Information report for OsYUCCA3
Gene Details
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Functional Descriptions
- This stabilizes OsYUCCA3 mRNA and promotes local auxin biosynthesis in anthers during male meiosis, which is essential for meiotic division and subsequent pollen development in rice.
- Our findings reveal that OsFAP1-dependent m(6)A deposition on OsYUCCA3 by OsFIP37 constitutes a hitherto unknown link between RNA modification and hormonal control of male meiosis in plant reproductive development.
Functional Keywords
Literature and News
- Auxin biosynthesis by the YUCCA genes in rice . DOI: 10.1104/pp.106.091561 ; PMID: 17220367
- Cadmium Inhibits Lateral Root Emergence in Rice by Disrupting OsPIN-Mediated Auxin Distribution and the Protective Effect of OsHMA3 . DOI: 10.1093/pcp/pcaa150 ; PMID: 33300991
- RNA N6-methyladenosine modification promotes auxin biosynthesis required for male meiosis in rice . DOI: 10.1016/j.devcel.2021.12.014 ; PMID: 35026163
Gene Resources
- UniProt: B9EZJ8
- EMBL: AP014957
- AlphaFoldDB: B9EZJ8
- EnsemblPlants: Os01t0732700-01
- Gramene: Os01t0732700-01
- Orthologous matrix: VCRWLIA
- InterPro: IPR020946, IPR036188, IPR050982
- PANTHER: PTHR43539, PTHR43539:SF38
- SUPFAM: SSF51905
- Gene3D: 3.50.50.60
- OrthoDB: B9EZJ8
- SWISS-MODEL: B9EZJ8
- eggNOG: KOG1399
Homologs
- Arabidopsis thaliana: AT1G04610, AT1G04180
- Capsicum annuum: Bs3-E, Bs3
- Cucumis sativus: CsYUC10b
- Glycine max: GmYUC2a, GmYUC2a
- Hordeum vulgare: HORVU7Hr1G007860
- Panicum virgatum: Pavir.9KG201100
- Triticum aestivum: TaYUC10.3
Sequences
cDNA Sequence
- >LOC_Os01g53200.1
ATGCATTCAAAAGCTGGGCATACAAACTATAGACGAGAGCCACCCTCGAGAACTTCCTCTCTTCTTCCGTTCATCCTTTTCCCTCTAGCTATTCTGTACTTAAACAACAATAGCAGTCCCGCTAGATTGCTCCACCAACCTCCTCAACACATCCAGGATTCTTACATATCATTCACTTCTTCACCAAGTCTTCTGGCGATACACAACATATCTGTTAGATCCTTTTCTGCCGTGCATGTGTTCATGTACAACAACGTCGAGATTGAAGCCAACACAGCCATGCACTACTAGCTAGATCGAGCAAACACCATTTGAAAGCCAATATACCTGCATGGACCCTTGGAGTGAAATTGAGGGCAAGAGAGCCCATGATCCTATCTTCCAAAACTACTTCAGCCAAAACTGCCGCCAATCTGTTGATGGTTTCTGCAAGAAGAGGAGCGCAGATGCTGCCGTCGCTCGCGCCGAGCGATGCATCCGGGTTCTGGGGCCAATCATCGTGGGTGCTGGACCATCAGGGCTCGCTGTTGCTGCATGTCTCAAGGAGAAGGGAGTTGACAGTCTTGTTCTCGAGCGCTCCAACTGCATAGCTTCCCTTTGGCAGCTGAAGACATACGATCGTCTCAGCCTTCATCTTCCTCGCCAATTCTGTGAGCTTCCCCTCATGCCTTTTCCTGCCTACTACCCTATTTATCCCTCAAAGCAGCAGTTTGTAGCCTACCTGGAGAGCTACGCTGCAAGGTTTGGGATCTGCCCCACGTACAACCGGACGGTGGTGTGTGCAGAATATGATGAGCAGCTTCAGTTATGGCGGGTGAGGACACGGGCCACCGGCATAATGGGAGAGGAGGTCGAGTATGTGTCTCGGTGGTTGGTTGTGGCCACCGGTGAGAACGCCGAGGTTGTGCTGCCAGAGATTGATGGCCTAGACGACTTCAAGGGAACTGTTATGCACACCAGTTCATATAAAAGTGGCGGTGCATTTGCTGGGAAGCGTGTTCTCGTTGTTGGGAGTGGCAACTCCGGCATGGAGGTGTGCCTAGACCTCTGCAACCACAATGCAAATCCCCATATTGTAGTAAGAGACGCTGTACACATCTTGCCCAGGGAGATGCTGGGTCAGTCCACCTTTGGGCTGTCAATGTGGCTGCTCAAGTGGCTCCCAGTCCACGTGGTGGACCGAATTCTACTGCTCATAGCTCAGACCATGCTTGGGGATACTGCTCAGCTTGGGCTAAAGCGTCCTACCATCGGTCCTCTCGAGCTCAAGTCACTCTCAGGGAAGACCCCAGTTCTTGACGTCGGCACATTTGCAAAGATTAAGTCTGGTGACATCAAGGTACGGCCGGCCATAAAACAAATATCAGGGAGACAGGTAGAGTTCATGGACACAAGGTTGGAGGAGTTTGATGTCATTGTGCTTGCCACCGGCTACAAGAGCAACGTTCCCTTCTGGTTAAAGGACCGGGAGTTGTTTTCCGAAAAGGATGGGTTGCCAAGGAAGGCATTTCCAAACGGTTGGAAGGGTGAGAACGGGCTCTACTCGGTCGGGTTCACCCGGCGCGGGCTGATGGGAACATCGGTGGATGCTCGGAGAATTGCTCACGACATTGAGCAGCAATGGAAGGCCAGAGGGAAGCACCCGGGCGTGTTGCTCTAGCTCCCCGTCCCCTCGTTCGCCACGGTTACGGGAGGCGTGTTCATCGGTCATGCATAAGCTTGTGAATACTAGCTAGTAGGTTTGGTGGTGATACGGTGATATTCTGCCGACTTCAACAACGGTGCGCTTGTTGTGGCCCAAAGGGTGTAATTGCGTGCGCCTGCTGCATGCTGCGTTGGTTCATTTTGATGCTTGTATAGGGTATTGTATTGTCAAGTTTTGTGCCTCCGTTTGCGTTTGATGACTAACCATCCTATGGGCTGCTCTGTATCATCCTCGGTGGAGTAATACTGAAGTGCCCATGTTCGACAATGGAGCTCTGTTTGGCCTCGACTGATCATCAATGAGTCAAGCTTGTTTTTTTCCT
CDS Sequence
- >LOC_Os01g53200.1
ATGGACCCTTGGAGTGAAATTGAGGGCAAGAGAGCCCATGATCCTATCTTCCAAAACTACTTCAGCCAAAACTGCCGCCAATCTGTTGATGGTTTCTGCAAGAAGAGGAGCGCAGATGCTGCCGTCGCTCGCGCCGAGCGATGCATCCGGGTTCTGGGGCCAATCATCGTGGGTGCTGGACCATCAGGGCTCGCTGTTGCTGCATGTCTCAAGGAGAAGGGAGTTGACAGTCTTGTTCTCGAGCGCTCCAACTGCATAGCTTCCCTTTGGCAGCTGAAGACATACGATCGTCTCAGCCTTCATCTTCCTCGCCAATTCTGTGAGCTTCCCCTCATGCCTTTTCCTGCCTACTACCCTATTTATCCCTCAAAGCAGCAGTTTGTAGCCTACCTGGAGAGCTACGCTGCAAGGTTTGGGATCTGCCCCACGTACAACCGGACGGTGGTGTGTGCAGAATATGATGAGCAGCTTCAGTTATGGCGGGTGAGGACACGGGCCACCGGCATAATGGGAGAGGAGGTCGAGTATGTGTCTCGGTGGTTGGTTGTGGCCACCGGTGAGAACGCCGAGGTTGTGCTGCCAGAGATTGATGGCCTAGACGACTTCAAGGGAACTGTTATGCACACCAGTTCATATAAAAGTGGCGGTGCATTTGCTGGGAAGCGTGTTCTCGTTGTTGGGAGTGGCAACTCCGGCATGGAGGTGTGCCTAGACCTCTGCAACCACAATGCAAATCCCCATATTGTAGTAAGAGACGCTGTACACATCTTGCCCAGGGAGATGCTGGGTCAGTCCACCTTTGGGCTGTCAATGTGGCTGCTCAAGTGGCTCCCAGTCCACGTGGTGGACCGAATTCTACTGCTCATAGCTCAGACCATGCTTGGGGATACTGCTCAGCTTGGGCTAAAGCGTCCTACCATCGGTCCTCTCGAGCTCAAGTCACTCTCAGGGAAGACCCCAGTTCTTGACGTCGGCACATTTGCAAAGATTAAGTCTGGTGACATCAAGGTACGGCCGGCCATAAAACAAATATCAGGGAGACAGGTAGAGTTCATGGACACAAGGTTGGAGGAGTTTGATGTCATTGTGCTTGCCACCGGCTACAAGAGCAACGTTCCCTTCTGGTTAAAGGACCGGGAGTTGTTTTCCGAAAAGGATGGGTTGCCAAGGAAGGCATTTCCAAACGGTTGGAAGGGTGAGAACGGGCTCTACTCGGTCGGGTTCACCCGGCGCGGGCTGATGGGAACATCGGTGGATGCTCGGAGAATTGCTCACGACATTGAGCAGCAATGGAAGGCCAGAGGGAAGCACCCGGGCGTGTTGCTCTAG
Protein Sequence
- >LOC_Os01g53200.1
MDPWSEIEGKRAHDPIFQNYFSQNCRQSVDGFCKKRSADAAVARAERCIRVLGPIIVGAGPSGLAVAACLKEKGVDSLVLERSNCIASLWQLKTYDRLSLHLPRQFCELPLMPFPAYYPIYPSKQQFVAYLESYAARFGICPTYNRTVVCAEYDEQLQLWRVRTRATGIMGEEVEYVSRWLVVATGENAEVVLPEIDGLDDFKGTVMHTSSYKSGGAFAGKRVLVVGSGNSGMEVCLDLCNHNANPHIVVRDAVHILPREMLGQSTFGLSMWLLKWLPVHVVDRILLLIAQTMLGDTAQLGLKRPTIGPLELKSLSGKTPVLDVGTFAKIKSGDIKVRPAIKQISGRQVEFMDTRLEEFDVIVLATGYKSNVPFWLKDRELFSEKDGLPRKAFPNGWKGENGLYSVGFTRRGLMGTSVDARRIAHDIEQQWKARGKHPGVLL*