTGGAGAATGAAGTGTACAAGCAGGACTGGAGATCAAGGGGGAAATTGCAAATCTTCCACTATCAGATCCTTAAATGGGTCCTAGCACTTCTTGTTGGATTAATAGTTGGCCTAATAGGATTCTTCAACAACATTGCCGTCGAAAACATAGCCGGGTTCAAGCTGCTCCTGACGACCAATCTAATGCTCCAGAACAGGTACAAGGCGGCCTTTCTATGGTTTATCAGCTGCAATGCAATGTTGGCAGCAGCCGCTGCAGCATTGTGCGCTTACTTTGGCCCAGCGGCTGCCGGATCTGGCATACCTGAGGTGAAGGCCTATCTGAATGGTGTCGACGCGCCGTCCATCTTAGCGCCCAGTACCCTCTTCGTCAAGATTGTTGGGTCTATATTTGGGGTGTCTGCTGGGTTTGTGCTGGGCAAGGAAGGTCCTATGGTGCACACTGGGGCTTGTGTTGCCTCCTTTCTAGGACAAGGCGGGTCGCGCAAGTATGGCTTCACTTGGAATTGGCTCAGGTACTTCAAGAATGATTTGGACCGCAGGGATCTGATCACCTGTGGAGCTGCAGCAGGAGTTACAGCAGCCTTCCGCGCCCCTGTCGGCGGTGTCCTCTTCGCACTTGAAGAAGCAACATCCTGGTGGCGGAGCGCGCTTCTCTGGAGGACATTCTCCACGACAGCAGTGGCGGCAATGGTGCTAAGGTCCCTAATAGAGTACTGCCGCAGCGGCAACTGTGGCCTGTTCGGGAAAGGAGGGCTGATCATGTTCGACGTAAGTTCACAGGTGACATCATACACCACCATGGATCTCGCCGCGGTTGTGCTGCTCGCCATCGTCGGCGGGCTACTTGGAGCACTCTTCAACTTCCTCCTCAATCGGATCCTTCGTGTGTATAGCTACATCAACGAGAAAGGCGCGCCGTACAAGATCATTCTTACGGTGGTCATCTCGCTGGTCACCTCGTGCTGCTCCTTCGGCTTGCCGTGGCTGACGGCGTGCACGCCATGCCCGCCGGAGCTGGCCGCCAGCGGCCACTGCCCGACCATCGGCCGCTCCGGCAACTTCAAGAACTTCCGGTGTCCGCCGGGGCAGTACAACGCCATGGCGTCGCTGTTCCTCAACACCAACGACGACGCCATCCGCAACCTCTTCAGCGGCGGCACGGAGAGCGAGTTCGGCGTGCCCATGCTGCTCGCGTTCTTCACCGCCGTCTACTCGCTCGGCCTGGTCACCTACGGCGTGGCCGTGCCGTCGGGCCTCTTCATCCCCGTGATCCTCTCCGGCGCGTCGTTCGGCCGGCTGCTCGGGAAGCTGCTCGGCGTGCTCACCGGCCTCGACACGGGGCTCTTCGCGCTGCTCGGCGCGGCGTCCTTCCTCGGCGGGACGATGCGGATGACGGTGTCGGTGTGCGTCATCCTCCTGGAGCTCACCAACGACCTCCTGCTGCTGCCGCTCATCATGCTGGTGCTGCTCGTCTCCAAGACGGTGGCCGACTGCTTCAACAAGGGCGTGTACGAGCAGATGGTGCGCATGAAGGGGCTCCCTTACCTGGAGGCGCACGCCGAGCCGTGCATGCGCAGCCTGGTCGCCGGCGACGTCGTGTCCGCGCCGCTCATCGCCTTCTCCAGCGTCGAGAGCGTCGGCACCGTCGTGGACACGCTGCGCCGCACGGGGCACAACGGGTTCCCGGTGATCGAGGACGCGCCGTTCGCGCCGGAGCCGGAGCTGTGCGGCCTCGTGCTGCGCTCCCACCTCCTCGTGCTCCTCCGCGCCAAGACCTTCACCGCCGACCGCGTCAAGACCGGCGCCGCCGAGGTGTTCCGCAAGCTCGCGCCGTTCGACTTCGCCAAGCCCGGGTCGGGCAAGGGCCTCACCGTCGACGACCTGGACCTCACCGAGGAGGAGATGGCCATGTACGTCGACCTCCACCCGATCGCCAACCGCTCGCCGTACACCGTAGTGGAGAACATGTCGCTGGCCAAGGCCGCCGTGCTCTTCCGCCAGCTCGGCCTCCGCCACATGTGCGTCGTGCCGAGGACGCCGGGGAGGCCGCCGGTGGTCGGGATCCTGACGCGACACGACTTCATGCCGGGTTACATCCGCGGGTTGTTTCCGAACGTCCTCCGTGAGTAGCGGCCATGGCGAGCGCGCGAACGAATTCTTTTGCACATATCTTTTTTTTCTGCTTTTGGACCTTATTACCAACTGGAGTAGATTAGCTTAGATTTGATGTTTAATTAGCACCCAAGTGAACGAGCGGTGGCTGCAAAATTCTATGAACTCGCAAAGCCTGAGAGTGAGAGTTCAGCTATATGAGGTGAGAATTAAATGTCATAGGTTTAATGGAGCTTTGTAATTAACTGATGATCTTTTCGAAAAAACAACTCGTCGATGATGCCGATAATGAATTTGATTTCAGTCAATTTGTTGGTGTAATTATGTGAA
CDS Sequence
- >LOC_Os01g65500.1
ATGGCTGTAGGAACAGAGAGTGGCTCGGGCGGCGTAGCCGAGAGCGCCCCCTCGACGCCAATGTCGGCAATGACAACAACGCCCATATCGGCGAGGTCGGTGAGGTGGGAGAGCGACATGCCGGACATCGAGGAGGGAGGCGGCGGGCTGGAGCGGCCGCTGCTGCGCCGCCGCGGCACCAACACCACGTCGCAGATGGCCATCGTCGGCGCCAACGTCTGCCCCATCGAGAGCCTCGATTACGAACTTGTGGAGAATGAAGTGTACAAGCAGGACTGGAGATCAAGGGGGAAATTGCAAATCTTCCACTATCAGATCCTTAAATGGGTCCTAGCACTTCTTGTTGGATTAATAGTTGGCCTAATAGGATTCTTCAACAACATTGCCGTCGAAAACATAGCCGGGTTCAAGCTGCTCCTGACGACCAATCTAATGCTCCAGAACAGGTACAAGGCGGCCTTTCTATGGTTTATCAGCTGCAATGCAATGTTGGCAGCAGCCGCTGCAGCATTGTGCGCTTACTTTGGCCCAGCGGCTGCCGGATCTGGCATACCTGAGGTGAAGGCCTATCTGAATGGTGTCGACGCGCCGTCCATCTTAGCGCCCAGTACCCTCTTCGTCAAGATTGTTGGGTCTATATTTGGGGTGTCTGCTGGGTTTGTGCTGGGCAAGGAAGGTCCTATGGTGCACACTGGGGCTTGTGTTGCCTCCTTTCTAGGACAAGGCGGGTCGCGCAAGTATGGCTTCACTTGGAATTGGCTCAGGTACTTCAAGAATGATTTGGACCGCAGGGATCTGATCACCTGTGGAGCTGCAGCAGGAGTTACAGCAGCCTTCCGCGCCCCTGTCGGCGGTGTCCTCTTCGCACTTGAAGAAGCAACATCCTGGTGGCGGAGCGCGCTTCTCTGGAGGACATTCTCCACGACAGCAGTGGCGGCAATGGTGCTAAGGTCCCTAATAGAGTACTGCCGCAGCGGCAACTGTGGCCTGTTCGGGAAAGGAGGGCTGATCATGTTCGACGTAAGTTCACAGGTGACATCATACACCACCATGGATCTCGCCGCGGTTGTGCTGCTCGCCATCGTCGGCGGGCTACTTGGAGCACTCTTCAACTTCCTCCTCAATCGGATCCTTCGTGTGTATAGCTACATCAACGAGAAAGGCGCGCCGTACAAGATCATTCTTACGGTGGTCATCTCGCTGGTCACCTCGTGCTGCTCCTTCGGCTTGCCGTGGCTGACGGCGTGCACGCCATGCCCGCCGGAGCTGGCCGCCAGCGGCCACTGCCCGACCATCGGCCGCTCCGGCAACTTCAAGAACTTCCGGTGTCCGCCGGGGCAGTACAACGCCATGGCGTCGCTGTTCCTCAACACCAACGACGACGCCATCCGCAACCTCTTCAGCGGCGGCACGGAGAGCGAGTTCGGCGTGCCCATGCTGCTCGCGTTCTTCACCGCCGTCTACTCGCTCGGCCTGGTCACCTACGGCGTGGCCGTGCCGTCGGGCCTCTTCATCCCCGTGATCCTCTCCGGCGCGTCGTTCGGCCGGCTGCTCGGGAAGCTGCTCGGCGTGCTCACCGGCCTCGACACGGGGCTCTTCGCGCTGCTCGGCGCGGCGTCCTTCCTCGGCGGGACGATGCGGATGACGGTGTCGGTGTGCGTCATCCTCCTGGAGCTCACCAACGACCTCCTGCTGCTGCCGCTCATCATGCTGGTGCTGCTCGTCTCCAAGACGGTGGCCGACTGCTTCAACAAGGGCGTGTACGAGCAGATGGTGCGCATGAAGGGGCTCCCTTACCTGGAGGCGCACGCCGAGCCGTGCATGCGCAGCCTGGTCGCCGGCGACGTCGTGTCCGCGCCGCTCATCGCCTTCTCCAGCGTCGAGAGCGTCGGCACCGTCGTGGACACGCTGCGCCGCACGGGGCACAACGGGTTCCCGGTGATCGAGGACGCGCCGTTCGCGCCGGAGCCGGAGCTGTGCGGCCTCGTGCTGCGCTCCCACCTCCTCGTGCTCCTCCGCGCCAAGACCTTCACCGCCGACCGCGTCAAGACCGGCGCCGCCGAGGTGTTCCGCAAGCTCGCGCCGTTCGACTTCGCCAAGCCCGGGTCGGGCAAGGGCCTCACCGTCGACGACCTGGACCTCACCGAGGAGGAGATGGCCATGTACGTCGACCTCCACCCGATCGCCAACCGCTCGCCGTACACCGTAGTGGAGAACATGTCGCTGGCCAAGGCCGCCGTGCTCTTCCGCCAGCTCGGCCTCCGCCACATGTGCGTCGTGCCGAGGACGCCGGGGAGGCCGCCGGTGGTCGGGATCCTGACGCGACACGACTTCATGCCGGGTTACATCCGCGGGTTGTTTCCGAACGTCCTCCGTGAGTAG
Protein Sequence
- >LOC_Os01g65500.1
MAVGTESGSGGVAESAPSTPMSAMTTTPISARSVRWESDMPDIEEGGGGLERPLLRRRGTNTTSQMAIVGANVCPIESLDYELVENEVYKQDWRSRGKLQIFHYQILKWVLALLVGLIVGLIGFFNNIAVENIAGFKLLLTTNLMLQNRYKAAFLWFISCNAMLAAAAAALCAYFGPAAAGSGIPEVKAYLNGVDAPSILAPSTLFVKIVGSIFGVSAGFVLGKEGPMVHTGACVASFLGQGGSRKYGFTWNWLRYFKNDLDRRDLITCGAAAGVTAAFRAPVGGVLFALEEATSWWRSALLWRTFSTTAVAAMVLRSLIEYCRSGNCGLFGKGGLIMFDVSSQVTSYTTMDLAAVVLLAIVGGLLGALFNFLLNRILRVYSYINEKGAPYKIILTVVISLVTSCCSFGLPWLTACTPCPPELAASGHCPTIGRSGNFKNFRCPPGQYNAMASLFLNTNDDAIRNLFSGGTESEFGVPMLLAFFTAVYSLGLVTYGVAVPSGLFIPVILSGASFGRLLGKLLGVLTGLDTGLFALLGAASFLGGTMRMTVSVCVILLELTNDLLLLPLIMLVLLVSKTVADCFNKGVYEQMVRMKGLPYLEAHAEPCMRSLVAGDVVSAPLIAFSSVESVGTVVDTLRRTGHNGFPVIEDAPFAPEPELCGLVLRSHLLVLLRAKTFTADRVKTGAAEVFRKLAPFDFAKPGSGKGLTVDDLDLTEEEMAMYVDLHPIANRSPYTVVENMSLAKAAVLFRQLGLRHMCVVPRTPGRPPVVGILTRHDFMPGYIRGLFPNVLRE*