Information report for Ossbf1
Gene Details
|
|
Functional Descriptions
- One of the isolated cDNAs represented a novel protein, Ossbf1, with high homology to mammalian Na+/bile acid transporters and to sodium‐dependent transporters from bacteria.
- Expression of Ossbf1 in deep‐water rice was shown to be elevated by growth‐inducing treatments.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q5VRB2
- EMBL: AK069337, AP002910, AP008207
- AlphaFoldDB: Q5VRB2
- EnsemblPlants: Os01t0645200-02, Os01t0645200-03
- Gramene: Os01t0645200-02, Os01t0645200-03
- KEGG: dosa:Os01g0645200
- Orthologous matrix: AHYVIMP
- InterPro: IPR002657, IPR004710, IPR038770
- PANTHER: PTHR10361, PTHR10361:SF62
- Gene3D: 1.20.1530.20
- OrthoDB: Q5VRB2
- SWISS-MODEL: Q5VRB2
- eggNOG: KOG2718
Homologs
- Arabidopsis thaliana: AT2G26900
Sequences
cDNA Sequence
- >LOC_Os01g45750.1
GATTCCGTCGGAACTGAGACCGAGACGACGCCCGCACTCCTCCTGCGGGCCAGGGGTGTCAGCAGCACGGCGGCGGAGGAGCGGAGCAAGGAGGGAGGGAGCCACCTGATCCACAGGAGCGCCGCGGCCAAGCCGCCCCCGATGTGTGGCTCTCCCGGCGCACCCCGATTTCCTCGCCCCCACCTCGGTCCTCGACGCGACAACGACCAGTAGCACCGCCGCTTCTCCGCCGCTCGCTCCGACTCCGAGCCTTAAACCCTTCTGCCCCCCACTTCCGCGACCTCCGGAACTCCACCAGCAGCAGTCACGCACGTCTCTCTCTCTCGCCCCGCGTCCTCCACATGGCGGCGTCCACCACCTGCCCTGCTCGCTCCATGGCGTCCGTCTCCCGAGCCCTCCGCCCGCGGCCGCACGCCGCTATCGCCTCCGCCGCCGTCCGCACGGCTGCTCGTCTCGGGGGCGGATTGGGGATCGTTTGTTCGATGCCAAGCTATGGTAGGAAGGAGAAGGAAGAATGGGGATTGACCATTGCGTCCGCACCGGCGACCACTGCTGCTCCGGCTCTGAGAAGCTGTCAACTATTGTGCAAGGCTGAAGCTAACATATCCAGTAATCTGCCAGAGAGCATTCCTAGTGAAGCAAACCAGTACGAGAAAATAGTTGAGCTGCTTACCACTCTTTTCCCTGTCTGGGTCATATTAGGTACCATTATTGGCATCTACAAGCCATCGATGGTTACCTGGTTGGAGACTGATCTTTTCACTGTGGGCCTAGGATTCCTAATGCTATCAATGGGACTAACATTGACCTTCGAAGATTTCAGGAGATGCATGAGGAATCCATGGACTGTGGGTGTGGGATTTCTTGCGCAGTATTTGATCAAACCTATGCTGGGATTTGCTATTGCCATGACCTTGAAGTTATCTGCTCCTCTTGCAACTGGTCTTATTTTAGTGTCATGTTGCCCTGGTGGACAAGCATCAAATGTTGCTACTTATATATCCAAAGGAAATGTCGCACTTTCAGTTCTTATGACAACTTGTTCGACTATTGGTGCTATAGTGATGACACCACTCCTTACTAAACTCCTAGCTGGTCAACTGGTTCCTGTCGATGCTGCAGGATTGGCCATCAGTACTTTTCAGGTTGTTTTACTGCCAACTATTGTCGGAGTCTTGGCGCATGAGTATTTTCCTAAGTTTACTGAGCGCATTATATCCATAACACCATTGATTGGGGTTCTCCTCACCACTTTGCTTTGTGCTAGTCCTATCGGACAAGTCTCAGAGGTGTTGAAAGCTCAAGGTGGTCAACTTATAATTCCCGTTGCTCTGCTGCATGTTGCTGCCTTTGCACTTGGGTATTGGTTATCAAAAGTTTCCTCTTTTGGGGAATCAACTTCTAGGACTATCTCTATTGAATGCGGGATGCAGAGTTCTGCACTTGGATTTTTACTTGCCCAAAAGCACTTCACGAATCCACTCGTAGCTGTTCCATCTGCTGTCAGTGTTGTATGCATGGCGCTTGGAGGGAGTGCTCTTGCAGTTTTTTGGAGGAACAGAGGGCTTCCAGCAAATGACAAAGACGATTTCAAGGAATGAAACACCAACACCCTCCAGTTTCTAGTCATTACCTAGTGTTGTTTTTTAGTTCAGTGGAGTTATCACAGCATTTTTCTTGTTACCCATATTTTAGCAAGTTGATTATCAGTAGGACTTGCCTACTTGGTAGGTCTGTTGTATTGCACTCTTATCTTCCAAATAAGCTGCAGGTGCTTCTCTGCAAAGCACTCAATTTATAGTCCGTTGCCAAGTGAATGCATTGTAATATTATGCGCGGTGAGTAAATAGATTTCCAAGAATTGCTATTCCAATCTATTGAAAGGTCAATAAGCTTTGTATGTATTCTTGCTGAATGCAGTTTTTCCTTTAAGAAAATGGGAAAAGAGTGAAGTTCACCATCAGTCCTTAAA
CDS Sequence
- >LOC_Os01g45750.1
ATGGCGGCGTCCACCACCTGCCCTGCTCGCTCCATGGCGTCCGTCTCCCGAGCCCTCCGCCCGCGGCCGCACGCCGCTATCGCCTCCGCCGCCGTCCGCACGGCTGCTCGTCTCGGGGGCGGATTGGGGATCGTTTGTTCGATGCCAAGCTATGGTAGGAAGGAGAAGGAAGAATGGGGATTGACCATTGCGTCCGCACCGGCGACCACTGCTGCTCCGGCTCTGAGAAGCTGTCAACTATTGTGCAAGGCTGAAGCTAACATATCCAGTAATCTGCCAGAGAGCATTCCTAGTGAAGCAAACCAGTACGAGAAAATAGTTGAGCTGCTTACCACTCTTTTCCCTGTCTGGGTCATATTAGGTACCATTATTGGCATCTACAAGCCATCGATGGTTACCTGGTTGGAGACTGATCTTTTCACTGTGGGCCTAGGATTCCTAATGCTATCAATGGGACTAACATTGACCTTCGAAGATTTCAGGAGATGCATGAGGAATCCATGGACTGTGGGTGTGGGATTTCTTGCGCAGTATTTGATCAAACCTATGCTGGGATTTGCTATTGCCATGACCTTGAAGTTATCTGCTCCTCTTGCAACTGGTCTTATTTTAGTGTCATGTTGCCCTGGTGGACAAGCATCAAATGTTGCTACTTATATATCCAAAGGAAATGTCGCACTTTCAGTTCTTATGACAACTTGTTCGACTATTGGTGCTATAGTGATGACACCACTCCTTACTAAACTCCTAGCTGGTCAACTGGTTCCTGTCGATGCTGCAGGATTGGCCATCAGTACTTTTCAGGTTGTTTTACTGCCAACTATTGTCGGAGTCTTGGCGCATGAGTATTTTCCTAAGTTTACTGAGCGCATTATATCCATAACACCATTGATTGGGGTTCTCCTCACCACTTTGCTTTGTGCTAGTCCTATCGGACAAGTCTCAGAGGTGTTGAAAGCTCAAGGTGGTCAACTTATAATTCCCGTTGCTCTGCTGCATGTTGCTGCCTTTGCACTTGGGTATTGGTTATCAAAAGTTTCCTCTTTTGGGGAATCAACTTCTAGGACTATCTCTATTGAATGCGGGATGCAGAGTTCTGCACTTGGATTTTTACTTGCCCAAAAGCACTTCACGAATCCACTCGTAGCTGTTCCATCTGCTGTCAGTGTTGTATGCATGGCGCTTGGAGGGAGTGCTCTTGCAGTTTTTTGGAGGAACAGAGGGCTTCCAGCAAATGACAAAGACGATTTCAAGGAATGA
Protein Sequence
- >LOC_Os01g45750.1
MAASTTCPARSMASVSRALRPRPHAAIASAAVRTAARLGGGLGIVCSMPSYGRKEKEEWGLTIASAPATTAAPALRSCQLLCKAEANISSNLPESIPSEANQYEKIVELLTTLFPVWVILGTIIGIYKPSMVTWLETDLFTVGLGFLMLSMGLTLTFEDFRRCMRNPWTVGVGFLAQYLIKPMLGFAIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLLPTIVGVLAHEYFPKFTERIISITPLIGVLLTTLLCASPIGQVSEVLKAQGGQLIIPVALLHVAAFALGYWLSKVSSFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSALAVFWRNRGLPANDKDDFKE*