Gene Details:
- MSU gene ID: LOC_Os01g42520
- RAPdb gene ID: Os01g0611000
- Gene Symbol: DFOT1 EMF1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Importantly, a knockout of DFOT1 showed earlier diurnal flower opening.
- DFOT1 is specifically expressed in the lodicules, and its expression gradually increases with the approach to flowering but decreases with flowering.
Function-related keywords:
Literature:
- Methylesterification of cell-wall pectin controls the diurnal flower-opening times in rice . DOI: 10.1016/j.molp.2022.04.004 ; PMID: 35418344
- EARLY MORNING FLOWERING1 (EMF1) regulates the floret opening time by mediating lodicule cell wall formation in rice . DOI: 10.1111/pbi.13860 ; PMID: 35634733
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g42520.1
ATCATCCCAAGCGGCACAGCAGCCTCGAGCTGAACTGAAGCAGGGGAGGGGAGGAGAGGAGAGGAGAGAGCAACGCGTTCACCGTTGAGAGAAGAGAAGGAAGTAAGACGAGCGCAATGCGTCGCGTCACGGTGCTCGTTCTGCTCCTCGCCTGCGCGGCGGCGCGCGCCGCCGCCGCCGTCGTCACCGACGGGCTGTTGCCGAACGGCAACTTCGAGGAGGGCCCACCCAAGTCGGACCTGGTGAACGGCACGGTGGTGCGCGGCGCGAACGCCATCCCGCGGTGGGAGACGTCCGGGTTCGTGGAGTACATCGAGTCCGGGCACAAGCAGGGGGACATGCTGCTGGTGGTGCCGCAGGGCGCGCACGCCGTGCGCCTCGGCAACGAGGCGTCCATCCGGCAGCGGCTCGCCGTGACCAGGGGCGCCTACTACGCCGTCACGTTTAGCGCGGCGCGCACCTGCGCCCAGGCGGAGCAGCTCAACGTGTCGGTGAGCCCCGAGTGGGGGGTGCTCCCCATGCAGACCATCTACGGCAGCAACGGGTGGGACTCGTACGCGTGGGCGTTCAAGGCGAAGATGGACGAGGTGGCGCTCGTCATCCACAACCCGGGCGTGGAGGAGGACCCGGCGTGCGGCCCGCTCATCGACGGCGTCGCCATCAGGGCGCTGTACCCGCCGACGCTGGCCAAGGGGAACATGCTCAAGAACGGCGGGTTCGAGGAGGGCCCCTACTTCCTCCCCAACGCGTCGTGGGGGGTGCTCGTCCCGCCCAACATCGAGGACGACCACTCGCCGCTCCCGGCGTGGATGATCATGTCGTCCAAGGCCGTCAAGTACGTCGACGCCGCGCACTTCGCCGTGCCGCAGGGCGCCCGCGCCGTGGAGCTGGTGGGGGGCAAGGAGTCGGCGCTGGTGCAGGAGGTGCGCACCGTGCCCGGGTGGACGTACCGCCTGTCGTTCGCCGTGGGCGACGCGCGCGACGGGTGCGCGGGCTCCATGGTCGCCGAGGCGTACGCGGCGAGGGCCTCCATCAAGGTGCCGTACGAGTCCAAGGGCACCGGCGGGTACAAGCGCGCCGTCCTCGAGTTCGCCGCCATCGCCAACCGCACCCGCGTCGTGTTCCAGAGCACGTTCTACCACACCATGACCGACGGCTCGCTCTGCGGGCCGGTCATCGACGACGCCTCCCTCGTCGGCCTCCGCAAGAAGACGGCCGGCCGGCGGCTGCTCCTGTAAGACGAACGGCCGCGTGGCATCGAACGCCGTCGCATTCCCTCCATTCTATGAATATATGAATACAAGGCGCGGTTAAACTTGGGGGCAGTTGGCACGACCAAAGTTGGGTGCTAAAATGGGTAGTATTGCTAGGCTCGTTTTTTTGGTTTTGGTGTGTACTCTGGTATATGTACGCGTGTGCGCGCGTTGCATGGTTATACTTTGGAGCTGCGCTCGTTTGGTGTTTTGTTGTGAAGAGGAGAGGTGATACGTGGTGCAAGGTCTGTCACAAGGGGTTTGGTTGATCAACTTAACCGGAGGTGCCAACCTAAACGCACCATCAGACATTATGAATGGGAAGCATTACTAGTGCTCACTTTTTTATAAGTCAATTGTGTATTTTTAATTCTGTTCTAAAAAGCCAGATCCTTTTTGAAAGTTGAGTCATACATTTGAGCTATGCTCGAAAATCAATCGGAAACGAACTTAAACATGTGTAAATGATGTATGAAAGTAAGAGTAAGTTTTATATTTAGCCACATTTTCTTATTAGAAAAGTTTTAATTTGGATCGCTTGTTTAGCTATACTTTTACTTCGGACCAGATAACATTTTCTTTGTTTGCATCTTGGACCACCTTCACTATACATCTATTTCATCCCC
CDS Sequence
- >LOC_Os01g42520.1
ATGCGTCGCGTCACGGTGCTCGTTCTGCTCCTCGCCTGCGCGGCGGCGCGCGCCGCCGCCGCCGTCGTCACCGACGGGCTGTTGCCGAACGGCAACTTCGAGGAGGGCCCACCCAAGTCGGACCTGGTGAACGGCACGGTGGTGCGCGGCGCGAACGCCATCCCGCGGTGGGAGACGTCCGGGTTCGTGGAGTACATCGAGTCCGGGCACAAGCAGGGGGACATGCTGCTGGTGGTGCCGCAGGGCGCGCACGCCGTGCGCCTCGGCAACGAGGCGTCCATCCGGCAGCGGCTCGCCGTGACCAGGGGCGCCTACTACGCCGTCACGTTTAGCGCGGCGCGCACCTGCGCCCAGGCGGAGCAGCTCAACGTGTCGGTGAGCCCCGAGTGGGGGGTGCTCCCCATGCAGACCATCTACGGCAGCAACGGGTGGGACTCGTACGCGTGGGCGTTCAAGGCGAAGATGGACGAGGTGGCGCTCGTCATCCACAACCCGGGCGTGGAGGAGGACCCGGCGTGCGGCCCGCTCATCGACGGCGTCGCCATCAGGGCGCTGTACCCGCCGACGCTGGCCAAGGGGAACATGCTCAAGAACGGCGGGTTCGAGGAGGGCCCCTACTTCCTCCCCAACGCGTCGTGGGGGGTGCTCGTCCCGCCCAACATCGAGGACGACCACTCGCCGCTCCCGGCGTGGATGATCATGTCGTCCAAGGCCGTCAAGTACGTCGACGCCGCGCACTTCGCCGTGCCGCAGGGCGCCCGCGCCGTGGAGCTGGTGGGGGGCAAGGAGTCGGCGCTGGTGCAGGAGGTGCGCACCGTGCCCGGGTGGACGTACCGCCTGTCGTTCGCCGTGGGCGACGCGCGCGACGGGTGCGCGGGCTCCATGGTCGCCGAGGCGTACGCGGCGAGGGCCTCCATCAAGGTGCCGTACGAGTCCAAGGGCACCGGCGGGTACAAGCGCGCCGTCCTCGAGTTCGCCGCCATCGCCAACCGCACCCGCGTCGTGTTCCAGAGCACGTTCTACCACACCATGACCGACGGCTCGCTCTGCGGGCCGGTCATCGACGACGCCTCCCTCGTCGGCCTCCGCAAGAAGACGGCCGGCCGGCGGCTGCTCCTGTAA
Protein Sequence
- >LOC_Os01g42520.1
MRRVTVLVLLLACAAARAAAAVVTDGLLPNGNFEEGPPKSDLVNGTVVRGANAIPRWETSGFVEYIESGHKQGDMLLVVPQGAHAVRLGNEASIRQRLAVTRGAYYAVTFSAARTCAQAEQLNVSVSPEWGVLPMQTIYGSNGWDSYAWAFKAKMDEVALVIHNPGVEEDPACGPLIDGVAIRALYPPTLAKGNMLKNGGFEEGPYFLPNASWGVLVPPNIEDDHSPLPAWMIMSSKAVKYVDAAHFAVPQGARAVELVGGKESALVQEVRTVPGWTYRLSFAVGDARDGCAGSMVAEAYAARASIKVPYESKGTGGYKRAVLEFAAIANRTRVVFQSTFYHTMTDGSLCGPVIDDASLVGLRKKTAGRRLLL*