Information report for SaF
Gene Details
|
|
Functional Descriptions
- Here we show that a locus for indica-japonica hybrid male sterility, Sa, comprises two adjacent genes, SaM and SaF, encoding a small ubiquitin-like modifier E3 ligase-like protein and an F-box protein, respectively.
- This allele-specific gamete elimination results from a selective interaction of SaF(+) with SaM(-), a truncated protein, but not with SaM(+) because of the presence of an inhibitory domain, although SaM(+) is required for this male sterility.
- The complex locus Sa comprises two adjacently located genes, SaF and SaM, which interact to cause abortion of pollen grains carrying the japonica allele in japonica-indica hybrids.
- Our results firmly proved that SaF and SaM are required for the hybrid male sterility, but are not essential for pollen development.
- Here we showed that silencing of SaF or SaM by RNA interference restored male fertility in indica-japonica hybrids with heterozygous Sa.
Functional Keywords
- sterility , pollen , development , fertility , pollen-development , male-sterility , sa , SA
Literature and News
Gene Resources
- UniProt: Q9AWX3
- EMBL: AP014957, EU337974
- AlphaFoldDB: Q9AWX3
- EnsemblPlants: Os01t0578500-01
- Gramene: Os01t0578500-01
- KEGG: osa:9266343
- InterPro: IPR001810, IPR006566, IPR036047
- PANTHER: PTHR32141, PTHR32141:SF40
- SUPFAM: SSF81383
- PROSITE: PS50181
- Gene3D: 1.20.1280.50
- OrthoDB: Q9AWX3
- Conserved Domain Database: cd22160
- eggNOG: ENOG502R3XN
Sequences
cDNA Sequence
- >LOC_Os01g39670.1
ATGGAGGCGGTCATCGCGGAGTGCCGCCCCAAGCCTCTCTTCACCACCGGGCCCTTCCTCTCCGCCGTCGGCGGCGGCGGCGGCGGCGTCGACCGCATCTCCGGGCTCCCCGACGACCTCCTCTTTGTCATCCTCTCCAAGCTCCCCGTCAGGGATGCCGTGGCGACGTCCGCCCTCTCCCCCCGCTGGAAGAGCCTCTGGTCCAGCGTCCCGCTCCGCCTCGACGACGCCGGCCTCCTCCACCGCCGCGACGGCACGCGCCTCGGCCGGGAAGGCGTCGCCGCCACCGTCTCCGCCGTCCTCGCCGCCCACCCAGGCCCCGTGCCCGCGGCCTCCGTTGGGTGCTGCCTCTCCTCCGACGACCAGGGCTACCAGCTGGGAGGCTGGCTCCGAGCCCTCGCCGCCAAGGGCGTTCGGCAACTGTGCCTGATGGGCGCGCCATGGTCGCCGCGCGCTGCTCTCCCCTCCGCTGTGTTCTCCTGCTCATCCCTGCGGCGCCTCTTCCTTGGTTCCGTGCAATGCAACTGGGACCTCATACCAGACCATGCCTGCTTCCCTGAGCTACGAGAGATCCAGATATGCAACGCCCTAATGAAGAGCCAGGATCTGTCCCTTGTTTTGGCTGTCTGCCCAGCGCTTGAGACAGTGGAGATTCTTGCGAGCCGTAACAAAATCCCCACCGTGCGAATGAGTAGCCATACTATCCGCAATACTTTGCTATGGAAGTCGGTGGCCAAGGAAGTGAACGTTTTGGACACCCCTTGCCTCAGCAGGGTTGTTTTGTGGCAGGATCTTCTGCTGCCCCACTCAAGATATAATTCTAAGGTCACAATCAGCCGTGCCACCAAAATGCGCATTTCCGGTTACCTGGACACCGGCATCAACACTTTGGTGATCAACGAAACCACAGTTAAGGTAAACACAAATATAAGCTTCAAGACACTTATCCCCAGCGTGAAGGTTTTGGGTCTCTCTGTTCATTTCGGAGTACGAAAGGAGGCTTTGATGTCCATCAGCTTCCTTAGGTGTTTTCCAGAGGTTGAGACACTACATATAACTAGCAAAACGGACAAGGCTTCAGAAGCCGAACAATTCAGTTTCTGGGGAAAGGTTGATCCTGTTGAGTGTGTGACCTCTCATCTCAAGAAGTTAGTGTTCCATGGGATGCCATGGTGTCCTGGAAACCTTGAGTTTCTCAAATTCATCGTGGAAGGGGCATACTTGCTAGAGAAGGTGTTGATTGTTCTTCCTAAAGGAACTTACACTAGCATGCATAGCGTTATCACCAAACTCAAGTTAGCACCTTTGACCTCTGCAAGTTGGGCTAGTCACATCTGTAAAATGGAGGTTGTCCAATCCAGTCAAGGAACTTTGAGCTACCAAAGGGCATCTGATCATTCCGTCGATGATCCTTTAGATTATTCCCTGTAGGCTGTTCTATCTGTTTGTTGTGATTATAACATATTGTCGATATGGTTATCCTTTAGGTCCTTCATGTCTGTATGCCATTTTCATGTGTTTTGGCTTGTTATCTAGAGAAAAATGTATGGTTTGTTGGATATGCTTAGTACTATACTTGATGGGGTGCAAGTAATAGAATGCAGAGCATCCGATGTGTCAGTAGTTCCTCTCCATTACTTCTTGTGGCAAGACAGCAAGATACTCTACTCTCGATTTTGTTGCC
CDS Sequence
- >LOC_Os01g39670.1
ATGGAGGCGGTCATCGCGGAGTGCCGCCCCAAGCCTCTCTTCACCACCGGGCCCTTCCTCTCCGCCGTCGGCGGCGGCGGCGGCGGCGTCGACCGCATCTCCGGGCTCCCCGACGACCTCCTCTTTGTCATCCTCTCCAAGCTCCCCGTCAGGGATGCCGTGGCGACGTCCGCCCTCTCCCCCCGCTGGAAGAGCCTCTGGTCCAGCGTCCCGCTCCGCCTCGACGACGCCGGCCTCCTCCACCGCCGCGACGGCACGCGCCTCGGCCGGGAAGGCGTCGCCGCCACCGTCTCCGCCGTCCTCGCCGCCCACCCAGGCCCCGTGCCCGCGGCCTCCGTTGGGTGCTGCCTCTCCTCCGACGACCAGGGCTACCAGCTGGGAGGCTGGCTCCGAGCCCTCGCCGCCAAGGGCGTTCGGCAACTGTGCCTGATGGGCGCGCCATGGTCGCCGCGCGCTGCTCTCCCCTCCGCTGTGTTCTCCTGCTCATCCCTGCGGCGCCTCTTCCTTGGTTCCGTGCAATGCAACTGGGACCTCATACCAGACCATGCCTGCTTCCCTGAGCTACGAGAGATCCAGATATGCAACGCCCTAATGAAGAGCCAGGATCTGTCCCTTGTTTTGGCTGTCTGCCCAGCGCTTGAGACAGTGGAGATTCTTGCGAGCCGTAACAAAATCCCCACCGTGCGAATGAGTAGCCATACTATCCGCAATACTTTGCTATGGAAGTCGGTGGCCAAGGAAGTGAACGTTTTGGACACCCCTTGCCTCAGCAGGGTTGTTTTGTGGCAGGATCTTCTGCTGCCCCACTCAAGATATAATTCTAAGGTCACAATCAGCCGTGCCACCAAAATGCGCATTTCCGGTTACCTGGACACCGGCATCAACACTTTGGTGATCAACGAAACCACAGTTAAGGTAAACACAAATATAAGCTTCAAGACACTTATCCCCAGCGTGAAGGTTTTGGGTCTCTCTGTTCATTTCGGAGTACGAAAGGAGGCTTTGATGTCCATCAGCTTCCTTAGGTGTTTTCCAGAGGTTGAGACACTACATATAACTAGCAAAACGGACAAGGCTTCAGAAGCCGAACAATTCAGTTTCTGGGGAAAGGTTGATCCTGTTGAGTGTGTGACCTCTCATCTCAAGAAGTTAGTGTTCCATGGGATGCCATGGTGTCCTGGAAACCTTGAGTTTCTCAAATTCATCGTGGAAGGGGCATACTTGCTAGAGAAGGTGTTGATTGTTCTTCCTAAAGGAACTTACACTAGCATGCATAGCGTTATCACCAAACTCAAGTTAGCACCTTTGACCTCTGCAAGTTGGGCTAGTCACATCTGTAAAATGGAGGTTGTCCAATCCAGTCAAGGAACTTTGAGCTACCAAAGGGCATCTGATCATTCCGTCGATGATCCTTTAGATTATTCCCTGTAG
Protein Sequence
- >LOC_Os01g39670.1
MEAVIAECRPKPLFTTGPFLSAVGGGGGGVDRISGLPDDLLFVILSKLPVRDAVATSALSPRWKSLWSSVPLRLDDAGLLHRRDGTRLGREGVAATVSAVLAAHPGPVPAASVGCCLSSDDQGYQLGGWLRALAAKGVRQLCLMGAPWSPRAALPSAVFSCSSLRRLFLGSVQCNWDLIPDHACFPELREIQICNALMKSQDLSLVLAVCPALETVEILASRNKIPTVRMSSHTIRNTLLWKSVAKEVNVLDTPCLSRVVLWQDLLLPHSRYNSKVTISRATKMRISGYLDTGINTLVINETTVKVNTNISFKTLIPSVKVLGLSVHFGVRKEALMSISFLRCFPEVETLHITSKTDKASEAEQFSFWGKVDPVECVTSHLKKLVFHGMPWCPGNLEFLKFIVEGAYLLEKVLIVLPKGTYTSMHSVITKLKLAPLTSASWASHICKMEVVQSSQGTLSYQRASDHSVDDPLDYSL*