Gene Details:

Functional Descriptions:

  • Subcellular localization assay showed that the ST2 protein was located in mitochondria.
  • The ST2 gene was finely confined to a 27-kb region on chromosome 1 by the map-based cloning strategy and a 5-bp deletion in Os01g0765000 was identified by sequence analysis.
  • The expression of nuclear and plastid genome replication genes was down-regulated under decreased dTTP, and together with decreased cell proliferation and defective chloroplast development in the ALR mutant this demonstrated the molecular and physiological roles of DCD-mediated dNTP pool balance in plant development.
  • ALR encoding dCMP deaminase is critical for DNA damage repair, cell cycle progression and plant development in rice.
  • Map-based cloning and complementation revealed that ALR encodes a DCD protein.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os01g55974.2
    AGTCTCCCTCCGGACCCAAGCCCCGCTCGAGCGAGCGCGATGGCCTCGGCGAGGGACCTCGCCGTAGCGTCCATCTCCGCCGCCGTGGGCGCCGCAGCCGCCGCGGCCGCGCTGCGCTTCCTGTCATCCTACGGGGCCAGCTCTGCCAAGCAGCGGAGCCCGCCCACGCCGTGCGCCGAGCACCTCGCGGTCAACGGATGCGCCGCCGAGCGCCCGCCGGTGCAGTCCCCCTTCGATCCCGCCAAGAGGGAAGGGTATATCTCCTGGGACGACTACTTCATGGCGATCGCGTTCCTTTCGGCCAAGCGGTCCAAGGATCCTAATCGGCAGGTTGGAGCATGCTTGGTTAGCCAAGAGGGGATAATCCTAGGAATAGGGTATAATGGATTTCCTAGAGGTTGTTCTGACAATAAGCTACCCTGGGCAAAGAAATCTGCCAAGGGAGATCCATTGGAGACAAAATACCCCTATGTTGTTCATGCTGAGGTTAATGCTATTTTAAATACAAACCATGCTTCAGCGGCTGGACAGAAATTATATGTTACCATGTTCCCCTGCAATGAGTGTGCTAAGATTATTATCCAGTCAGGTGTATCTGAAGTCATATATTTTGTAGAGAAAAGGATTGACAACTCTGATTATGTTTACGTAGCCTCGCACAAGTTGTTATCAATGGCTGGTGTAAAGGTTAGGAAACACCAACCACAGATGTCACAAATACCAATCAAGTTTCAGGAGCCTCGAAACGATTTCTGTTGATCATGGCATCAAAGAACAAATGCTTGTCAGTCATTCAACGTCATCGATTGCCATATCCTCCGGGGTGCTGTTGACCGTCTTGTTGTAAACTTGTAATCCGTGAGACTACTAGATCATCAAAACAAATTATGGCTGTGTTTAGTTCAGCGCAAAATTTAGATTTTGGTTGAAATTGAAGATGATGTGACTGAAAAGTTGTGTATATGACAGGTTGATGTGATAGAAAAGGACTGAAGTTTGGATTCAAACTTTAGATCTAAACACAGCGTATATATATACTTCTTCCAACAACATTA
  • >LOC_Os01g55974.3
    AGTCTCCCTCCGGACCCAAGCCCCGCTCGAGCGAGCGCGATGGCCTCGGCGAGGGACCTCGCCGTAGCGTCCATCTCCGCCGCCGTGGGCGCCGCAGCCGCCGCGGCCGCGCTGCGCTTCCTGTCATCCTACGGGGCCAGCTCTGCCAAGCAGCGGAGCCCGCCCACGCCGTGCGCCGAGCACCTCGCGGTCAACGGATGCGCCGCCGAGCGCCCGCCGGTGCAGTCCCCCTTCGATCCCGCCAAGAGGGAAGGGTATATCTCCTGGGACGACTACTTCATGGCGATCGCGTTCCTTTCGGCCAAGCGGTCCAAGGATCCTAATCGGCAGGTTGGAGCATGCTTGGTTAGCCAAGAGGGGATAATCCTAGGAATAGGGTATAATGGATTTCCTAGAGGTTGTTCTGACAATAAGCTACCCTGGGCAAAGAAATCTGCCAAGGGAGATCCATTGGAGACAAAATACCCCTATGTTGTTCATGCTGAGGTTAATGCTATTTTAAATACAAACCATGCTTCAGCGGCTGGACAGAAATTATATGTTACCATGTTCCCCTGCAATGAGTGTGCTAAGATTATTATCCAGTCAGGTGTATCTGAAGTCATATATTTTGTAGAGAAAAGGATTGACAACTCTGATTATGTTTACGTAGCCTCGCACAAGTTGTTATCAATGGCTGGTGTAAAGGTTAGGAAACACCAACCACAGATGTCACAAATACCAATCAAGTTTCAGGAGCCTCGAAACGATTTCTGTTGATCATGGCATCAAAGAACAAATGCTTGTCAGTCATTCAACGTCATCGATTGCCATATCCTCCGGGGTGCTGTTGACCGTCTTGTTGTAAACTTGTAATCCGTGAGACTACTAGATCATCAAAACAAATTATGGCTGTGTTTAGTTCAGCGCAAAATTTAGATTTTGGTTGAAATTGAAGATGATGTGACTGAAAAGTTGTGTATATGACAGGTTGATGTGATAGAAAAGGACTGAAGTTTGGATTCAAACTTTAGATCTAAACACAGCGTATATATATACTTCTTCCAACAACATTA
  • >LOC_Os01g55974.1
    AGTCTCCCTCCGGACCCAAGCCCCGCTCGAGCGAGCGCGATGGCCTCGGCGAGGGACCTCGCCGTAGCGTCCATCTCCGCCGCCGTGGGCGCCGCAGCCGCCGCGGCCGCGCTGCGCTTCCTGTCATCCTACGGGGCCAGCTCTGCCAAGCAGCGGAGCCCGCCCACGCCGTGCGCCGAGCACCTCGCGGTCAACGGATGCGCCGCCGAGCGCCCGCCGGTGCAGTCCCCCTTCGATCCCGCCAAGAGGGAAGGGTATATCTCCTGGGACGACTACTTCATGGCGATCGCGTTCCTTTCGGCCAAGCGGTCCAAGGATCCTAATCGGCAGGTTGGAGCATGCTTGGTTAGCCAAGAGGGGATAATCCTAGGAATAGGGTATAATGGATTTCCTAGAGGTTGTTCTGACAATAAGCTACCCTGGGCAAAGAAATCTGCCAAGGGAGATCCATTGGAGACAAAATACCCCTATGTTGTTCATGCTGAGGTTAATGCTATTTTAAATACAAACCATGCTTCAGCGGCTGGACAGAAATTATATGTTACCATGTTCCCCTGCAATGAGTGTGCTAAGATTATTATCCAGTCAGGTGTATCTGAAGTCATATATTTTGTAGAGAAAAGGATTGACAACTCTGATTATGTTTACGTAGCCTCGCACAAGTTGTTATCAATGGCTGGTGTAAAGGTTAGGAAACACCAACCACAGATGTCACAAATACCAATCAAGTTTCAGGAGCCTCGAAACGATTTCTGTTGATCATGGCATCAAAGAACAAATGCTTGTCAGTCATTCAACGTCATCGATTGCCATATCCTCCGGGGTGCTGTTGACCGTCTTGTTGTAAACTTGTAATCCGTGAGACTACTAGATCATCAAAACAAATTATGGCTGTGTTTAGTTCAGCGCAAAATTTAGATTTTGGTTGAAATTGAAGATGATGTGACTGAAAAGTTGTGTATATGACAGGTTGATGTGATAGAAAAGGACTGAAGTTTGGATTCAAACTTTAGATCTAAACACAGCGTATATATATACTTCTTCCAACAACATTA
CDS Sequence
  • >LOC_Os01g55974.2
    ATGGCCTCGGCGAGGGACCTCGCCGTAGCGTCCATCTCCGCCGCCGTGGGCGCCGCAGCCGCCGCGGCCGCGCTGCGCTTCCTGTCATCCTACGGGGCCAGCTCTGCCAAGCAGCGGAGCCCGCCCACGCCGTGCGCCGAGCACCTCGCGGTCAACGGATGCGCCGCCGAGCGCCCGCCGGTGCAGTCCCCCTTCGATCCCGCCAAGAGGGAAGGGTATATCTCCTGGGACGACTACTTCATGGCGATCGCGTTCCTTTCGGCCAAGCGGTCCAAGGATCCTAATCGGCAGGTTGGAGCATGCTTGGTTAGCCAAGAGGGGATAATCCTAGGAATAGGGTATAATGGATTTCCTAGAGGTTGTTCTGACAATAAGCTACCCTGGGCAAAGAAATCTGCCAAGGGAGATCCATTGGAGACAAAATACCCCTATGTTGTTCATGCTGAGGTTAATGCTATTTTAAATACAAACCATGCTTCAGCGGCTGGACAGAAATTATATGTTACCATGTTCCCCTGCAATGAGTGTGCTAAGATTATTATCCAGTCAGGTGTATCTGAAGTCATATATTTTGTAGAGAAAAGGATTGACAACTCTGATTATGTTTACGTAGCCTCGCACAAGTTGTTATCAATGGCTGGTGTAAAGGTTAGGAAACACCAACCACAGATGTCACAAATACCAATCAAGTTTCAGGAGCCTCGAAACGATTTCTGTTGA
