Gene Details:
- MSU gene ID: LOC_Os01g45200
- RAPdb gene ID: Os01g0639200
- Gene Symbol: Snl6
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- We show that Snl6 is required for NH1-mediated resistance to Xoo.
- While both lines are susceptible to inoculation with Xoo, Snl6-RGT plants developed longer lesions suggesting that Snl6 contributes to resistance in Nipponbare.
Function-related keywords:
Literature:
- Rice Snl6, a cinnamoyl-CoA reductase-like gene family member, is required for NH1-mediated immunity to Xanthomonas oryzae pv. oryzae . DOI: 10.1371/journal.pgen.1001123 ; PMID: 20862311
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g45200.1
ATGCGGGCGGCGCTGCTGCATGGCCACGGGGGCGGGGCGGCGGCGGCGGCGGCGGCCGGGTGGCGCCCCTCGGCCGGCGACGCGGACGTCAAGCGCACCGCGGGCGGCGACGGGGGCGCGGCGGGGCCGCGCACCGTCTGCGTCACGGGCGGCATCTCCTTCGTCGGGTTCGCCGTCGTCGACCGCCTGCTCCGGCACGGCTACACCGTGCGCCTCGCCCTCGAGACCCAAGAGGACCTGGACAAGCTGAGGGAGATGGAGATGTTCGGCGAGGACGGCCGGGACGGCGTGTGGACGGTGATGGCGAACGTGACGGACCCCGAGAGCCTGCACCGGGCGTTCGACGGATGCGCCGGCGTGTTTCACACCTCGGCGTTCGTGGATCCGGGGGGCATGTCCGGCTACACGAAACATATGGCAAGCTTGGAGGCGAAAGCAGCAGAGCAGGTGATCGAGGCGTGCGTGAGGACAGAGTCCGTCAGAAAATGCGTCTTCACGTCGTCGTTGCTAGCATGTGTATGGAGGCAAAATTACCCTCATGACCGACGGTTTCCTACCATCATCGACGAGAACTGCTGGAGCGATGAGAGCTTCTGCCGTGACAACAAGCTGTGGTTTGCACTGGGCAAGACGGCAGCGGAGAAGACGGCGTGGAGGGCAGCCAGGGGTAGGGACCTGAAGCTGGTCACCGTCTGCCCGGCGCTGGTCACCGGTCCGGGATTCCGCCGCCGCAACTCCACCGCCTCCATCGCCTACCTCAAAGGGGCTCGCGCCATGCTCGCCGACGGCCTGCTCGCGACGGCGAGCGTGGAGACGGTGGCGGAGGCGCACGTCCGGGTGTACGAGGCGATGGGCGACAACACGGCCGGCGGGAGGTACATCTGCTACGACCACGTGGTGAAGAGGCCCGAGGAGTTCGCGGAGCTGGAGCGCCAGCTGGGGATCCCGCGCAGAGCGGCGGCGGCGGCGGCCGCGCAGGACTCCGGCGACCGGCCGGCGAGGTTCGATCTGTGCAGGCAGAAGCTGGCGAGGCTCATGTCCACCCGAAGGCGGTGCACGTACGACGACTACTACTCCGTCGCATTCGACTAGATATCTAGCTAGGCTAGGCAAACTGGCGAGCACCACCGTGCAATGGCTTGCAGCACTGCACCAATGATGGATCATCTGGGTTGGGTTTTGCCTGAAGGGTGCAAGAGGACGAAGTCGTAGTGGATGGATGGAAGAAGAGTGTGTGACATCATGTACATAGTGCGATCTTGTAGGCTGTTTGATGCATCAATAAAGCTTGATCGAGCCCCATTTTTTGGCTA
CDS Sequence
- >LOC_Os01g45200.1
ATGCGGGCGGCGCTGCTGCATGGCCACGGGGGCGGGGCGGCGGCGGCGGCGGCGGCCGGGTGGCGCCCCTCGGCCGGCGACGCGGACGTCAAGCGCACCGCGGGCGGCGACGGGGGCGCGGCGGGGCCGCGCACCGTCTGCGTCACGGGCGGCATCTCCTTCGTCGGGTTCGCCGTCGTCGACCGCCTGCTCCGGCACGGCTACACCGTGCGCCTCGCCCTCGAGACCCAAGAGGACCTGGACAAGCTGAGGGAGATGGAGATGTTCGGCGAGGACGGCCGGGACGGCGTGTGGACGGTGATGGCGAACGTGACGGACCCCGAGAGCCTGCACCGGGCGTTCGACGGATGCGCCGGCGTGTTTCACACCTCGGCGTTCGTGGATCCGGGGGGCATGTCCGGCTACACGAAACATATGGCAAGCTTGGAGGCGAAAGCAGCAGAGCAGGTGATCGAGGCGTGCGTGAGGACAGAGTCCGTCAGAAAATGCGTCTTCACGTCGTCGTTGCTAGCATGTGTATGGAGGCAAAATTACCCTCATGACCGACGGTTTCCTACCATCATCGACGAGAACTGCTGGAGCGATGAGAGCTTCTGCCGTGACAACAAGCTGTGGTTTGCACTGGGCAAGACGGCAGCGGAGAAGACGGCGTGGAGGGCAGCCAGGGGTAGGGACCTGAAGCTGGTCACCGTCTGCCCGGCGCTGGTCACCGGTCCGGGATTCCGCCGCCGCAACTCCACCGCCTCCATCGCCTACCTCAAAGGGGCTCGCGCCATGCTCGCCGACGGCCTGCTCGCGACGGCGAGCGTGGAGACGGTGGCGGAGGCGCACGTCCGGGTGTACGAGGCGATGGGCGACAACACGGCCGGCGGGAGGTACATCTGCTACGACCACGTGGTGAAGAGGCCCGAGGAGTTCGCGGAGCTGGAGCGCCAGCTGGGGATCCCGCGCAGAGCGGCGGCGGCGGCGGCCGCGCAGGACTCCGGCGACCGGCCGGCGAGGTTCGATCTGTGCAGGCAGAAGCTGGCGAGGCTCATGTCCACCCGAAGGCGGTGCACGTACGACGACTACTACTCCGTCGCATTCGACTAG
Protein Sequence
- >LOC_Os01g45200.1
MRAALLHGHGGGAAAAAAAGWRPSAGDADVKRTAGGDGGAAGPRTVCVTGGISFVGFAVVDRLLRHGYTVRLALETQEDLDKLREMEMFGEDGRDGVWTVMANVTDPESLHRAFDGCAGVFHTSAFVDPGGMSGYTKHMASLEAKAAEQVIEACVRTESVRKCVFTSSLLACVWRQNYPHDRRFPTIIDENCWSDESFCRDNKLWFALGKTAAEKTAWRAARGRDLKLVTVCPALVTGPGFRRRNSTASIAYLKGARAMLADGLLATASVETVAEAHVRVYEAMGDNTAGGRYICYDHVVKRPEEFAELERQLGIPRRAAAAAAAQDSGDRPARFDLCRQKLARLMSTRRRCTYDDYYSVAFD*