Information report for OsATG6a
Gene Details
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Functional Descriptions
Literature and News
- Regulation of ATG6/Beclin-1 homologs by abiotic stresses and hormones in rice (Oryza sativa L.) . DOI: 10.4238/2012.August.17.3 ; PMID: 22930426
- Genome-wide identification, classification, and expression analysis of autophagy-associated gene homologues in rice (Oryza sativa L.) . DOI: 10.1093/dnares/dsr024 ; PMID: 21795261
Gene Resources
- UniProt: B9EYM1
- EMBL: AP008207, CM000138
- AlphaFoldDB: B9EYM1
- EnsemblPlants: Os01t0681400-01
- Gramene: Os01t0681400-01
- KEGG: dosa:Os01g0681400
- Orthologous matrix: WTKAMKC
- InterPro: IPR007243, IPR038274, IPR040455
- PANTHER: PTHR12768, PTHR12768:SF4
- Gene3D: 1.10.418.40
- OrthoDB: B9EYM1
- SWISS-MODEL: B9EYM1
Sequences
cDNA Sequence
- >LOC_Os01g48920.1
AGTATTATGTTATTATCCCTGACAGGTGGGCTCCACGTGTCAGCGACTGTTTGCTCGTTGCTGTTTGCTCCCGCGACGACGAATCCGTGCCGACCTCGCTTCCCCGCCGGCCGCCATGAAATTGGAGCTTCCGAGAGGAGAAAATCTCGAGAAGTAGAGAGAGAAAACCACAGCGTGAGCGAGCGTGGGCGTCCTTGATTCCGGCGACATGAAGGCCCCCGCCGCGGCCGCGGCCGCGGTCGGCAACAGGGCTGGTGGGGTGGATCCGTCGATTCCGCGGTTCAAGTGCCAGGAGTGCCACCGCGCGCTCGTCGTCGTCGGCGTGGATTCCTTCGCCGATAAGCTCCCGGCTCAGGCCACCTCTGCGCATGCATCCTCTGTTCATGGAAGTATTATGGGAGCTAGCAGGATGGATAATTCTTATGTCGTGCTATCCAAGCAAAACAAATCTCATGGCCATGGAATTCCCCCACGCCCACCAAGTGCAGCAGCCCCACATATCGAACCTAACCAGCCAACAAGAGCGATGGAGGGTTCATATATAGTGCTTCCACCTGCTGCTGCTTCCATATACAAGACATCTACTTCTGAAGGAGGTGGTGCGCAGTTGCCACCACCAAGTATCAATTCCAGTAGTTTGTTACCAGGAAATAGTTTTCACTCTAACGTGACTGTATTAAAACGGGCATTTGAGATTGCTACGTCACAAACTCAGGTTGAGCAGCCAATGTGTCTGGACTGTATGAGGTTGCTCTCTGATAAGATGGATAAGGAGATTGAAGATGTTAATGCTGACATTAAAGCTTATGAAGTCTGTCTTCAACATTTGGAGCAGGAATCCCACACTGTCCTCAGCGATGCTGGTTTTCAGAAGGAGAAACTGAAGATTGAAGAAGAAGAAAAGAAGCTTAACGCCGCTATTGAAGAAGCTGAAAAGCAATATTCAGAAATTAGTTCTGAGATGAAGGATCTTGAAATAAAATCTAAAGAATTTGAAGAATTGGAAGAAAGGTATTGGCATGAATTCAATAGCTTTCAGTTTCAGTTGACATCTCACCAGGAAGAAAGAGATGCAATTTTGGCCAAAATAGAAGTTTCACAGGTTCATTTGGAATTGCTGAAGCAAACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGAGTAATTGGAACAATAAACAACTTCCGACTCGGACGCCTTCCTAATGTACAGGTTGAATGGGATGAGATAAATGCTGCTTGGGGTCAGGCTGCTCTTCTTTTGCATACCATGGCTCAGTACTTCACCCCAAAATTTGAGTACCGGATTAAGATTCACCCTATGGGTAGCTACCCAAGAGTCACAGATATCCACAAAAATACATATGAACTGTTTGGTCCCGTGAATTTATTCTGGAGCACACGTTTTGACAAAGCCATGACATGGTTTCTAACCTGCCTGCAAGATTTTGCTGAGTTCGCTATTAGCTTGGATAAAGAGAACAATGTACCACCTGAGAAGTCATTAAAGCTCCCATACAAGATTGATGGTGACAAGGTAGGGAGCCACACAATCTTCTTAAGTTTTAATAAAGTGGAGAACTGGACGAAAGCACTAAAATACACGCTGTGCAACTTGAAGTGGGTCCTCTACTGGTTTATCGGCAATACGAGTTTCGCACCACCATCTGGATCTTTGTGTGCAGCGCAATCATCTAAGAGATGATGATGTCACTGACCTATTAAGGTGGTGTTTGGATCCAGGGACTTAACTTTAGTCCCTATATTTAGACACTAATTTAGAGTATTAGATATAGACTACTTACAAAACTAATTACATAAATGAAAGCTAATTCGCGAGACAAATTTTTAAGCCTAATTAATCCATAATTAGAGAATGTTTACTGTAGCATCACATAGGCTAATTATGGATTAATTAGACTCAATAGATTCGTCTCGCGAATTAGTCTAAGATTATGAATGGGTTTTATTAATAGTCTACGTTTAATATTTGTAATTAGTGTCCAAACATCCAATGTGATAAGGACTTGAAAGTTTTAGTCCCATCTAAACATGGTCTAAACTGATTGTAGCCGCACATTGAACAGATAGTAGCATTGACGTGACATATTCAAAGATGAATAGTTTATACAACTAACTCTTCGCTTC
CDS Sequence
- >LOC_Os01g48920.1
ATGAAGGCCCCCGCCGCGGCCGCGGCCGCGGTCGGCAACAGGGCTGGTGGGGTGGATCCGTCGATTCCGCGGTTCAAGTGCCAGGAGTGCCACCGCGCGCTCGTCGTCGTCGGCGTGGATTCCTTCGCCGATAAGCTCCCGGCTCAGGCCACCTCTGCGCATGCATCCTCTGTTCATGGAAGTATTATGGGAGCTAGCAGGATGGATAATTCTTATGTCGTGCTATCCAAGCAAAACAAATCTCATGGCCATGGAATTCCCCCACGCCCACCAAGTGCAGCAGCCCCACATATCGAACCTAACCAGCCAACAAGAGCGATGGAGGGTTCATATATAGTGCTTCCACCTGCTGCTGCTTCCATATACAAGACATCTACTTCTGAAGGAGGTGGTGCGCAGTTGCCACCACCAAGTATCAATTCCAGTAGTTTGTTACCAGGAAATAGTTTTCACTCTAACGTGACTGTATTAAAACGGGCATTTGAGATTGCTACGTCACAAACTCAGGTTGAGCAGCCAATGTGTCTGGACTGTATGAGGTTGCTCTCTGATAAGATGGATAAGGAGATTGAAGATGTTAATGCTGACATTAAAGCTTATGAAGTCTGTCTTCAACATTTGGAGCAGGAATCCCACACTGTCCTCAGCGATGCTGGTTTTCAGAAGGAGAAACTGAAGATTGAAGAAGAAGAAAAGAAGCTTAACGCCGCTATTGAAGAAGCTGAAAAGCAATATTCAGAAATTAGTTCTGAGATGAAGGATCTTGAAATAAAATCTAAAGAATTTGAAGAATTGGAAGAAAGGTATTGGCATGAATTCAATAGCTTTCAGTTTCAGTTGACATCTCACCAGGAAGAAAGAGATGCAATTTTGGCCAAAATAGAAGTTTCACAGGTTCATTTGGAATTGCTGAAGCAAACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGAGTAATTGGAACAATAAACAACTTCCGACTCGGACGCCTTCCTAATGTACAGGTTGAATGGGATGAGATAAATGCTGCTTGGGGTCAGGCTGCTCTTCTTTTGCATACCATGGCTCAGTACTTCACCCCAAAATTTGAGTACCGGATTAAGATTCACCCTATGGGTAGCTACCCAAGAGTCACAGATATCCACAAAAATACATATGAACTGTTTGGTCCCGTGAATTTATTCTGGAGCACACGTTTTGACAAAGCCATGACATGGTTTCTAACCTGCCTGCAAGATTTTGCTGAGTTCGCTATTAGCTTGGATAAAGAGAACAATGTACCACCTGAGAAGTCATTAAAGCTCCCATACAAGATTGATGGTGACAAGGTAGGGAGCCACACAATCTTCTTAAGTTTTAATAAAGTGGAGAACTGGACGAAAGCACTAAAATACACGCTGTGCAACTTGAAGTGGGTCCTCTACTGGTTTATCGGCAATACGAGTTTCGCACCACCATCTGGATCTTTGTGTGCAGCGCAATCATCTAAGAGATGA
Protein Sequence
- >LOC_Os01g48920.1
MKAPAAAAAAVGNRAGGVDPSIPRFKCQECHRALVVVGVDSFADKLPAQATSAHASSVHGSIMGASRMDNSYVVLSKQNKSHGHGIPPRPPSAAAPHIEPNQPTRAMEGSYIVLPPAAASIYKTSTSEGGGAQLPPPSINSSSLLPGNSFHSNVTVLKRAFEIATSQTQVEQPMCLDCMRLLSDKMDKEIEDVNADIKAYEVCLQHLEQESHTVLSDAGFQKEKLKIEEEEKKLNAAIEEAEKQYSEISSEMKDLEIKSKEFEELEERYWHEFNSFQFQLTSHQEERDAILAKIEVSQVHLELLKQTNVLNDAFYISHDGVIGTINNFRLGRLPNVQVEWDEINAAWGQAALLLHTMAQYFTPKFEYRIKIHPMGSYPRVTDIHKNTYELFGPVNLFWSTRFDKAMTWFLTCLQDFAEFAISLDKENNVPPEKSLKLPYKIDGDKVGSHTIFLSFNKVENWTKALKYTLCNLKWVLYWFIGNTSFAPPSGSLCAAQSSKR*