Gene Details:
- MSU gene ID: LOC_Os01g54210
- RAPdb gene ID: Os01g0745700
- Gene Symbol: OsGATA6
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The transcription factor OsGATA6 regulates rice heading date and grain number per panicle.
- Further analyses showed that OsGATA6 could bind to the promoter of OsMFT1 and induce its expression, thereby regulating heading date and panicle development.
- Overexpression of OsGATA6 resulted in delayed heading, increased grain number, and decreased grain size.
- Knockdown lines generated by artificial microRNA (amiRNA) and CRISPR genome-edited lines of OsGATA6 both showed earlier heading, decreased grain number, and increased grain size.
- These results suggested that OsGATA6 negatively regulates heading date, positively regulates panicle development, and affects grain size.
- In situ hybridization analyses showed that OsGATA6 was specifically localized in superficial cells of the panicle primordium.
Function-related keywords:
- transcription-factor , development , grain , grain-size , panicle , grain-number , heading-date , panicle-development
Literature:
- The transcription factor OsGATA6 regulates rice heading date and grain number per panicle . DOI: 10.1093/jxb/erac247 ; PMID: 35662326
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g54210.1
AGCTGACCTCTCTCCGCCCCGCCTCCCCTTCCGTCTCTCCGCGCTCCAGCTCCACGCCAATTAAACCCTACTCCTCTTGCGTTGCGTTATCTGCGGTTCCGTCTCCCACTACTCGCGCACACGTAGAAACGGAAGGAGAAACAAACAAAAGGCGCCGAGTAACGCAGATAGAGAGTTGTTTCCGCACCGAGCGCGTCCGCGGCAGTGTGTGTGTGTAGCGGTAGCGCACGCGCGGCTCGCGGGCGCGCCGGTTGCACCAGCTGTGCGTTGCGGCGACGATGGAGGTGACGGCCGAGTTCGGCGGCGCCTACTACGGCGGCGCGGCGGGCCGCGAGAAGAAGGCGCTGCAGCAGGGGTGCGGGGACCACTTCGCCGTGGACGACCTCCTCGTGTTGCCCTACGGCGAGGAGGATGAAACAACAAGGGAGGGTGAGGCCACCGGCGGTAAGGAGGAGGCTGCCGGCTTTGGGAACGCGTCGGCGGACTCGTCGACCATAACGGCCCTGGATAGCTGCAGCAATTCCTTCGGCCTAGCCGACGGCGACTTCCCCGGCGAGCTGTGCGAGCCGTACGATCAACTCGCGGAGCTGGAATGGCTATCCAACTATATGAACGAGGGAGACGACGCATTCGCCACCGAGGACCTCCAGAAGCTGCAGCTCATCTCCGGCATCCCCTCCGGTGGGTTCTCGACGGCGAGCGTCCCGTCGGCTCAAGCTCAAGCTGCGTCGGCGGCTGCCTCCATGGCAGTGCAGCCCGGCGGCTTCCTGCCGGAGGCCCCTGTCCCCGCCAAGGCACGAAGCAAGCGCTCCCGCGCTGCGCCTGGCAACTGGTCGTCCCGCCTGCTCGTGCTGCCGCCGCCTCCGGCCTCCCCGCCGTCCCCGGCATCCATGGCCATCTCGCCGGCGGAGTCTGGCGTGTCGGCGCATGCGTTCCCTATTAAGAAGCCGTCGAAGCCGGCTAAGAAGAAAGACGCGCCGGCGCCACCGGCGCAGGCGCAGCTCTCGAGCGTGCCGGTGCACTCGGGCGGCTCGGCGCCAGCGGCCGCGGCCGGGGAAGGGAGGCGGTGCCTGCACTGCGAGACTGACAAGACGCCACAGTGGAGGACGGGGCCGATGGGGCCCAAGACACTGTGCAACGCGTGCGGGGTGCGGTACAAGTCCGGGCGACTGGTGCCGGAGTACCGGCCGGCGGCGAGCCCCACCTTCATGGTATCGAAGCACTCCAACTCCCACCGCAAGGTGCTGGAGCTGCGCCGGCAGAAGGAGATGCACCAGCAGACGCCGCATCATCACCAGCCGCAGGTGGCCGCCGCCGGTGGAGTGGGGAGCCTAATGCACATGCAGAGCTCCATGCTGTTCGACGGAGTGTCGCCCGTCGTGAGCGGCGACGACTTCTTGATCCACCACCACCTAAGGACAGACTTCCGGCCGCCCATCTAGAGATGAGTCGTGTGCTAGAATTGATCAATTAGCCCATGAATAATCTAAAAGAAACCCTTGAACCAAAAAAAAAACAGAAGAACTGATATTTTCTTAGGAGTTTCCCCAGTTTTTGTCTCTTTTCCCTTCGTTTAGTTTGTGCGCTTTTGCTCAGCTCGTCGAATTTTTCGTGTCAATTTTGTTTATGATGCTCTTTAAGTTTACCACCTTTTCTAGCCGGGAGTTGATTTCTCTAGCTTCTACTTATCTTCCTCTCTATCTTGCCATTTAATTTGTAACGCATTTCAAGGTACTTAAATCTCTTCTTCC
CDS Sequence
- >LOC_Os01g54210.1
ATGGAGGTGACGGCCGAGTTCGGCGGCGCCTACTACGGCGGCGCGGCGGGCCGCGAGAAGAAGGCGCTGCAGCAGGGGTGCGGGGACCACTTCGCCGTGGACGACCTCCTCGTGTTGCCCTACGGCGAGGAGGATGAAACAACAAGGGAGGGTGAGGCCACCGGCGGTAAGGAGGAGGCTGCCGGCTTTGGGAACGCGTCGGCGGACTCGTCGACCATAACGGCCCTGGATAGCTGCAGCAATTCCTTCGGCCTAGCCGACGGCGACTTCCCCGGCGAGCTGTGCGAGCCGTACGATCAACTCGCGGAGCTGGAATGGCTATCCAACTATATGAACGAGGGAGACGACGCATTCGCCACCGAGGACCTCCAGAAGCTGCAGCTCATCTCCGGCATCCCCTCCGGTGGGTTCTCGACGGCGAGCGTCCCGTCGGCTCAAGCTCAAGCTGCGTCGGCGGCTGCCTCCATGGCAGTGCAGCCCGGCGGCTTCCTGCCGGAGGCCCCTGTCCCCGCCAAGGCACGAAGCAAGCGCTCCCGCGCTGCGCCTGGCAACTGGTCGTCCCGCCTGCTCGTGCTGCCGCCGCCTCCGGCCTCCCCGCCGTCCCCGGCATCCATGGCCATCTCGCCGGCGGAGTCTGGCGTGTCGGCGCATGCGTTCCCTATTAAGAAGCCGTCGAAGCCGGCTAAGAAGAAAGACGCGCCGGCGCCACCGGCGCAGGCGCAGCTCTCGAGCGTGCCGGTGCACTCGGGCGGCTCGGCGCCAGCGGCCGCGGCCGGGGAAGGGAGGCGGTGCCTGCACTGCGAGACTGACAAGACGCCACAGTGGAGGACGGGGCCGATGGGGCCCAAGACACTGTGCAACGCGTGCGGGGTGCGGTACAAGTCCGGGCGACTGGTGCCGGAGTACCGGCCGGCGGCGAGCCCCACCTTCATGGTATCGAAGCACTCCAACTCCCACCGCAAGGTGCTGGAGCTGCGCCGGCAGAAGGAGATGCACCAGCAGACGCCGCATCATCACCAGCCGCAGGTGGCCGCCGCCGGTGGAGTGGGGAGCCTAATGCACATGCAGAGCTCCATGCTGTTCGACGGAGTGTCGCCCGTCGTGAGCGGCGACGACTTCTTGATCCACCACCACCTAAGGACAGACTTCCGGCCGCCCATCTAG
Protein Sequence
- >LOC_Os01g54210.1
MEVTAEFGGAYYGGAAGREKKALQQGCGDHFAVDDLLVLPYGEEDETTREGEATGGKEEAAGFGNASADSSTITALDSCSNSFGLADGDFPGELCEPYDQLAELEWLSNYMNEGDDAFATEDLQKLQLISGIPSGGFSTASVPSAQAQAASAAASMAVQPGGFLPEAPVPAKARSKRSRAAPGNWSSRLLVLPPPPASPPSPASMAISPAESGVSAHAFPIKKPSKPAKKKDAPAPPAQAQLSSVPVHSGGSAPAAAAGEGRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKHSNSHRKVLELRRQKEMHQQTPHHHQPQVAAAGGVGSLMHMQSSMLFDGVSPVVSGDDFLIHHHLRTDFRPPI*