Information report for RNAhA
Gene Details
|
|
Functional Descriptions
Literature and News
Gene Resources
- UniProt: Q5ZAQ9
- EMBL: AP003377, AP014957
- EnsemblPlants: Os01t0767700-01
- Gramene: Os01t0767700-01
- Orthologous matrix: HMECGSA
- InterPro: IPR001374, IPR001650, IPR002110
- PANTHER: PTHR18934, PTHR18934:SF213
- SUPFAM: SSF48403, SSF52540, SSF82708
- PROSITE: PS50088, PS51061, PS51192
- Gene3D: 1.20.120.1080, 1.25.40.20, 3.30.1370.50
- SWISS-MODEL: Q5ZAQ9
- Conserved Domain Database: cd06007, cd17917, cd18791
- eggNOG: KOG0920
Sequences
cDNA Sequence
- >LOC_Os01g56190.1
GCAGCCACCGCCATCTGGGCCTAGGTTTTCCGGGAGAGCGCAGCGGCGGCGCGGAAGCAACGAAGCGACCGCTTGCGGGAAGGGCCGGAGCCGAGCCGGCCGCGCCGCCTCGCCCGACGTCGTAGCAACCAAGCCACCCCCGCTCCACGACGAGGAGGAGGAGGAGGGAGGAAGGATGGTGAGGAGAGGGCGGAAGGGCAAGGACGCGGCGGCTGGCGCCGGCGGCACCGGTGGCAGAGGCGGCGGTGCCGGCAGAGGAGGCGGCAGAGGAGGAAGCGGCGGCGGGGGCGGGGGAGGGGGTGTTCGGGAGGCGACGCTGGTGCGCGTCTCGAAAGTGCTCGAGGACTTCCAAGCCTCCGACGCCCAGGTGTACAAATTTGAACCTGGCATATCGAAACAAGAGCGAGCGGCGATACATGAGATGTGTAGAAAAATGGGCATGATATCCAAAAGTTCTGGGAATGGGGAACGACGATGCCTATCTGTTTACAAAAGAAAACAGAACCAGGGCCTTGAAACAGAAGAAGGACCTAGCCATCTTGGATTTTCTGTGGAAGCGAGAAATGTTTTGCAAGATCTATTTATGCATTATCCCCCAGATGATGCGGAGCTAAATGGGCATACTGTCAGGAATTCTAGTGATAAGGCTGTAAAGATTCAGTGGAAGCCAGATGGTGCATTTTGTAGGCCAGCATTGCGCAAACCGGATATATTGAAGAAGGTGGAGATGCTTGCATCGAAAGTAAATAAATCCGAACAGTTGAGGAAGATTGTCCAAGATAGATCTAAACTTCCAATTTCCTCATACAAGGATGCAATTTCTTCGACTTTAGAGAATCACCAGGTGGTTCTTATTTCTGGAGAAACAGGATGTGGTAAAACAACACAGGTTCCTCAATATATCTTGGATCATATGTGGGGTAAGGGTGAATCATGTAAGATTGTATGCACTCAACCAAGGCGAATATCAGCTATCTCAGTTGCTGAGAGAATCTCTGCGGAAAGAGGAGAGTCTGTGGGTGACACAGTTGGGTATAAGATACGCTTGGAGTCAAAAGGAGGGAAGAACTCATCAATCATGTTCTGCACAAATGGTGTTCTTTTGAGGCTATTGATAGGCAGGGTAACTAATATTTCAAAAGAACAAAATCAGAAACGCTCATTTGATGATGCAGTTACTGGGATAACACATATTATTGTGGATGAAATCCATGAAAGGGACAGGTTTTCAGATTTCATGTTGGCTATTCTAAGAGATTTGCTGCCGTTGTATCCTCATCTGCGTTTGGTACTCATGAGTGCAACGATTGATGCTGAGCGGTTCTCAAATTATTTCAGTGGATGCCCATTTATTCAAGTCCCAGGGTTTACCCATCCTGTCAAAACTTTCTATTTGGAGGATGTGCTTTCTATTTTGCAATCTGTAGGCGATAATCATCTTGATCCTACAACAGATGATCTGAAACAGAGCAGTTTGTTAACAGATGATTACAAAAGCTCAATGGATGAAGCCATTAACCTAGCTTTGGATAATGATGAATTTGATCCTCTTCTTGAGCTTATTTCTGCTGAGCAGAACCAAGAAATTTTCAATTACCAGCACTCAGAAACTGGTGTGACACCTTTGATGGTTCTTGCTGGAAAAGGTCAGGTTGGGGACATTTGCATGCTTCTATCATTTGGGGTGGATTGTTCTACACGGGATCATGATGGAAAATCTGCATTAGGTTGGGCAGAACAAGGGAATCAGCAAGAGGTTTGCGAAGTTATTAAGAAACATATGGAATGTGGTTCAGCAAAGTTAACTGAAGAGAATGAGCTGCTCAATAAATACTTGGCAACCATCAATCCTGAGCACATCGATACTGTGCTAATAGAACGGTTGCTCAGAAAAATTTGTGTTGATTCCAATGAAGGAGCTATCTTGGTGTTTCTTCCTGGGTGGGAAGATATAAATCAAACACGGGAAAGGTTGCTTGCTTCTCCCTTCTTTCAGGATTCGTCAAAGTTTCTTGTGTTGTCACTCCATTCCATGATCCCATCTTCGGAGCAGAAAAAAGTTTTCAAGCGTCCACCAGCAGGATCTCGTAAAATAATTCTCTCAACCAACATAGCAGAGACTGCTGTGACAATTGATGACGTCGTATTTGTCATAGATAGTGGGAGAATGAAAGAGAAAAGTTATGATCCATATAATAATGTCTCAACACTTCATTCTTCCTGGGTTTCAAAAGCTAATGCCAGACAACGTCAAGGGCGTGCGGGTCGTTGTCAGCCAGGAACGTGCTACCATCTCTACTCTAGATTTCGAGCAGCCTCATTACTGGAATACCAAATCCCTGAAATAAAGAGGATGCCTATTGAGGAACTATGTTTACAGGTCAAACTGCTTGATCCGAACTGCAGAATTGCAGACTTTTTAAGGAAAACTTTGGACCCTCCAATTCCAGAAACTGTAAGAAATGCTATCACCGTACTTCAGGATCTTGGTGCTTTGACTCAAGATGAACAACTGACAGAGTTAGGGGAAAAGTTGGGCTCCCTTCCGGTCCATCCATCTACAAGCAAGATGCTCTTGTTTGGTATATTAATGAATTGCCTAGATCCGGCGTTGACATTGGCATGTGCAGCAGATTATAGAGATCCTTTCCTCCTTCCAATGGCTCCAGATGAGAGGAAAAGGGCTGCTGCAGCCAAAGTTGAGCTTGCTTCATTGTATGGTGGATACAGTGATCAGCTTGCAGTTGTAGCAGCAATGGACTGTTGGAGACGTGCCAAAGATAGGGGCCAAGAAGCTCAATTTTGTTCTAAGTATTTTGTGTCTTCTAACACCATGAATATGCTTTCAAACATGAGGAAACAGCTTCAGAATGAACTAGCCCAAAGAGGATTTGTTCCTGTAGATGCATCTGCATGCAGCTTAAATGCTAGAGATCCAGGTATCATTCGTGCTGTCCTTATGGCCGGTGCTTATCCAATGGTAGGGAGATTGCTTCCCCCTCGCAAAAATACTAGAAGAGCAGTCATTGAAACAGCAAGTGGTGCCAAAGTTCGACTGCATCCACATTCTTGCAACTTTAACTTGTCTTTCCGTAAGACTTCTGGGAACCCATTAGTGATATATGATGAGATCACTCGAGGCGATGGTGGAATGTACATAAAAAACTCTTCGGTTGTTGGGTCCTATCCTTTAATTATTCTTGCTACGGAAATGGTTGTTGCTCCACCTGAGGACGATGATAGTGATGAAGAGGATGGGGATTCTAGTGAGGATGAAACTGAGAAAGTCACTTTGGGACAACATAAAGAGATAATGTCTTCTCCTGATAACTCTGTTTCAGTTGTTATTGATCGATGGCTTCGGTTTGATGCTACAGCTCTTGATGTTGCTCAAATATACTGCCTTAGGGAGCGCCTAGCATCAGCTATTCTTTTCAAAGTCAAACATCCACAGGATGTCCTCCCACCTGATCTTGGAGCAACTATGTATGCTATTGCGTGCATCCTATCATACGATGGCTTGCCTGCTATGATTACATCTGATGATGTTGCTACAAGTCAGGGTTCAAACCAAAGTTCAGCTGAATCAAGCAGATTCTCTCAGGGTCGTAGAGTCGGTTATATTCCACCTGGCGGTTTCCTCATGTCTTTGTTATCGGATAAACCTCTTAATGCGCCTCATTTTCAGAAGTCCTTTAATCATCCAGATGGAGCTTCAGGGCATATTCGGTCATCGAGGACCTCCGTCGGTAGATTTGATCAGTCTCGCCATCCTCAACGTAATAATTCTGGACCTGGGAGTTCAGCAGCACGGACTTTCAAAAGACAGCGCAACGGTGCACAGTGACTCTGGACTAGCGGCCGCGTTTTGCAGATCCTTCGGCTATGCTGGAATATTGGATGAAAGGCTTTTGTGGCAGAAATAAAGGATTGCTGTCTTGGCCGGGAGTTAAATAGGACTTGCAGCCTTCCTTTGTTGAAGGGCCATACGATGGCAACGTGATGCCTTGAGCTGAAATCATAATCCAGAAACGCTGTTTTGCTGGTGACTTGCAGCCTTCCTTTGTTCGGTGCACGTTGCTATTCTGTTCAGCTCTGCTTCCCAACTTGAGCGTGCCTTGTAATCTGATGGCAAGGCGACGCCATGCCATGCCACAGTCCACTGGTGTCTAACCACCAAATTGTACTCGTTGGAAGAGTGACCCATACAGGCTCAACGGGAGTCTGAATTCTGATGTCCCTCATACAGCCATACAGGAGTAGTAGGTTGGTAGTCTGAAACTTTTGTTTTGCTCTGATGATGTACGTGAAGAAGTGGTGTGTTTCCCTTCTTCGACCTATGGTTCTTTTATAGTACTGGAGTAGTACAGTAGTACTAGTAGTACATGCGCCTAAATTCTCCATGCCATGTGTAACCACAGTGATGTTATGCCGTGCGCCTAAATTTTCCCGTTCTGGTTTGAGATAGCAGTCGCACCCAGAGACGCTGCGGGCCTGTTGGGAAGCTGGATAAGCAGCTGAGCTCCTGATAATCTGGAAAAGTTGGGTTTCACAACTTCTGGTTTTTAGGTTATTTTCAGGATTTTACAAATATAGCTTCTCAGAATCATTGAAAGCTAGACTATTTAGGGAGCTTCTGATTATAAGAGGAACTGCAGCAATTCCGAGAG
CDS Sequence
- >LOC_Os01g56190.1
ATGGTGAGGAGAGGGCGGAAGGGCAAGGACGCGGCGGCTGGCGCCGGCGGCACCGGTGGCAGAGGCGGCGGTGCCGGCAGAGGAGGCGGCAGAGGAGGAAGCGGCGGCGGGGGCGGGGGAGGGGGTGTTCGGGAGGCGACGCTGGTGCGCGTCTCGAAAGTGCTCGAGGACTTCCAAGCCTCCGACGCCCAGGTGTACAAATTTGAACCTGGCATATCGAAACAAGAGCGAGCGGCGATACATGAGATGTGTAGAAAAATGGGCATGATATCCAAAAGTTCTGGGAATGGGGAACGACGATGCCTATCTGTTTACAAAAGAAAACAGAACCAGGGCCTTGAAACAGAAGAAGGACCTAGCCATCTTGGATTTTCTGTGGAAGCGAGAAATGTTTTGCAAGATCTATTTATGCATTATCCCCCAGATGATGCGGAGCTAAATGGGCATACTGTCAGGAATTCTAGTGATAAGGCTGTAAAGATTCAGTGGAAGCCAGATGGTGCATTTTGTAGGCCAGCATTGCGCAAACCGGATATATTGAAGAAGGTGGAGATGCTTGCATCGAAAGTAAATAAATCCGAACAGTTGAGGAAGATTGTCCAAGATAGATCTAAACTTCCAATTTCCTCATACAAGGATGCAATTTCTTCGACTTTAGAGAATCACCAGGTGGTTCTTATTTCTGGAGAAACAGGATGTGGTAAAACAACACAGGTTCCTCAATATATCTTGGATCATATGTGGGGTAAGGGTGAATCATGTAAGATTGTATGCACTCAACCAAGGCGAATATCAGCTATCTCAGTTGCTGAGAGAATCTCTGCGGAAAGAGGAGAGTCTGTGGGTGACACAGTTGGGTATAAGATACGCTTGGAGTCAAAAGGAGGGAAGAACTCATCAATCATGTTCTGCACAAATGGTGTTCTTTTGAGGCTATTGATAGGCAGGGTAACTAATATTTCAAAAGAACAAAATCAGAAACGCTCATTTGATGATGCAGTTACTGGGATAACACATATTATTGTGGATGAAATCCATGAAAGGGACAGGTTTTCAGATTTCATGTTGGCTATTCTAAGAGATTTGCTGCCGTTGTATCCTCATCTGCGTTTGGTACTCATGAGTGCAACGATTGATGCTGAGCGGTTCTCAAATTATTTCAGTGGATGCCCATTTATTCAAGTCCCAGGGTTTACCCATCCTGTCAAAACTTTCTATTTGGAGGATGTGCTTTCTATTTTGCAATCTGTAGGCGATAATCATCTTGATCCTACAACAGATGATCTGAAACAGAGCAGTTTGTTAACAGATGATTACAAAAGCTCAATGGATGAAGCCATTAACCTAGCTTTGGATAATGATGAATTTGATCCTCTTCTTGAGCTTATTTCTGCTGAGCAGAACCAAGAAATTTTCAATTACCAGCACTCAGAAACTGGTGTGACACCTTTGATGGTTCTTGCTGGAAAAGGTCAGGTTGGGGACATTTGCATGCTTCTATCATTTGGGGTGGATTGTTCTACACGGGATCATGATGGAAAATCTGCATTAGGTTGGGCAGAACAAGGGAATCAGCAAGAGGTTTGCGAAGTTATTAAGAAACATATGGAATGTGGTTCAGCAAAGTTAACTGAAGAGAATGAGCTGCTCAATAAATACTTGGCAACCATCAATCCTGAGCACATCGATACTGTGCTAATAGAACGGTTGCTCAGAAAAATTTGTGTTGATTCCAATGAAGGAGCTATCTTGGTGTTTCTTCCTGGGTGGGAAGATATAAATCAAACACGGGAAAGGTTGCTTGCTTCTCCCTTCTTTCAGGATTCGTCAAAGTTTCTTGTGTTGTCACTCCATTCCATGATCCCATCTTCGGAGCAGAAAAAAGTTTTCAAGCGTCCACCAGCAGGATCTCGTAAAATAATTCTCTCAACCAACATAGCAGAGACTGCTGTGACAATTGATGACGTCGTATTTGTCATAGATAGTGGGAGAATGAAAGAGAAAAGTTATGATCCATATAATAATGTCTCAACACTTCATTCTTCCTGGGTTTCAAAAGCTAATGCCAGACAACGTCAAGGGCGTGCGGGTCGTTGTCAGCCAGGAACGTGCTACCATCTCTACTCTAGATTTCGAGCAGCCTCATTACTGGAATACCAAATCCCTGAAATAAAGAGGATGCCTATTGAGGAACTATGTTTACAGGTCAAACTGCTTGATCCGAACTGCAGAATTGCAGACTTTTTAAGGAAAACTTTGGACCCTCCAATTCCAGAAACTGTAAGAAATGCTATCACCGTACTTCAGGATCTTGGTGCTTTGACTCAAGATGAACAACTGACAGAGTTAGGGGAAAAGTTGGGCTCCCTTCCGGTCCATCCATCTACAAGCAAGATGCTCTTGTTTGGTATATTAATGAATTGCCTAGATCCGGCGTTGACATTGGCATGTGCAGCAGATTATAGAGATCCTTTCCTCCTTCCAATGGCTCCAGATGAGAGGAAAAGGGCTGCTGCAGCCAAAGTTGAGCTTGCTTCATTGTATGGTGGATACAGTGATCAGCTTGCAGTTGTAGCAGCAATGGACTGTTGGAGACGTGCCAAAGATAGGGGCCAAGAAGCTCAATTTTGTTCTAAGTATTTTGTGTCTTCTAACACCATGAATATGCTTTCAAACATGAGGAAACAGCTTCAGAATGAACTAGCCCAAAGAGGATTTGTTCCTGTAGATGCATCTGCATGCAGCTTAAATGCTAGAGATCCAGGTATCATTCGTGCTGTCCTTATGGCCGGTGCTTATCCAATGGTAGGGAGATTGCTTCCCCCTCGCAAAAATACTAGAAGAGCAGTCATTGAAACAGCAAGTGGTGCCAAAGTTCGACTGCATCCACATTCTTGCAACTTTAACTTGTCTTTCCGTAAGACTTCTGGGAACCCATTAGTGATATATGATGAGATCACTCGAGGCGATGGTGGAATGTACATAAAAAACTCTTCGGTTGTTGGGTCCTATCCTTTAATTATTCTTGCTACGGAAATGGTTGTTGCTCCACCTGAGGACGATGATAGTGATGAAGAGGATGGGGATTCTAGTGAGGATGAAACTGAGAAAGTCACTTTGGGACAACATAAAGAGATAATGTCTTCTCCTGATAACTCTGTTTCAGTTGTTATTGATCGATGGCTTCGGTTTGATGCTACAGCTCTTGATGTTGCTCAAATATACTGCCTTAGGGAGCGCCTAGCATCAGCTATTCTTTTCAAAGTCAAACATCCACAGGATGTCCTCCCACCTGATCTTGGAGCAACTATGTATGCTATTGCGTGCATCCTATCATACGATGGCTTGCCTGCTATGATTACATCTGATGATGTTGCTACAAGTCAGGGTTCAAACCAAAGTTCAGCTGAATCAAGCAGATTCTCTCAGGGTCGTAGAGTCGGTTATATTCCACCTGGCGGTTTCCTCATGTCTTTGTTATCGGATAAACCTCTTAATGCGCCTCATTTTCAGAAGTCCTTTAATCATCCAGATGGAGCTTCAGGGCATATTCGGTCATCGAGGACCTCCGTCGGTAGATTTGATCAGTCTCGCCATCCTCAACGTAATAATTCTGGACCTGGGAGTTCAGCAGCACGGACTTTCAAAAGACAGCGCAACGGTGCACAGTGA
Protein Sequence
- >LOC_Os01g56190.1
MVRRGRKGKDAAAGAGGTGGRGGGAGRGGGRGGSGGGGGGGGVREATLVRVSKVLEDFQASDAQVYKFEPGISKQERAAIHEMCRKMGMISKSSGNGERRCLSVYKRKQNQGLETEEGPSHLGFSVEARNVLQDLFMHYPPDDAELNGHTVRNSSDKAVKIQWKPDGAFCRPALRKPDILKKVEMLASKVNKSEQLRKIVQDRSKLPISSYKDAISSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGESCKIVCTQPRRISAISVAERISAERGESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIGRVTNISKEQNQKRSFDDAVTGITHIIVDEIHERDRFSDFMLAILRDLLPLYPHLRLVLMSATIDAERFSNYFSGCPFIQVPGFTHPVKTFYLEDVLSILQSVGDNHLDPTTDDLKQSSLLTDDYKSSMDEAINLALDNDEFDPLLELISAEQNQEIFNYQHSETGVTPLMVLAGKGQVGDICMLLSFGVDCSTRDHDGKSALGWAEQGNQQEVCEVIKKHMECGSAKLTEENELLNKYLATINPEHIDTVLIERLLRKICVDSNEGAILVFLPGWEDINQTRERLLASPFFQDSSKFLVLSLHSMIPSSEQKKVFKRPPAGSRKIILSTNIAETAVTIDDVVFVIDSGRMKEKSYDPYNNVSTLHSSWVSKANARQRQGRAGRCQPGTCYHLYSRFRAASLLEYQIPEIKRMPIEELCLQVKLLDPNCRIADFLRKTLDPPIPETVRNAITVLQDLGALTQDEQLTELGEKLGSLPVHPSTSKMLLFGILMNCLDPALTLACAADYRDPFLLPMAPDERKRAAAAKVELASLYGGYSDQLAVVAAMDCWRRAKDRGQEAQFCSKYFVSSNTMNMLSNMRKQLQNELAQRGFVPVDASACSLNARDPGIIRAVLMAGAYPMVGRLLPPRKNTRRAVIETASGAKVRLHPHSCNFNLSFRKTSGNPLVIYDEITRGDGGMYIKNSSVVGSYPLIILATEMVVAPPEDDDSDEEDGDSSEDETEKVTLGQHKEIMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPDLGATMYAIACILSYDGLPAMITSDDVATSQGSNQSSAESSRFSQGRRVGYIPPGGFLMSLLSDKPLNAPHFQKSFNHPDGASGHIRSSRTSVGRFDQSRHPQRNNSGPGSSAARTFKRQRNGAQ*