  • >LOC_Os01g55974.3
    ATGGCCTCGGCGAGGGACCTCGCCGTAGCGTCCATCTCCGCCGCCGTGGGCGCCGCAGCCGCCGCGGCCGCGCTGCGCTTCCTGTCATCCTACGGGGCCAGCTCTGCCAAGCAGCGGAGCCCGCCCACGCCGTGCGCCGAGCACCTCGCGGTCAACGGATGCGCCGCCGAGCGCCCGCCGGTGCAGTCCCCCTTCGATCCCGCCAAGAGGGAAGGGTATATCTCCTGGGACGACTACTTCATGGCGATCGCGTTCCTTTCGGCCAAGCGGTCCAAGGATCCTAATCGGCAGGTTGGAGCATGCTTGGTTAGCCAAGAGGGGATAATCCTAGGAATAGGGTATAATGGATTTCCTAGAGGTTGTTCTGACAATAAGCTACCCTGGGCAAAGAAATCTGCCAAGGGAGATCCATTGGAGACAAAATACCCCTATGTTGTTCATGCTGAGGTTAATGCTATTTTAAATACAAACCATGCTTCAGCGGCTGGACAGAAATTATATGTTACCATGTTCCCCTGCAATGAGTGTGCTAAGATTATTATCCAGTCAGGTGTATCTGAAGTCATATATTTTGTAGAGAAAAGGATTGACAACTCTGATTATGTTTACGTAGCCTCGCACAAGTTGTTATCAATGGCTGGTGTAAAGGTTAGGAAACACCAACCACAGATGTCACAAATACCAATCAAGTTTCAGGAGCCTCGAAACGATTTCTGTTGA
  • >LOC_Os01g55974.1
    ATGGCCTCGGCGAGGGACCTCGCCGTAGCGTCCATCTCCGCCGCCGTGGGCGCCGCAGCCGCCGCGGCCGCGCTGCGCTTCCTGTCATCCTACGGGGCCAGCTCTGCCAAGCAGCGGAGCCCGCCCACGCCGTGCGCCGAGCACCTCGCGGTCAACGGATGCGCCGCCGAGCGCCCGCCGGTGCAGTCCCCCTTCGATCCCGCCAAGAGGGAAGGGTATATCTCCTGGGACGACTACTTCATGGCGATCGCGTTCCTTTCGGCCAAGCGGTCCAAGGATCCTAATCGGCAGGTTGGAGCATGCTTGGTTAGCCAAGAGGGGATAATCCTAGGAATAGGGTATAATGGATTTCCTAGAGGTTGTTCTGACAATAAGCTACCCTGGGCAAAGAAATCTGCCAAGGGAGATCCATTGGAGACAAAATACCCCTATGTTGTTCATGCTGAGGTTAATGCTATTTTAAATACAAACCATGCTTCAGCGGCTGGACAGAAATTATATGTTACCATGTTCCCCTGCAATGAGTGTGCTAAGATTATTATCCAGTCAGGTGTATCTGAAGTCATATATTTTGTAGAGAAAAGGATTGACAACTCTGATTATGTTTACGTAGCCTCGCACAAGTTGTTATCAATGGCTGGTGTAAAGGTTAGGAAACACCAACCACAGATGTCACAAATACCAATCAAGTTTCAGGAGCCTCGAAACGATTTCTGTTGA
Protein Sequence
  • >LOC_Os01g55974.2
    MASARDLAVASISAAVGAAAAAAALRFLSSYGASSAKQRSPPTPCAEHLAVNGCAAERPPVQSPFDPAKREGYISWDDYFMAIAFLSAKRSKDPNRQVGACLVSQEGIILGIGYNGFPRGCSDNKLPWAKKSAKGDPLETKYPYVVHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKRIDNSDYVYVASHKLLSMAGVKVRKHQPQMSQIPIKFQEPRNDFC*
  • >LOC_Os01g55974.3
    MASARDLAVASISAAVGAAAAAAALRFLSSYGASSAKQRSPPTPCAEHLAVNGCAAERPPVQSPFDPAKREGYISWDDYFMAIAFLSAKRSKDPNRQVGACLVSQEGIILGIGYNGFPRGCSDNKLPWAKKSAKGDPLETKYPYVVHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKRIDNSDYVYVASHKLLSMAGVKVRKHQPQMSQIPIKFQEPRNDFC*
  • >LOC_Os01g55974.1
    MASARDLAVASISAAVGAAAAAAALRFLSSYGASSAKQRSPPTPCAEHLAVNGCAAERPPVQSPFDPAKREGYISWDDYFMAIAFLSAKRSKDPNRQVGACLVSQEGIILGIGYNGFPRGCSDNKLPWAKKSAKGDPLETKYPYVVHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKRIDNSDYVYVASHKLLSMAGVKVRKHQPQMSQIPIKFQEPRNDFC*