Gene Details:
- MSU gene ID: LOC_Os01g45750
- RAPdb gene ID: Os01g0645200
- Gene Symbol: Ossbf1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- One of the isolated cDNAs represented a novel protein, Ossbf1, with high homology to mammalian Na+/bile acid transporters and to sodium‐dependent transporters from bacteria.
- Expression of Ossbf1 in deep‐water rice was shown to be elevated by growth‐inducing treatments.
Function-related keywords:
Literature:
- The novel rice (Oryza sativa L.) gene OsSbf1 encodes a putative member of the Na+/bile acid symporter family . DOI: 10.1093/jxb/erf053 ; PMID: 12177140
Related News:
Gene Resources:
- NCBI ID: AF498303
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os01g45750.1
GATTCCGTCGGAACTGAGACCGAGACGACGCCCGCACTCCTCCTGCGGGCCAGGGGTGTCAGCAGCACGGCGGCGGAGGAGCGGAGCAAGGAGGGAGGGAGCCACCTGATCCACAGGAGCGCCGCGGCCAAGCCGCCCCCGATGTGTGGCTCTCCCGGCGCACCCCGATTTCCTCGCCCCCACCTCGGTCCTCGACGCGACAACGACCAGTAGCACCGCCGCTTCTCCGCCGCTCGCTCCGACTCCGAGCCTTAAACCCTTCTGCCCCCCACTTCCGCGACCTCCGGAACTCCACCAGCAGCAGTCACGCACGTCTCTCTCTCTCGCCCCGCGTCCTCCACATGGCGGCGTCCACCACCTGCCCTGCTCGCTCCATGGCGTCCGTCTCCCGAGCCCTCCGCCCGCGGCCGCACGCCGCTATCGCCTCCGCCGCCGTCCGCACGGCTGCTCGTCTCGGGGGCGGATTGGGGATCGTTTGTTCGATGCCAAGCTATGGTAGGAAGGAGAAGGAAGAATGGGGATTGACCATTGCGTCCGCACCGGCGACCACTGCTGCTCCGGCTCTGAGAAGCTGTCAACTATTGTGCAAGGCTGAAGCTAACATATCCAGTAATCTGCCAGAGAGCATTCCTAGTGAAGCAAACCAGTACGAGAAAATAGTTGAGCTGCTTACCACTCTTTTCCCTGTCTGGGTCATATTAGGTACCATTATTGGCATCTACAAGCCATCGATGGTTACCTGGTTGGAGACTGATCTTTTCACTGTGGGCCTAGGATTCCTAATGCTATCAATGGGACTAACATTGACCTTCGAAGATTTCAGGAGATGCATGAGGAATCCATGGACTGTGGGTGTGGGATTTCTTGCGCAGTATTTGATCAAACCTATGCTGGGATTTGCTATTGCCATGACCTTGAAGTTATCTGCTCCTCTTGCAACTGGTCTTATTTTAGTGTCATGTTGCCCTGGTGGACAAGCATCAAATGTTGCTACTTATATATCCAAAGGAAATGTCGCACTTTCAGTTCTTATGACAACTTGTTCGACTATTGGTGCTATAGTGATGACACCACTCCTTACTAAACTCCTAGCTGGTCAACTGGTTCCTGTCGATGCTGCAGGATTGGCCATCAGTACTTTTCAGGTTGTTTTACTGCCAACTATTGTCGGAGTCTTGGCGCATGAGTATTTTCCTAAGTTTACTGAGCGCATTATATCCATAACACCATTGATTGGGGTTCTCCTCACCACTTTGCTTTGTGCTAGTCCTATCGGACAAGTCTCAGAGGTGTTGAAAGCTCAAGGTGGTCAACTTATAATTCCCGTTGCTCTGCTGCATGTTGCTGCCTTTGCACTTGGGTATTGGTTATCAAAAGTTTCCTCTTTTGGGGAATCAACTTCTAGGACTATCTCTATTGAATGCGGGATGCAGAGTTCTGCACTTGGATTTTTACTTGCCCAAAAGCACTTCACGAATCCACTCGTAGCTGTTCCATCTGCTGTCAGTGTTGTATGCATGGCGCTTGGAGGGAGTGCTCTTGCAGTTTTTTGGAGGAACAGAGGGCTTCCAGCAAATGACAAAGACGATTTCAAGGAATGAAACACCAACACCCTCCAGTTTCTAGTCATTACCTAGTGTTGTTTTTTAGTTCAGTGGAGTTATCACAGCATTTTTCTTGTTACCCATATTTTAGCAAGTTGATTATCAGTAGGACTTGCCTACTTGGTAGGTCTGTTGTATTGCACTCTTATCTTCCAAATAAGCTGCAGGTGCTTCTCTGCAAAGCACTCAATTTATAGTCCGTTGCCAAGTGAATGCATTGTAATATTATGCGCGGTGAGTAAATAGATTTCCAAGAATTGCTATTCCAATCTATTGAAAGGTCAATAAGCTTTGTATGTATTCTTGCTGAATGCAGTTTTTCCTTTAAGAAAATGGGAAAAGAGTGAAGTTCACCATCAGTCCTTAAA
CDS Sequence
- >LOC_Os01g45750.1
ATGGCGGCGTCCACCACCTGCCCTGCTCGCTCCATGGCGTCCGTCTCCCGAGCCCTCCGCCCGCGGCCGCACGCCGCTATCGCCTCCGCCGCCGTCCGCACGGCTGCTCGTCTCGGGGGCGGATTGGGGATCGTTTGTTCGATGCCAAGCTATGGTAGGAAGGAGAAGGAAGAATGGGGATTGACCATTGCGTCCGCACCGGCGACCACTGCTGCTCCGGCTCTGAGAAGCTGTCAACTATTGTGCAAGGCTGAAGCTAACATATCCAGTAATCTGCCAGAGAGCATTCCTAGTGAAGCAAACCAGTACGAGAAAATAGTTGAGCTGCTTACCACTCTTTTCCCTGTCTGGGTCATATTAGGTACCATTATTGGCATCTACAAGCCATCGATGGTTACCTGGTTGGAGACTGATCTTTTCACTGTGGGCCTAGGATTCCTAATGCTATCAATGGGACTAACATTGACCTTCGAAGATTTCAGGAGATGCATGAGGAATCCATGGACTGTGGGTGTGGGATTTCTTGCGCAGTATTTGATCAAACCTATGCTGGGATTTGCTATTGCCATGACCTTGAAGTTATCTGCTCCTCTTGCAACTGGTCTTATTTTAGTGTCATGTTGCCCTGGTGGACAAGCATCAAATGTTGCTACTTATATATCCAAAGGAAATGTCGCACTTTCAGTTCTTATGACAACTTGTTCGACTATTGGTGCTATAGTGATGACACCACTCCTTACTAAACTCCTAGCTGGTCAACTGGTTCCTGTCGATGCTGCAGGATTGGCCATCAGTACTTTTCAGGTTGTTTTACTGCCAACTATTGTCGGAGTCTTGGCGCATGAGTATTTTCCTAAGTTTACTGAGCGCATTATATCCATAACACCATTGATTGGGGTTCTCCTCACCACTTTGCTTTGTGCTAGTCCTATCGGACAAGTCTCAGAGGTGTTGAAAGCTCAAGGTGGTCAACTTATAATTCCCGTTGCTCTGCTGCATGTTGCTGCCTTTGCACTTGGGTATTGGTTATCAAAAGTTTCCTCTTTTGGGGAATCAACTTCTAGGACTATCTCTATTGAATGCGGGATGCAGAGTTCTGCACTTGGATTTTTACTTGCCCAAAAGCACTTCACGAATCCACTCGTAGCTGTTCCATCTGCTGTCAGTGTTGTATGCATGGCGCTTGGAGGGAGTGCTCTTGCAGTTTTTTGGAGGAACAGAGGGCTTCCAGCAAATGACAAAGACGATTTCAAGGAATGA
Protein Sequence
- >LOC_Os01g45750.1
MAASTTCPARSMASVSRALRPRPHAAIASAAVRTAARLGGGLGIVCSMPSYGRKEKEEWGLTIASAPATTAAPALRSCQLLCKAEANISSNLPESIPSEANQYEKIVELLTTLFPVWVILGTIIGIYKPSMVTWLETDLFTVGLGFLMLSMGLTLTFEDFRRCMRNPWTVGVGFLAQYLIKPMLGFAIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLLPTIVGVLAHEYFPKFTERIISITPLIGVLLTTLLCASPIGQVSEVLKAQGGQLIIPVALLHVAAFALGYWLSKVSSFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSALAVFWRNRGLPANDKDDFKE*