Gene Details:
- MSU gene ID: LOC_Os01g37510
- RAPdb gene ID: Os01g0555800
- Gene Symbol: OsPDF1A
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Transient expression of PDF-green fluorescent protein (GFP) fusion proteins in the protoplasts demonstrates that, unlike OsPDF1A, OsPDF1B is localized in both the chloroplasts and the mitochondria.
- OsPDF1A is more strongly expressed in the roots, while OsPDF1B is expressed at higher levels in mature leaves.
Function-related keywords:
Literature:
- Rice peptide deformylase PDF1B is crucial for development of chloroplasts . DOI: 10.1093/pcp/pcn121 ; PMID: 18718933
Related News:
Gene Resources:
- NCBI ID: EU213045
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os01g37510.1
GCGAGATGGAAGCTCACCTCCGGCCGCTCTCCGCCGCGGCGCTCCTCCTTTCCCCCGCTGCGCCGCTTCCCACCGCCGTTGCTGCTTCTGCGAGGAGAGCATCCCCCGGTGGCAGGAGGTGGAGCAGCGTGAGGGCCAGCGCGGGCGGCGGGGGCTGGCTGTCGGGCCTGCTCGGAGGCAAGGGCGGCGGCGGCGCGCCGACGGCGATGACGGTGACGCCGGGGACCGTGAAGGCGGGGGACCCCGTCCTGCACGAGCCGGCTCAGGACGTTGCCCCCGGGGACATCCCCTCGGAGAAGGTCCAGGGCGTCATCGACCGGATGGTCGCCGTCATGCGCAAGGCCCCCGGCGTCGGCCTCGCCGCCCCGCAGATCGGCGTCCCCTTGAAGATTATCGTCCTGGAGGATACCCAAGAATACATCAGCTATGCTCCCAAGAAGGACATTGAAGCGCAGGATCGCCGTCCTTTCGATCTTCTTGTTATCATCAATCCTAAGCTTAAGACGACGAGTAAAAGAACTGCATTGTTCTTCGAGGGGTGTTTGAGTGTAGATGGATACAGGGCACTTGTCGAGCGACACCTGGATGTTGAGGTTTCAGGTTTGGACAGGAATGGACGCCCCATCAAGGTAGAAGCTTCAGGATGGCAGGCACGTATCCTGCAGCACGAATGTGATCATCTTGAAGGTACATTGTATGTTGACACGATGGTCCCTAGGACATTCAGAATTGTTGATAACTTGGATCTTCCGCTTCCTGTTGGATGCCCTCCAATAGGTGCACGCTGAGGTGGAGAGCATTCCACATTTTAAAATTTCCAAGTAGAGATAATTGCACTCTATAGTATACATAAAATTTATCCCAAGTATAATATTTGCATTGCTGCTTATTTCTGTGATTGCCAATTTTCCATGAATTGATTTTTCAATGTCTGTTGTGGTCATACACATGCGGAGAATCACTGCCTTGTATGTTGAATTGACATCATGTGGTAACATTCGTTGTTGGTTGTAAGATGTTCGCTCAATGTTTTTTGTATGGTGTCCATGGACTCTGGGAGAACAGGAATTTTACACTTCAATAGAACTGTACCTTTTCCTCCAGTTTTTGTCTCTTCAACATAATTTGCAATACCATACACTTAATAGTGTATACTGATTATTTTTATCATA
CDS Sequence
- >LOC_Os01g37510.1
ATGGAAGCTCACCTCCGGCCGCTCTCCGCCGCGGCGCTCCTCCTTTCCCCCGCTGCGCCGCTTCCCACCGCCGTTGCTGCTTCTGCGAGGAGAGCATCCCCCGGTGGCAGGAGGTGGAGCAGCGTGAGGGCCAGCGCGGGCGGCGGGGGCTGGCTGTCGGGCCTGCTCGGAGGCAAGGGCGGCGGCGGCGCGCCGACGGCGATGACGGTGACGCCGGGGACCGTGAAGGCGGGGGACCCCGTCCTGCACGAGCCGGCTCAGGACGTTGCCCCCGGGGACATCCCCTCGGAGAAGGTCCAGGGCGTCATCGACCGGATGGTCGCCGTCATGCGCAAGGCCCCCGGCGTCGGCCTCGCCGCCCCGCAGATCGGCGTCCCCTTGAAGATTATCGTCCTGGAGGATACCCAAGAATACATCAGCTATGCTCCCAAGAAGGACATTGAAGCGCAGGATCGCCGTCCTTTCGATCTTCTTGTTATCATCAATCCTAAGCTTAAGACGACGAGTAAAAGAACTGCATTGTTCTTCGAGGGGTGTTTGAGTGTAGATGGATACAGGGCACTTGTCGAGCGACACCTGGATGTTGAGGTTTCAGGTTTGGACAGGAATGGACGCCCCATCAAGGTAGAAGCTTCAGGATGGCAGGCACGTATCCTGCAGCACGAATGTGATCATCTTGAAGGTACATTGTATGTTGACACGATGGTCCCTAGGACATTCAGAATTGTTGATAACTTGGATCTTCCGCTTCCTGTTGGATGCCCTCCAATAGGTGCACGCTGA
Protein Sequence
- >LOC_Os01g37510.1
MEAHLRPLSAAALLLSPAAPLPTAVAASARRASPGGRRWSSVRASAGGGGWLSGLLGGKGGGGAPTAMTVTPGTVKAGDPVLHEPAQDVAPGDIPSEKVQGVIDRMVAVMRKAPGVGLAAPQIGVPLKIIVLEDTQEYISYAPKKDIEAQDRRPFDLLVIINPKLKTTSKRTALFFEGCLSVDGYRALVERHLDVEVSGLDRNGRPIKVEASGWQARILQHECDHLEGTLYVDTMVPRTFRIVDNLDLPLPVGCPPIGAR*