Gene Details:
- MSU gene ID: LOC_Os01g46926
- RAPdb gene ID: Os01g0658400
- Gene Symbol: OsUBC5a
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- SPL35 directly interacts with the E2 protein OsUBC5a and the coatomer subunit delta proteins Delta-COP1 and Delta-COP2 through the CUE domain, and down-regulation of these interacting proteins also cause development of HR-like lesions resembling those in spl35 and activation of defence responses, indicating that SPL35 may be involved in the ubiquitination and vesicular trafficking pathways.
Function-related keywords:
Literature:
- EL5, a rice N-acetylchitooligosaccharide elicitor-responsive RING-H2 finger protein, is a ubiquitin ligase which functions in vitro in co-operation with an elicitor-responsive ubiquitin-conjugating enzyme, OsUBC5b . DOI: 10.1046/j.1365-313x.2002.01299.x ; PMID: 12028574
- Disruption of gene SPL35, encoding a novel CUE domain-containing protein, leads to cell death and enhanced disease response in rice . DOI: 10.1111/pbi.13093 ; PMID: 30771255
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g46926.2
GGTGAAAGGAATAAACAAAACCAGCACGCAAACCTGTGGTAGCAAGTGGGGGGAGTTCTTTGACATATATACCCCTCCTTCCTCTTGGTTCCTTTCCCCCAACTCCATTATTGATTCTTGCAAGGAGGAAGAGCAGCTAGAGGCGAGGCAAGAAAAGAAGTGAAATCTCTCCGTTAGACAGGAAGAGGAAAAGCAAGGGGGAATTGGGGATGGCGTCAAAGAGGATACAGAAGGAGCTCAAGGATCTGCAGAAGGATCCCCCTACATCATGCAGTGCAGGTCCTGTTGGTGAAGACATGTTCCACTGGCAGGCAACGATAATGGGTCCATCTGATAGCCCATATGCTGGTGGAGTTTTCCTAGTTACCATCCACTTCCCTCCTGATTATCCCTTCAAACCACCCAAGGTGGCGTTTCGCACCAAGGTTTTCCATCCAAACATCAACAGCAACGGGAGCATTTGCCTTGACATCCTTAAGGACCAATGGAGCCCAGCACTAACCATTTCCAAGGTTTCCTTTCTCGCTTAACGCTATTTTCCTTTTGCGAGGCGGTTGCTTGGTCTCTCGCAGTTGGGCTGAACGAATCCCGCAAAAACATGTGCTCTCTGCTTGCTTTCAGGTGTTGCTGTCAATCTGTTCCCTGCTGACTGATCCGAACCCTGATGATCCTCTGGTCCCTGAGATCGCCCACATGTACAAGACAGATAGGCACAAGTACGAGAACACAGCAAGGACCTGGACTCAGAGGTACGCCATGTAGCACCTCAGATATCGATGGACATGTCGATGTTGTAACAACATTATCAACGGGTGTGTCTCCCTCTCGCCTTGTGTGGTGTAAGGATCAAAACCGGCTTTGCAGTGCACTCTTGGTGTTGCTCCATTGTGTCACTCACTCATTGCAGTGATTTCGAATAGTATCAAACTGGTGGTTTTTTTCGGTCAGATAATGTTTGCAACTTGCCAACAAGTCAGTGCTTCCAAATGCAGTGGTTCCTTGAATCTTGGCCCTCCAAGATGCAAATAACCAAGTTCATAGCTC - >LOC_Os01g46926.1
GGTGAAAGGAATAAACAAAACCAGCACGCAAACCTGTGGTAGCAAGTGGGGGGAGTTCTTTGACATATATACCCCTCCTTCCTCTTGGTTCCTTTCCCCCAACTCCATTATTGATTCTTGCAAGGAGGAAGAGCAGCTAGAGGCGAGGCAAGAAAAGAAGTGAAATCTCTCCGTTAGACAGGAAGAGGAAAAGCAAGGGGGAATTGGGGATGGCGTCAAAGAGGATACAGAAGGAGCTCAAGGATCTGCAGAAGGATCCCCCTACATCATGCAGTGCAGGTCCTGTTGGTGAAGACATGTTCCACTGGCAGGCAACGATAATGGGTCCATCTGATAGCCCATATGCTGGTGGAGTTTTCCTAGTTACCATCCACTTCCCTCCTGATTATCCCTTCAAACCACCCAAGGTGGCGTTTCGCACCAAGGTTTTCCATCCAAACATCAACAGCAACGGGAGCATTTGCCTTGACATCCTTAAGGACCAATGGAGCCCAGCACTAACCATTTCCAAGGTTTCCTTTCTCGCTTAACGCTATTTTCCTTTTGCGAGGCGGTTGCTTGGTCTCTCGCAGTTGGGCTGAACGAATCCCGCAAAAACATGTGCTCTCTGCTTGCTTTCAGGTGTTGCTGTCAATCTGTTCCCTGCTGACTGATCCGAACCCTGATGATCCTCTGGTCCCTGAGATCGCCCACATGTACAAGACAGATAGGCACAAGTACGAGAACACAGCAAGGACCTGGACTCAGAGGTACGCCATGTAGCACCTCAGATATCGATGGACATGTCGATGTTGTAACAACATTATCAACGGGTGTGTCTCCCTCTCGCCTTGTGTGGTGTAAGGATCAAAACCGGCTTTGCAGTGCACTCTTGGTGTTGCTCCATTGTGTCACTCACTCATTGCAGTGATTTCGAATAGTATCAAACTGGTGGTTTTTTTCGGTCAGATAATGTTTGCAACTTGCCAACAAGTCAGTGCTTCCAAATGCAGTGGTTCCTTGAATCTTGGCCCTCCAAGATGCAAATAACCAAGTTCATAGCTC
CDS Sequence
- >LOC_Os01g46926.2
ATGGCGTCAAAGAGGATACAGAAGGAGCTCAAGGATCTGCAGAAGGATCCCCCTACATCATGCAGTGCAGGTCCTGTTGGTGAAGACATGTTCCACTGGCAGGCAACGATAATGGGTCCATCTGATAGCCCATATGCTGGTGGAGTTTTCCTAGTTACCATCCACTTCCCTCCTGATTATCCCTTCAAACCACCCAAGGTGGCGTTTCGCACCAAGGTTTTCCATCCAAACATCAACAGCAACGGGAGCATTTGCCTTGACATCCTTAAGGACCAATGGAGCCCAGCACTAACCATTTCCAAGGTTTCCTTTCTCGCTTAA - >LOC_Os01g46926.1
ATGGCGTCAAAGAGGATACAGAAGGAGCTCAAGGATCTGCAGAAGGATCCCCCTACATCATGCAGTGCAGGTCCTGTTGGTGAAGACATGTTCCACTGGCAGGCAACGATAATGGGTCCATCTGATAGCCCATATGCTGGTGGAGTTTTCCTAGTTACCATCCACTTCCCTCCTGATTATCCCTTCAAACCACCCAAGGTGGCGTTTCGCACCAAGGTTTTCCATCCAAACATCAACAGCAACGGGAGCATTTGCCTTGACATCCTTAAGGACCAATGGAGCCCAGCACTAACCATTTCCAAGGTTTCCTTTCTCGCTTAA
Protein Sequence
- >LOC_Os01g46926.2
MASKRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKDQWSPALTISKVSFLA* - >LOC_Os01g46926.1
MASKRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKDQWSPALTISKVSFLA*